Kiran
exonmap is a bioconductor package - I'd suggest trying the bioconductor
mailing
list. Also, you're more likely to get a response if you include an
informative
subject line.
Regards
Richard.
Kiran Annaiah wrote:> Hello,
>
> A newbie to R. I am trying to use the exonmap package in R.
> According to the docs, the xmapDatabase() command should read the
> config file with all the connection parameters and connect to the DB.
> But i get the error shown below....
>
>> xmapDatabase("Human")
> Error in mysqlNewConnection(dbDriver(drv), ...) :
> RS-DBI driver: (could not connect cagadmin at mysql2.cag.chop.edu on
> dbname "NA"
> Error:Access denied for user 'cagadmin'@'cdev.cag.chop.edu'
to database
> 'NA'
> )
>
>
>
> when i connect to db using dbConnect() it works fine.
> conn<-dbConnect(drv="MySQL",username="cagadmin"
....)
>
>
> Anybody who can shed some light on whats going on here?
>
> thank you all
>
> kiran
>
>
> --------------------------------------------------------
> Kiran Annaiah
> Center for Applied Genomics Informatics
> Children's Hospital of Philadelphia
> 267-426-9355
>
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> PLEASE do read the posting guide
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> and provide commented, minimal, self-contained, reproducible code.
>
--
Richard D. Pearson richard.pearson at postgrad.manchester.ac.uk
School of Computer Science, http://www.cs.man.ac.uk/~pearsonr
University of Manchester, Tel: +44 161 275 6178
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