similar to: cluster & mgcv update

Displaying 20 results from an estimated 3000 matches similar to: "cluster & mgcv update"

2003 Nov 25
1
Something broken with update?
Updating my 1.8.0 R installation (>update.packages() ) I obtain the following (SORRY FOR THE LENGTH OF THE LOG BUT IT HELPS!!!): ................ downloaded 135Kb KernSmooth : Version 2.22-11 in /usr/lib/R/library Version 2.22-12 on CRAN Update (y/N)? y mgcv : Version 0.9-3.1 in /usr/lib/R/library Version 0.9-6 on CRAN Update (y/N)? y trying URL
2004 Jun 10
3
Package installation
Hi all, I'm very new to R. I have installed R 1.9.0 on Linux (Fedora). Now I got an self-made package comprising R functions as well as C-Code which are used in several R functions. I installed the package without any error (see install log below). Then, I checked in /usr/lib/R/library if the package izbi exists and it exists. But whenever I try to load the library on the command line I
2004 May 31
1
e1071 build issue
** save image Error in loadNamespace(i[[1]], c(lib.loc, .libPaths()), keep.source) : There is no package called 'class' Using 30 May 2004 developer version of R-1.9.0 trying URL `http://cran.r-project.org/src/contrib/e1071_1.4-0.tar.gz' Content type `application/x-tar' length 325388 bytes opened URL .......... .......... .......... .......... .......... ..........
2000 Dec 19
1
packages installation failed on Linux
Hi all, I've successfully compiled R-1.2 on a Linux box (Mandrake 7.1). However, when I installed packages from sources, I run into problems with the packages logspline and tseries. The error messages are as follows. Can anyone help? The compiler is gcc 2.95.3, if that helps. Andy ================================================ Installing source package `logspline' ... libs gcc
2003 Sep 24
1
SJava help
Hi, I installed SJava 0.66-1 on my linux RH 7.2 machine. I am using R-1.7.1. I set LD_LIBRARY_PATH up then called library(SJava) and it was fine. But when I called .JavaInit(), I got weird error that states it could not find java/lang/Hashtable. The session is below and shows my java configuration. I am using j2sdk1.4.2_01 from Sun. Thank you very much. Weiming Zhang > .javaConfig
2008 Dec 09
1
update.packages() for R 2.7.1: mgcv fails
Hi I just upgraded my debian/stable to R 2.7.1 via apt-get install r-base r-base-core r-base-dev, and then began to update.packages() > update.packages(lib.loc="/usr/local/lib/R/site-library") > update.packages(lib.loc="/usr/lib/R/library") but I get: .... * Installing *source* package 'mgcv' ... ** libs gcc -std=gnu99 -I/usr/share/R/include -fpic -g
2004 Apr 07
1
installing RMySQL
Hi, I have problems installing RMySQL under R1.8.1 and RHlinux (kernel2.4.7). During compilation I get: ** libs gcc -I/usr/lib/R/include -I/usr/include/mysql -I/usr/local/include -D__NO_MATH_INLINES -mieee-fp -fPIC -O2 -m486 -fno-strength-reduce -g -c RS-DBI.c -o RS-DBI.o gcc -I/usr/lib/R/include -I/usr/include/mysql -I/usr/local/include -D__NO_MATH_INLINES -mieee-fp -fPIC -O2 -m486
2003 Nov 11
2
Compilation problem SuSE 9.0
Hi I have problem running R (tried 1.8.0 and 1.7.1) under a fresh installed SuSE 9.0 using default settings: I'm not able to send plots to the monitor. Only postscript graphs are produced in external files. When assigning options(device='X11') and then plotting I get the message "Error in X11() : X11 is not available". Since this occured using the r-cran binary I tried
2003 Nov 19
1
RMySQL_5.2 SuSE9.0
Hi, i try to install, but getting no success. What this mean cannot find -lz , any necessary lib left in my SuSE Installation? Many thanks, Christian linux:/usr/lib/R/bin # R CMD INSTALL RMySQL_0.5-2.tar.gz * Installing *source* package 'RMySQL' ... creating cache ./config.cache checking how to run the C preprocessor... cc -E checking for mysql_init in -lmysqlclient... yes checking
2002 Jun 03
1
build fails dumping R code in 'methods' on i686-pc-linux-gnu (PR#1630)
Using the same settings in config.site as were used for R-1.4.1, R-1.5.0 fails to build. ./configure --enable-R-shlib Using defaults and using PPro optimizations, the build failed in package methods: dumping R code in package 'methods' gmake[4]: *** [../../../library/methods/R/all.rda] Error 139 gmake[4]: Leaving directory `/mnt/Data/src/install/R-1.5.0/src/library/methods' The
