search for: contriburl

Hi! As per Thomas' advice, I upgraded R by using "update.packages()" and got the following warning messages: Warning messages: 1: installation of package 'lmtest' had non-zero exit status in: install.packages(update[, "Package"], instlib, contriburl = contriburl, 2: installation of package 'quadprog' had non-zero exit status in: install.packages(update[, "Package"], instlib, contriburl = contriburl, 3: installation of package 'cluster' had non-zero exit status in: install.packages(update[, "Package"], instli...

...ength (arg 1) in: cbind(1, pkgs, lib) 2: number of rows of result is not a multiple of vector length (arg 2) in: cbind(1, update[found, , drop = FALSE], file = files) 3: installation of package 'chron' had non-zero exit status in: install.packages(update[, "Package"], instlib, contriburl = contriburl, 4: installation of package 'VR' had non-zero exit status in: install.packages(update[, "Package"], instlib, contriburl = contriburl, 5: installation of package 'dse' had non-zero exit status in: install.packages(update[, "Package"], instlib, contr...

Dear list members, I can't figure out how to specify the contriburl argument to install.packages() properly when the packages to be installed are in a directory on my local machine. I have in mind a command something like install.packages(missing.packages, contriburl=directory, lib=.libPaths()[1]) Where missing.packages is a character vector of package names (wi...

...;hs95av2hs3ug6cdf_6.0.0.tar.gz/DESCRIPTION' >traceback() 5: gzfile(file, "r") 4: read.dcf(file.path(curPkg, "DESCRIPTION"), c("Package", "Version")) 3: unpackPkg(pkgs[i], pkgnames[i], lib, installWithVers) 2: .install.macbinary(pkgs = pkgs, lib = lib, contriburl = contriburl, method = method, available = available, destdir = destdir, installWithVers = installWithVers, dependencies = dependencies) 1: install.packages("hs95av2hs3ug6cdf_6.0.0.tar.gz", repos = NULL, method = "source") 2) the code in the above thread d...

...ackages.R adding one line and moving another one. Here's the diff output --- install.packages.R 2004-10-02 19:07:34.000000000 +0200 +++ install.packages.modified.R 2004-10-22 18:22:01.275986160 +0200 @@ -25,9 +25,9 @@ } if(is.null(available)) available <- CRAN.packages(contriburl = contriburl, method = method) + have <- .packages(all.available = TRUE) if(dependencies) { # check for dependencies, recursively p0 <- p1 <- unique(pkgs) # this is ok, as 1 lib only - have <- .packages(all.available = TRUE) repeat { if(any...

...number of the additional R packages using synaptic which reported no errors but when I run my first update.packages() as an ordinary user I get this: The downloaded packages are in ?/tmp/Rtmp9LYziU/downloaded_packages? Warning in install.packages(update[instlib == l, "Package"], l, contriburl = contriburl, : 'lib = "/usr/lib/R/library"' is not writable Error in install.packages(update[instlib == l, "Package"], l, contriburl = contriburl, : unable to install packages In addition: Warning messages: 1: In install.packages(update[instlib == l, "Pack...

Had some packages fail install so I updated to today's R-beta release. On updating packages the following packages still fail. sessionInfo follows. Mark Warning messages: 1: In install.packages(update[instlib == l, "Package"], l, contriburl = contriburl, : installation of package 'MANOR' had non-zero exit status 2: In install.packages(update[instlib == l, "Package"], l, contriburl = contriburl, : installation of package 'qvalue' had non-zero exit status 3: In install.packages(update[instlib == l, &q...

Dear R-list, I have encountered the following error message trying to update R packages: > update.packages(ask='graphics') Warning in install.packages(update[instlib == l, "Package"], l, contriburl = contriburl, : 'lib' is not writable Error in install.packages(update[instlib == l, "Package"], l, contriburl = contriburl, : unable to install packages I remember did not have the problem on the last update where R installed the files then in the Documents/R...

...4-04-12), ISBN 3-900051-00-3 > file.pkg <- "mypkg_0.1.tar.gz" > path.pkg <- file.path(path.expand("~"), "cvknn", file.pkg) > file.exists(path.pkg) [1] TRUE > uri.pkg <- paste("file://", path.pkg, sep = "") > install.packages(contriburl = uri.pkg, lib = Sys.getenv("R_LIBS")) Error in file.info(x) : Object "tmpd" not found > traceback() 4: file.info(x) 3: dirTest(destdir) 2: download.packages(pkgs, destdir = tmpd, available = available, contriburl = contriburl, method = method) 1: install.packages(cont...

...104.24.156) The following error is produced when attempting to call install.packages. Here is the results of the traceback: > source('http://openmx.psyc.virginia.edu/getOpenMx.R') Error in f(res) : invalid subscript type 'list' > traceback() 7: f(res) 6: available.packages(contriburl = contriburl, method = method) 5: .install.winbinary(pkgs = pkgs, lib = lib, contriburl = contriburl, method = method, available = available, destdir = destdir, dependencies = dependencies, ...) 4: install.packages(pkgs = c("OpenMx"), repos = repos) 3: eval.with.vis(expr,...

