Hi, I have researched batch mode for windows and could not find anything that worked. I know the code should be $ R CMD BATCH inputfile.R outputfile.Rout or R <inputfile.R > outputfile.Rout I tried these without success. I need detailed, step by step instructions on how to do this. I have tried typing C:\R\bin\x64\Rgui.exe before it, but this just opens R. When I tried to do this, it said that $, R, etc. are not recognizable commands. In other instances it said that the arguments R, CMD, and BATCH were ignored. What specifically should I do to make this work? I thought I was supposed to change the directory to the folder where my input file was stored, but this did not work either. -- View this message in context: http://r.789695.n4.nabble.com/Batch-Mode-for-Windows-tp4639977.html Sent from the R help mailing list archive at Nabble.com.
Hi Here is a script I have used sometime ago to do a job i cannot remember what Windows OS it was. the first line is the general form # R CMD BATCH [options] infile [outfile] c:\rw\bin\R CMD BATCH --no-restore --no-save D:/Feh/R/FEH_Index_in.R D:/Feh/R/FEH_Batch.txt the FEH_Batch.txt is the log file for the batch HTH Duncan Duncan Mackay Department of Agronomy and Soil Science University of New England Armidale NSW 2351 Email: home: mackay at northnet.com.au At 06:59 11/08/2012, you wrote:>Hi, I have researched batch mode for windows and could not find anything that >worked. >I know the code should be > >$ R CMD BATCH inputfile.R outputfile.Rout >or >R <inputfile.R > outputfile.Rout > >I tried these without success. I need detailed, step by step instructions on >how to do this. I have tried typing C:\R\bin\x64\Rgui.exe before it, but >this just opens R. > >When I tried to do this, it said that $, R, etc. are not recognizable >commands. In other instances it said that the arguments R, CMD, and BATCH >were ignored. What specifically should I do to make this work? I thought I >was supposed to change the directory to the folder where my input file was >stored, but this did not work either. > > > >-- >View this message in context: >http://r.789695.n4.nabble.com/Batch-Mode-for-Windows-tp4639977.html >Sent from the R help mailing list archive at Nabble.com. > >______________________________________________ >R-help at r-project.org mailing list >https://stat.ethz.ch/mailman/listinfo/r-help >PLEASE do read the posting guide http://www.R-project.org/posting-guide.html >and provide commented, minimal, self-contained, reproducible code.
On 10.08.2012 22:59, sharx wrote:> Hi, I have researched batch mode for windows and could not find anything that > worked. > I know the code should be > > $ R CMD BATCH inputfile.R outputfile.Rout > or > R <inputfile.R > outputfile.RoutAlmost right, see below.> I tried these without success. I need detailed, step by step instructions on > how to do this. I have tried typing C:\R\bin\x64\Rgui.exe before it, but > this just opens R. > > When I tried to do this, it said that $$ indicates you shoudl thpy in the OS shell. Do not repeat that one when typing commands.> , R, etc. are not recognizableIn that case, you have not added the directory where R.exe lives to the PATH environment variable. Uwe Ligges> commands. In other instances it said that the arguments R, CMD, and BATCH > were ignored. What specifically should I do to make this work? I thought I > was supposed to change the directory to the folder where my input file was > stored, but this did not work either. > > > > -- > View this message in context: http://r.789695.n4.nabble.com/Batch-Mode-for-Windows-tp4639977.html > Sent from the R help mailing list archive at Nabble.com. > > ______________________________________________ > R-help at r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. >
I have a batch file to run R commands in a text file and an output file that I
use.
"C:\Program Files\R\R-2.13.2\bin\x64\R.exe" CMD BATCH
"C:\Users\Frank\Documents\R\Scripts\TLT_2012.txt"
"C:\Users\Frank\Documents\R\Scripts\TLT_2012.out"
PAUSE
I worked in an environment that you had to fully specify a path, hence
"C:\Program Files\R\R-2.13.2\bin\x64\R.exe"
which I continue as a personal "best practices."
TLT_2012.txt starts with
colors <- c("red", "blue", "darkgreen",
"gold", "black")
labels <- c("8/11/2011","11/3/2011",
"2/28/2012", "5/9/2012")
pdf("C:\\Users\\Frank\\Documents\\R\\Scripts\\TLT_2012.pdf")
.
.
.
TLT_2012.out contains the R output and in particular the errors and warnings. I
always consult the .out file first since I usually have errors :).
Best,
Frank
Chicago, IL
> Date: Fri, 10 Aug 2012 13:59:34 -0700
> From: sxu12@mtlakes.org
> To: r-help@r-project.org
> Subject: [R] Batch Mode for Windows
>
> Hi, I have researched batch mode for windows and could not find anything
that
> worked.
> I know the code should be
>
> $ R CMD BATCH inputfile.R outputfile.Rout
> or
> R <inputfile.R > outputfile.Rout
>
> I tried these without success. I need detailed, step by step instructions
on
> how to do this. I have tried typing C:\R\bin\x64\Rgui.exe before it, but
> this just opens R.
>
> When I tried to do this, it said that $, R, etc. are not recognizable
> commands. In other instances it said that the arguments R, CMD, and BATCH
> were ignored. What specifically should I do to make this work? I thought I
> was supposed to change the directory to the folder where my input file was
> stored, but this did not work either.
>
>
>
> --
> View this message in context:
http://r.789695.n4.nabble.com/Batch-Mode-for-Windows-tp4639977.html
> Sent from the R help mailing list archive at Nabble.com.
>
> ______________________________________________
> R-help@r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide
http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.
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