R help - Aug 2011 - Windows 7 issues with installing packages and setting library paths

Dear all,

I am forced to work in an environment without administrator rights.

When using R2.13.1 on Windows 7 (64-Bit), I found that I can?t install or update
any packages due to missing writing permissions.

I managed to get full access to a directory on my C:\ drive now - but how do I
specify that all libraries shall be installed into this directory?

In Rcmd_environ I have the following entries:
## from R.sh
R_SHARE_DIR="C:\\Program Files\\R\\R-2.13.1\share"
R_INCLUDE_DIR="C:\\Program Files\\R\\R-2.13.1\share\include"
R_DOC_DIR="C:\\Program Files\\R\\R-2.13.1\share\doc"
R_ARCHR_LIBS_USER="C:\\Program Files\\R\\R-2.13.1\\library"
R_LIBS="C:\\Program Files\\R\\R-2.13.1\\library"


In Rprofile.site I have the following entries:

.Library.site="C:\\Program Files\\R\\R-2.13.1\\library"
.Library="C:\\Program Files\\R\\R-2.13.1\\library"
.libPaths="C:\\Program Files\\R\\R-2.13.1\\library"

What else do I need to change?

When I start up R, I get the following error message:

Error: cannot change value of locked binding for '.Library'

When calling .libPaths, I still get the wrong path:
"\\\\winfs-uni.top.gwdg.de/cscherb1$/R/R-2.13.1/library"


R has been installed at
"C:\\Program Files\\R"

but for some reason it still uses
"winfs-uni.top.gwdg.de/cscherb1$/R"

as the default directory for libraries (where I don?t have write permissions for
some unknown reasons)

What can I do to change the default library installation location?

Any help would be greatly appreciated!

Many thanks and best wishes
Christoph





-- 
Dr. rer.nat. Christoph Scherber
University of Goettingen
DNPW, Agroecology
Grisebachstr. 6
D-37077 Goettingen
Germany

phone +49 (0)551 39 8807
fax   +49 (0)551 39 8806

Homepage http://www.gwdg.de/~cscherb1

On 19.08.2011 13:32, Christoph Scherber wrote:
> Dear all,
>
> I am forced to work in an environment without administrator rights.
 >
> When using R2.13.1 on Windows 7 (64-Bit), I found that I can?t install or
update any packages due to missing writing permissions.
>
> I managed to get full access to a directory on my C:\ drive now - but how
do I specify that all libraries shall be installed into this directory?
>
> In Rcmd_environ I have the following entries:
> ## from R.sh
> R_SHARE_DIR="C:\\Program Files\\R\\R-2.13.1\share"
> R_INCLUDE_DIR="C:\\Program Files\\R\\R-2.13.1\share\include"
> R_DOC_DIR="C:\\Program Files\\R\\R-2.13.1\share\doc"
> R_ARCH> R_LIBS_USER="C:\\Program Files\\R\\R-2.13.1\\library"
> R_LIBS="C:\\Program Files\\R\\R-2.13.1\\library"
>
>
> In Rprofile.site I have the following entries:
>
> .Library.site="C:\\Program Files\\R\\R-2.13.1\\library"
> .Library="C:\\Program Files\\R\\R-2.13.1\\library"
> .libPaths="C:\\Program Files\\R\\R-2.13.1\\library"

Forget about anything your wrote above and delete what you entered.
A clean installation should provide you with a personal library for 
packages anyway. If that is not the case, you can also set an 
environment variable R_LIBS_USER whjere you can point to any directory 
(=library) where you'd like to install packages.

See ?Startup and ?.libPaths and of course the R Installation and 
Administration manual for more help.

Best,
Uwe Ligges




> What else do I need to change?
>
> When I start up R, I get the following error message:
>
> Error: cannot change value of locked binding for '.Library'
>
> When calling .libPaths, I still get the wrong path:
> "\\\\winfs-uni.top.gwdg.de/cscherb1$/R/R-2.13.1/library"
>
>
> R has been installed at
> "C:\\Program Files\\R"
>
> but for some reason it still uses
> "winfs-uni.top.gwdg.de/cscherb1$/R"
>
> as the default directory for libraries (where I don?t have write
permissions for some unknown reasons)
>
> What can I do to change the default library installation location?
>
> Any help would be greatly appreciated!
>
> Many thanks and best wishes
> Christoph
>
>
>
>
>
>
>
>
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