Dear R-help, I am having trouble with your scatterplot3d program. For help with this problem I was directed to your address by Martin Maechler at " r-core-bounces at r-project.org." I'm also sending a CC to " r-core-owner at r-project.org" as I'm not yet certain of the proper address to use for this. I have R version 2.8.1 and have downloaded 'scatterplot3d.' I can generate the points with the cube defined by the baselines. However *there are no lines connecting the points with one of the planes*; therefore the locations of the points are indeterminate; this is my problem. Could you tell me how to include the lines from the points to a plane - preferably the base plane? I am a computer-incompetent biological scientist, and would learn quicker if you gave me instructions using my data as an example. Thus I am attaching some sample data (Moraceae for MDS.txt.doc) and the instructions I am using (format.doc). I hope you can provide an example. Thank you very much. Robert P. Erickson, Duke University
See ?scatterplot3d and learn to specify the argument type="h" Uwe Ligges Eric Erickson wrote:> Dear R-help, > > I am having trouble with your scatterplot3d program. For help with this > problem I was directed to your address by Martin Maechler at " > r-core-bounces at r-project.org." I'm also sending a CC to " > r-core-owner at r-project.org" as I'm not yet certain of the proper address to > use for this. > > I have R version 2.8.1 and have downloaded 'scatterplot3d.' > > I can generate the points with the cube defined by the baselines. > > However *there are no lines connecting the points with one of the planes*; > therefore the locations of the points are indeterminate; this is my problem. > > Could you tell me how to include the lines from the points to a plane - > preferably the base plane? > > I am a computer-incompetent biological scientist, and would learn quicker if > you gave me instructions using my data as an example. Thus I am attaching > some sample data (Moraceae for MDS.txt.doc) and the instructions I am using > (format.doc). I hope you can provide an example. > > > Thank you very much. > > Robert P. Erickson, > > Duke University > > > ------------------------------------------------------------------------ > > ______________________________________________ > R-help at r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code.
Hi!! I am interested in plotting 3 different (x,y,z) coordinate sets on the same plot. How do I achieve using scatterplot3d? Is there an easy method to call to change the projection or rotate the figure along a particular axis? The following is the code that plots if one at a time. Any help is appreciated. Cheers../Murli library(lattice) library(scatterplot3d) #dna.data<-read.table("exampleStrData.txt", header=T) dna.data<-structure(list(x = c(-0.976, -6.303, -9.18, -9.06, -5.614, -0.164, 5.426, 9.291, 9.906, 7.005, 1.692, -3.463, -7.177, -7.963, -5.736, -1.219, 3.615, 6.269, 6.879, 4.084, -1.21, -7.535, -12.713, -15.096, -14.614, -11.237, -6.99, -3.484, -2.401, -4.248, -9.079, -15.575, -21.813, -25.937, -27.552, -26.456, -25.875, -25.034, -25.287, -27.215, -31.032, -36.02, -41.416, -46.256, -51.102, -54.042, -54.906, -55.819, -56.814, -58.038, -61.13, -65.598, -71.022, -76.011, -79.895, -82.225, -84.397, -86.421, -89.339, -92.108, -96.247, -100.082, -103.601, -108.129, -112.082, -114.986, -117.538, -120.449, -122.97, -126.634, -130.103, -134.035, -138.364, -142.669, -145.902, -149.369, -151.415, -153.209, -155.732, -159.215, -163.25, -167.681, -171.346, -174.791, -178.37, -181.651, -185.104, -188.12, -190.669, -194.157, -196.937, -200.38, -204.254, -208.881, -212.721, -215.459, 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z1<-dna.data$z[352:702] x1<-dna.data$x[352:702] y1<-dna.data$y[352:702] scatterplot3d(x1, y1, z1, highlight.3d=TRUE, axis=FALSE, main="DNA curvature",type="l", grid=FALSE) z2<-dna.data$z[703:1053] x2<-dna.data$x[703:1053] y2<-dna.data$y[703:1053] scatterplot3d(x2, y2, z2, highlight.3d=TRUE, axis=FALSE, main="DNA curvature",type="l", grid=FALSE) [[alternative HTML version deleted]]