...ror and R detected the few packages that needed to be updated. After I clicked on OK I got the following error message: > update.packages(ask='graphics') --- Please select a CRAN mirror for use in this session --- Warning in install.packages(update[instlib == l, "Package"], l, contriburl = contriburl, : 'lib = "C:/PROGRA~2/R/R-211~1.1/library"' is not writable Error in install.packages(update[instlib == l, "Package"], l, contriburl = contriburl, : unable to install packages I've tried several times, then uninstalled R and reinstalled it. Same...

...stall r-base which worked fine, installing all dependencies From R, as root, I did update.packages() but a number of packages packages failed to install, either for missing gfortran or missing dependencies. Warning messages: 1: In install.packages(update[instlib == l, "Package"], l, contriburl = contriburl, : installation of package 'maptools' had non-zero exit status 2: In install.packages(update[instlib == l, "Package"], l, contriburl = contriburl, : installation of package 'mvtnorm' had non-zero exit status 3: In install.packages(update[instlib == l,...

...r68681) nickname World-Famous Astronaut I have the options below: options(pkgType='binary') options(install.packages.check.source='no') For some, but not allI repositories I get the error message below: Error in install.packages(update[instlib == l, "Package"], l, contriburl = contriburl, : specifying 'contriburl' or 'available' requires a single type, not type = "both" Is it a bug? Best, ///\\\///\\\///\\\///\\\///\\\///\\\///\\\///\\\ Jose Claudio Faria Estatistica UESC/DCET/Brasil joseclaudio.faria at gmail.com Telefones: 55(73)3680.55...

Hi, I run windows vista ultimate in my laptop and run R 2.5 I am trying to update the packages but it comes up with an error message ""Warning in install.packages(update[instlib == l, "Package"], l, contriburl = contriburl, : 'lib' is not writable Error in install.packages(update[instlib == l, "Package"], l, contriburl = contriburl, : unable to install packages" I am the adminsitrator on this computer and logged in as administrator. can anyone advise. I treid...

Hi All: I tried to update the package mgcv from my current version 1.1-8 to mgcv version 1.2. Using the command update.packages("mgcv") to update mgcv failed in my computer and the returning message was: "Error in old.packages(lib.loc=lib.loc, contriburl=contriburl, method=method, :no installed.packages for (?invalid) lib.loc=mgcv" When I typed installed.packages(), I got the following information libpath = "/usr/local/lib/R/site-library" for the installed package "mgcv". My next error was when I typed update.packages(&...

...RUE, ask=FALSE) ras also recommended and selected the NS Cran mirror. On doing this the following error messages occurs: update.packages(checkBuilt=TRUE, ask=FALSE) --- Please select a CRAN mirror for use in this session --- Warning in install.packages(update[instlib == l, "Package"], l, contriburl = contriburl, : 'lib = "C:/Program Files/R/R-2.13.1/library"' is not writable Error in install.packages(update[instlib == l, "Package"], l, contriburl = contriburl, : unable to install packages Any suggestions as to how to correct this problem would be appreciat...

To whom it concenrt I am trying to update the R program 2.9 This is the message that the program give is: > update.packages(ask='graphics') Warning in install.packages(update[instlib == l, "Package"], l, contriburl = contriburl, : 'lib = "C:/PROGRA~1/R/R-29~1.0/library"' is not writable Erro em install.packages(update[instlib == l, "Package"], l, contriburl = contriburl, : unable to install packages I will wait for answer about this. Sicerelly -- MSc. Gilson Sánchez Chia...

I have been trying to update some R packages but I get the following error. Can you advise how mow to get around this . I am using the R for 64 bit windows. --- Please select a CRAN mirror for use in this session --- Warning in install.packages(update[instlib == l, "Package"], l, contriburl = contriburl, : 'lib = "C:/PROGRA~1/R/R-211~1.1-X/library"' is not writable Error in install.packages(update[instlib == l, "Package"], l, contriburl = contriburl, : unable to install packages -- Thanks, Jim. [[alternative HTML version deleted]]

...g Linux Ubuntu and tried to update my packages using the update.package() command. It appeared to download the updates ok but I got the following message: The downloaded packages are in ?/tmp/RtmpFM82Ry/downloaded_packages? Warning in install.packages(update[instlib == l, "Package"], l, contriburl = contriburl, : 'lib = "/usr/lib/R/site-library"' is not writable Error in install.packages(update[instlib == l, "Package"], l, contriburl = contriburl, : unable to install packages Calls: update.packages -> install.packages What does this mean ? And more impo...

I tried to update my packages using update.packages() I got the following message: The downloaded packages are in ?/tmp/RtmpyDYdTX/downloaded_packages? Warning in install.packages(update[instlib == l, "Package"], l, contriburl = contriburl, : 'lib = "/usr/lib/R/library"' is not writable Error in install.packages(update[instlib == l, "Package"], l, contriburl = contriburl, : unable to install package How do I fix this ? -- View this message in context: http://r.789695.n4.nabble.com/pac...