Xiao Shi
2005-Jul-27 07:34 UTC
[R] How learn a probabilities matrix from a large fasta file in R?
Hi everybody, I have a large fasta file(15M) which contains a lot of DNA sequence in fasta format.And i want to get probabilities matrix for 2nd order markov china from this background.Here is a web tool, http://tandem.bu.edu/markov.html.But i can not upload a large file. I wonder if there is a R packages can do this ,Thanks in advance . Jiantao Shi ** <http://tandem.bu.edu/markov.html>** <http://tandem.bu.edu/markov.html> [[alternative HTML version deleted]]