Jue.Wang2 at sanofi-aventis.com
2006-Sep-29 19:19 UTC
[R] Wilcoxon Rank test of Package Coin
Hi, I am running the following example which can be found on page 12 of the pdf file of COIN package wt<-wilcox_test(pd~age,data=water_transfer,distribution="exact", conf.int=TRUE) "wt" actually contains the estimate of difference in location and the confidence interval of it. I am just wondering how can I extract these values? From the examples, I understand that the Wilcoxon statistic can be extracted as statitic(wt,"linear") and the exact two-sides p-value can be extracted as pvalue(wt) But I haven't been able to find the correct function to extract the estimates of difference median of y-x) and the confidence interval of this estimates. Shall I go back to the package ExactRankTest? I do know how to extracted these values from function wilcox.exact there. Thank you Jue Wang, Biostatistician Contracted Position for Preclinical & Research Biostatistics PrO Unlimited (908) 231-3022
Jue.Wang2 at sanofi-aventis.com wrote:> Hi, > > I am running the following example which can be found on page 12 of > the pdf file of COIN package > > wt<-wilcox_test(pd~age,data=water_transfer,distribution="exact", > conf.int=TRUE) > > "wt" actually contains the estimate of difference in location and the > confidence interval of it. I am just wondering how can I extract > these values? From the examples, I understand that the Wilcoxon > statistic can be extracted as statitic(wt,"linear") and the exact > two-sides p-value can be extracted as pvalue(wt) > > But I haven't been able to find the correct function to extract the > estimates of difference median of y-x) and the confidence interval of > this estimates.Take a look at the help page for `wilcox_test', where it's clearly spelled out in the `Value:' section that "...Confidence intervals can be extracted by 'confint'." > confint(wt) 95 percent confidence interval: -0.76 0.15 sample estimates: difference in location -0.305> Shall I go back to the package ExactRankTest? I do > know how to extracted these values from function wilcox.exact there.Compared to `coin', the `exactRankTests' package is very limited in function. HTH, Henric> > Thank you > > > Jue Wang, Biostatistician Contracted Position for Preclinical & > Research Biostatistics PrO Unlimited (908) 231-3022 > > ______________________________________________ > R-help at stat.math.ethz.ch mailing list > https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the > posting guide http://www.R-project.org/posting-guide.html and provide > commented, minimal, self-contained, reproducible code. >