Does anyone have any suggestion on this? I tried par(new="T") It does not seem to work with scatterplot3d. Any suggestion is appreciated. Cheers../Murli -----Original Message----- From: r-help-bounces at r-project.org [mailto:r-help-bounces at r-project.org] On Behalf Of Nair, Murlidharan T Sent: Wednesday, May 13, 2009 3:37 PM To: r-help at r-project.org Subject: [R] scatterplot3d Hi!! I am interested in plotting 3 different (x,y,z) coordinate sets on the same plot. How do I achieve using scatterplot3d? Is there an easy method to call to change the projection or rotate the figure along a particular axis? The following is the code that plots if one at a time. Any help is appreciated. Cheers../Murli library(lattice) library(scatterplot3d) #dna.data<-read.table("exampleStrData.txt", header=T) dna.data<-structure(list(x = c(-0.976, -6.303, -9.18, -9.06, -5.614, -0.164, 5.426, 9.291, 9.906, 7.005, 1.692, -3.463, -7.177, -7.963, -5.736, -1.219, 3.615, 6.269, 6.879, 4.084, -1.21, -7.535, -12.713, -15.096, -14.614, -11.237, -6.99, -3.484, -2.401, -4.248, -9.079, -15.575, -21.813, -25.937, -27.552, -26.456, -25.875, -25.034, -25.287, -27.215, -31.032, -36.02, -41.416, -46.256, -51.102, -54.042, -54.906, -55.819, -56.814, -58.038, -61.13, -65.598, -71.022, -76.011, -79.895, -82.225, -84.397, -86.421, -89.339, -92.108, -96.247, -100.082, -103.601, -108.129, -112.082, -114.986, -117.538, -120.449, -122.97, -126.634, -130.103, -134.035, -138.364, -142.669, -145.902, -149.369, -151.415, -153.209, -155.732, -159.215, -163.25, -167.681, -171.346, -174.791, -178.37, -181.651, -185.104, -188.12, -190.669, -194.157, -196.937, -200.38, -204.254, -208.881, -212.721, -215.459, 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-5.858, -6.642, -7.657, -8.791, -9.799, -10.886, -12.059, -13.264, -14.493, -15.695, -16.934, -18.17, -19.148, -20.035, -20.991, -21.852, -22.617, -23.134, -23.262, -23.012, -22.498, -21.825, -21.05, -20.22, -19.533, -18.896, -18.202, -17.577, -16.947, -16.464, -16.274, -16.268, -16.12, -15.836, -15.415, -14.847, -14.26, -13.643, -13.144, -12.693, -12.239, -11.799, -11.282, -10.9, -10.653, -10.292, -9.794, -9.206, -8.615, -7.987, -7.426, -6.98, -6.46, -5.955, -5.523, -4.983, -4.443, -4.085, -4.02, -4.177, -4.264, -4.279, -4.251, -4.163, -4.025, -3.782, -3.664, -3.635, -3.378, -2.939, -2.542, -2.258, -2.14, -2.168, -2.053, -1.732, -1.515, -1.39, -1.321, -1.315, -1.304, -1.555, -1.893, -2.117, -2.438, -2.826, -2.973, -2.872, -2.925)), .Names = c("x", "y", "z"), class = "data.frame", row.names = c(NA, -1053L)) z<-dna.data$z[1:351] x<-dna.data$x[1:351] y<-dna.data$y[1:351] scatterplot3d(x, y, z, highlight.3d=TRUE, axis=FALSE, main="DNA curvature",type="l", grid=FALSE) z1<-dna.data$z[352:702] x1<-dna.data$x[352:702] y1<-dna.data$y[352:702] scatterplot3d(x1, y1, z1, highlight.3d=TRUE, axis=FALSE, main="DNA curvature",type="l", grid=FALSE) z2<-dna.data$z[703:1053] x2<-dna.data$x[703:1053] y2<-dna.data$y[703:1053] scatterplot3d(x2, y2, z2, highlight.3d=TRUE, axis=FALSE, main="DNA curvature",type="l", grid=FALSE) [[alternative HTML version deleted]] ______________________________________________ R-help at r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.