Seth Falcon
2005-Mar-30 18:05 UTC
[BioC] Follow-up to: [R] Annotation metadata "kills" help.search
"Gerard Tromp" <gerard.tromp at sanger.med.wayne.edu> writes:> Greetings, > > this is a follow-up to the mailing below. Seth Falcon replied and indicated > that he and several others were unable to replicate the problem. > Specifically he requested: > > ===========> We are not able to reproduce this issue. If you reinstall the > annotation packages does the error reappear? > > If so, an exact transcript of the commands entered, their output, and > the output of traceback() right after the error would be helpful --- > and it would be best to move the discussion to the bioconductor list. > ======> > The answers are: Yes, the problem is reproducible. I did a complete > reinstall of R and bioconductor end everything worked fine until I installed > an annotation package.With the added information from Gerard, we were able to reproduce the problem and are currently working on a fix. Thanks, + seth
Seth Falcon
2005-Mar-30 20:56 UTC
[BioC] Follow-up to: [R] Annotation metadata "kills" help.search
Hello Gerard, all, The annotation packages breaking help.search was due to improperly built annotation packages. We have posted updated annotation packages to the Bioconductor meta data repository. Reinstalling the annotation data packages should resolve the issue and allow help.search to function normally. Please let us know (on bioconductor at stat.math.ethz.ch) if you find otherwise. Thanks, + seth
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