Hello, After reinstalling the whole OS and R as well, I tried to update.packages() and get the follwing error message: concerning the mgcv update: atlas2-base is installed and blas as well (on debian). I haven't found lf77blas, I assume it's a library or something similar associated with blas. any suggestion how to solve that, thanks Martin * Installing *source* package 'cluster' ... ** libs gcc -I/usr/lib/R/include -D__NO_MATH_INLINES -mieee-fp -fPIC -g -O2 -c clara.c -o clara.o g77 -mieee-fp -fPIC -g -O2 -c daisy.f -o daisy.o make: g77: Command not found make: *** [daisy.o] Error 127 ERROR: compilation failed for package 'cluster' * Installing *source* package 'mgcv' ... ** libs gcc -I/usr/lib/R/include -D__NO_MATH_INLINES -mieee-fp -Wall -pedantic -fPIC -g -O2 -c gcv.c -o gcv.o gcc -I/usr/lib/R/include -D__NO_MATH_INLINES -mieee-fp -Wall -pedantic -fPIC -g -O2 -c magic.c -o magic.o gcc -I/usr/lib/R/include -D__NO_MATH_INLINES -mieee-fp -Wall -pedantic -fPIC -g -O2 -c mat.c -o mat.o gcc -I/usr/lib/R/include -D__NO_MATH_INLINES -mieee-fp -Wall -pedantic -fPIC -g -O2 -c matrix.c -o matrix.o gcc -I/usr/lib/R/include -D__NO_MATH_INLINES -mieee-fp -Wall -pedantic -fPIC -g -O2 -c mgcv.c -o mgcv.o gcc -I/usr/lib/R/include -D__NO_MATH_INLINES -mieee-fp -Wall -pedantic -fPIC -g -O2 -c qp.c -o qp.o gcc -I/usr/lib/R/include -D__NO_MATH_INLINES -mieee-fp -Wall -pedantic -fPIC -g -O2 -c tprs.c -o tprs.o gcc -shared -o mgcv.so gcv.o magic.o mat.o matrix.o mgcv.o qp.o tprs.o -L/usr/lib/R/bin -lRlapack -lf77blas -latlas -L/usr/lib/gcc-lib/i386-linux/3.3 -L/usr/lib/gcc-lib/i386-linux/3.3/../../.. -lfrtbegin -lg2c-pic -lm -lgcc_s -L/usr/lib/R/bin -lR /usr/bin/ld: cannot find -lf77blas collect2: ld returned 1 exit status make: *** [mgcv.so] Error 1 ERROR: compilation failed for package 'mgcv' Delete downloaded files (y/N)? y Warning messages: 1: Installation of package cluster had non-zero exit status in: install.packages(update[, "Package"], instlib, contriburl = contriburl, 2: Installation of package mgcv had non-zero exit status in: install.packages(update[, "Package"], instlib, contriburl = contriburl,>
Martin Wegmann wrote:> Hello, > > After reinstalling the whole OS and R as well, I tried to update.packages() > and get the follwing error message: > > concerning the mgcv update: atlas2-base is installed and blas as well (on > debian). I haven't found lf77blas, I assume it's a library or something > similar associated with blas. > > any suggestion how to solve that, thanks Martin > > > * Installing *source* package 'cluster' ... > ** libs > gcc -I/usr/lib/R/include -D__NO_MATH_INLINES -mieee-fp -fPIC -g -O2 -c > clara.c -o clara.o > g77 -mieee-fp -fPIC -g -O2 -c daisy.f -o daisy.o > make: g77: Command not found > make: *** [daisy.o] Error 127 > ERROR: compilation failed for package 'cluster'The Fortran Compiler g77 is missing (at least not in your path), as well as some related libraries (see error message below). Uwe Ligges> * Installing *source* package 'mgcv' ... > ** libs > gcc -I/usr/lib/R/include -D__NO_MATH_INLINES -mieee-fp -Wall -pedantic > -fPIC -g -O2 -c gcv.c -o gcv.o > gcc -I/usr/lib/R/include -D__NO_MATH_INLINES -mieee-fp -Wall -pedantic > -fPIC -g -O2 -c magic.c -o magic.o > gcc -I/usr/lib/R/include -D__NO_MATH_INLINES -mieee-fp -Wall -pedantic > -fPIC -g -O2 -c mat.c -o mat.o > gcc -I/usr/lib/R/include -D__NO_MATH_INLINES -mieee-fp -Wall -pedantic > -fPIC -g -O2 -c matrix.c -o matrix.o > gcc -I/usr/lib/R/include -D__NO_MATH_INLINES -mieee-fp -Wall -pedantic > -fPIC -g -O2 -c mgcv.c -o mgcv.o > gcc -I/usr/lib/R/include -D__NO_MATH_INLINES -mieee-fp -Wall -pedantic > -fPIC -g -O2 -c qp.c -o qp.o > gcc -I/usr/lib/R/include -D__NO_MATH_INLINES -mieee-fp -Wall -pedantic > -fPIC -g -O2 -c tprs.c -o tprs.o > gcc -shared -o mgcv.so gcv.o magic.o mat.o matrix.o mgcv.o qp.o tprs.o > -L/usr/lib/R/bin -lRlapack -lf77blas -latlas > -L/usr/lib/gcc-lib/i386-linux/3.3 -L/usr/lib/gcc-lib/i386-linux/3.3/../../.. > -lfrtbegin -lg2c-pic -lm -lgcc_s -L/usr/lib/R/bin -lR > /usr/bin/ld: cannot find -lf77blas > collect2: ld returned 1 exit status > make: *** [mgcv.so] Error 1 > ERROR: compilation failed for package 'mgcv' > > Delete downloaded files (y/N)? y > > Warning messages: > 1: Installation of package cluster had non-zero exit status in: > install.packages(update[, "Package"], instlib, contriburl = contriburl, > 2: Installation of package mgcv had non-zero exit status in: > install.packages(update[, "Package"], instlib, contriburl = contriburl, > > > ______________________________________________ > R-help at stat.math.ethz.ch mailing list > https://www.stat.math.ethz.ch/mailman/listinfo/r-help
On Tue, Sep 30, 2003 at 12:41:07PM +0200, Martin Wegmann wrote:> concerning the mgcv update: atlas2-base is installed and blas as well (on > debian). I haven't found lf77blas, I assume it's a library or something > similar associated with blas. > > any suggestion how to solve that, thanks MartinYou need to add atlas2-base-dev: $ apt-get install atlas2-base-dev Dirk -- Those are my principles, and if you don't like them... well, I have others. -- Groucho Marx