Michael Friendly
2009-Feb-24 23:30 UTC
[R] polr (MASS): score test for proportional odds model
For the following model, library(vcd) arth.polr <- polr(Improved ~ Sex + Treatment + Age, data=Arthritis) summary(arth.polr) where Improved is an ordered, 3-level response I'm looking for a *simple* way to test the validity of the proportional odds assumption, typically done via a score test for equal slopes/effects over the predictors. I do find a po.test= option in the repolr package for repeated measures, but for my (tutorial) purposes this is too complex. Did I miss something simpler? -- Michael Friendly Email: friendly AT yorku DOT ca Professor, Psychology Dept. York University Voice: 416 736-5115 x66249 Fax: 416 736-5814 4700 Keele Street http://www.math.yorku.ca/SCS/friendly.html Toronto, ONT M3J 1P3 CANADA
Frank E Harrell Jr
2009-Feb-24 23:34 UTC
[R] polr (MASS): score test for proportional odds model
Michael Friendly wrote:> For the following model, > > library(vcd) > arth.polr <- polr(Improved ~ Sex + Treatment + Age, data=Arthritis) > summary(arth.polr) > > where Improved is an ordered, 3-level response I'm looking for a > *simple* way to test > the validity of the proportional odds assumption, typically done via a > score test > for equal slopes/effects over the predictors.That test is anti-conservative. I like graphical methods using partial residual plots as in my book. See the following reference. -Frank @ARTICLE{pet90par, author = {Peterson, Bercedis and Harrell, Frank E.}, year = 1990, title = {Partial proportional odds models for ordinal response variables}, journal = Applied Statistics, volume = 39, pages = {205-217} }> > I do find a po.test= option in the repolr package for repeated measures, > but for my > (tutorial) purposes this is too complex. Did I miss something simpler? >-- Frank E Harrell Jr Professor and Chair School of Medicine Department of Biostatistics Vanderbilt University