2003 Mar 17
1
RMySQL Install Problem
Hey all, I asked my server administrator to install the RMySQL package for me however he was unable to and received the below errors. I searched the archives for some of the words in the error mesage but found no answers. Does anyone have any ideas what might be going wrong? This is R 1.6.2 on a linux box. Thanks, Fred > install.packages("RMySQL") trying URL
2004 Aug 20
1
gcc optimization flag when building R
Hi, I am building R on RH Linux 7.3 and I noticed that ./configure does not set the optimization flag, -O or -O2, for gcc, but does set for g++ and g77. Why is that? Should I try to set it manually, if yes how? Thanks, Vadim P.S. This is the bottom portion of the ./configure run R is now configured for i686-pc-linux-gnu Source directory: . Installation directory:
2002 Jan 24
2
R-gnome: no way to configure
Hi! I've been able to configure and make R (1,4,0 linux) except for the gnome support. I've checked all packages and libs mentioned in R-admin.pdf (and by Luke Tierny) to make sure that I have them and even using the following: ./configure --with-gnome --with-gnome-includes=/opt/gnome/include --with-gnome-libs=/opt/gnome/lib --with-libglade-config=opt/gnome/lib I still get: R is now
2001 Nov 09
1
Installing packages
Hello, I have upgraded from Mandrake Linux 8.0 to Mandrake 8.1 and try to reinstall my favourite R... Everything is OK for the base software but I have trouble to get some packages installed. Specifically, for some packages, a "collect2" binary seems to be necessary during the compilation/linking process of the library, and LD complains about not finding it : Installing source
2012 Feb 13
3
mgcv: increasing basis dimension
hi Using a ts or tprs basis, I expected gcv to decrease when increasing the basis dimension, as I thought this would minimise gcv over a larger subspace. But gcv increased. Here's an example. thanks for any comments. greg #simulate some data set.seed(0) x1<-runif(500) x2<-rnorm(500) x3<-rpois(500,3) d<-runif(500) linp<--1+x1+0.5*x2+0.3*exp(-2*d)*sin(10*d)*x3
2005 Aug 23
1
ROracle installation problem
Hi there, I am trying to install ROracle but I get this error. I have an error in reconcilePropertiesAndPrototype. (My LD_LIBRARY_PATH is set with the oracle lib) Thanks, Mathieu # R CMD INSTALL --configure-args='--enable-extralibs' ../ROracle_0.5-5.tar.gz * Installing *source* package 'ROracle' ... creating cache ./config.cache checking how to run the C preprocessor... cc -E
2004 Nov 06
3
Installing Packages on an Athlon 64 Linux System
I installed FC 2 X86-64 on an Athlon 64 system. I then installed R 2.0.0. It runs fine except when I try to install or update packages using either "install.packages" or "update.packages". I get the following types of errors: gcc -I/usr/lib/R/include -I/usr/local/include -D__NO_MATH_INLINES -mieee-fp -fPIC -O2 -g -pipe -march=i386 -mcpu=i686 -c block.c -o block.o cc1:
2001 Nov 12
2
Announcement: Automatic ATLAS support under Debian GNU/Linux
[ If this is considered off-topic please let me know in private mail. ] With the current version of the glibc library in Debian's "testing" and "unstable" distributions, ldconfig now loads the ATLAS optimised BLAS without any user intervention beyond installation of the Atlas and R or Octave packages. ATLAS can lead to very dramatic speed increases (up to a factor of ten,
2004 Nov 01
2
Compilation error on mgcv_1.1-7 on OS X (10.3)
Greetings I run into a compilation error when updating to mgcv_1.1-7 in R 2.0.0 on OS X 10.3. Note that other pacakges have compiled nicely. Some details are given below, but in short it looks like it's seeking for /usr/local/lib/powerpc-apple-darwin6.8/3.4.2/ which I don't have. But I do have /usr/lib/gcc/darwin/3.3 i.e a lower version of GCC in a different directory. More
2001 Sep 26
2
installing RMySQL
Hi, I have struggled to re-implement the RMySQL package after upgrading from SuSe 6.3 to 7.2 and from R 1.2.1 to R 1.3.1, to no avail It compiles happily but when loading the package I get the following error > library(RMySQL) Error in dyn.load(x, as.logical(local), as.logical(now)) : unable to load shared library "/home/jniesch/R_HOME/lib/R/library/RMySQL/libs/RMySQL.so":