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You will find a wider and more experienced audience for this question on the Bioconductor mailing list. -- David On May 18, 2011, at 5:14 AM, LEMAITRE Herv? Universit? Paris Sud wrote:> Dear R-users, > > > > I'm looking for a way to query the gene ontology in R like in the GO > browser (AmiGO). I tried different packages (NCBI2R, GOsim ...) but > I did not find the way to extract genes names associated to a GO > term. Could you tell me if there is a way to do that? > >David Winsemius, MD Heritage Laboratories West Hartford, CT
LEMAITRE Herv? Universit? Paris Sud <herve.lemaitre <at> cea.fr> writes:> I'm looking for a way to query the gene ontology in R > like in the GO browser (AmiGO). I tried different > packages (NCBI2R, GOsim ...) but I did not find the way > to extract genes names associated to a GO term. Could > you tell me if there is a way to do that?You will probably have better luck posting this question on the bioconductor mailing list (read the posting guide, and search the list archives, first ...) Ben Bolker