On Mon, Dec 02, 2002 at 03:34:02PM +0100, AlessandroSemeria at cramont.it
wrote:> Hello! I don't know if there is some R-package able
> to associate ontology to a long list of UniGene Name (a txt-tab file or
> an XML file), or
> if the best way is a Perl script.
> Some suggestion? Thanks!
It depends on where the UniGene names come from and whether we have
already done a mapping (for example if they were from some commonly
used Affymetrix chips then it would be relatively easy). If not, you
need to do the mapping - what is easiest depends on what you know,
for me R is usually easier than Perl for many others it goes the
other way...but really, you need to be a bit more specific about what
you are trying to do if you want anyone to help you.
>
> A. S.
>
> ______________________________________________
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> http://www.stat.math.ethz.ch/mailman/listinfo/r-help
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| Robert Gentleman phone : (617) 632-5250 |
| Associate Professor fax: (617) 632-2444 |
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| Harvard School of Public Health email: rgentlem at jimmy.dfci.harvard.edu |
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