Wow! Is the response always that fast around here? Thanks to Prof. Ripley.
Creating a local copy of the R script with the correct R_HOME_DIR path set along
with changing the LD_LIBRARY_PATH environment variable to point to the library
locations that R.bin needs does the trick.
Thanks again,
Bill
> Date: Wed, 20 Feb 2002 14:51:30 +0000 (GMT)
> From: Prof Brian D Ripley <ripley at stats.ox.ac.uk>
> To: William Thompson <thompson at wadsworth.org>
> Subject: Re: [R] Changing R_HOME
> MIME-Version: 1.0
>
> On Wed, 20 Feb 2002, William Thompson wrote:
>
> > I'm trying to run multiple simulations using R on a cluster of
pentiums
running> > Solaris X86 by batching the R routines and simultaneously farming them
out
to> > the cluster nodes. This works fine on some of the machines, but on
others
the> > directory structure is mapped differently, so that when I try to run
R, it
can't> > be found, I can get around this by running /net/mp1/space/local/bin/R
which
gets> > me to R binary, but then I get the message: R_HOME
(`/usr/local/lib/R') not
> > found. I tried setting the environment variable R_HOME to the proper
library
> > location but then I get the message:
> > WARNING: ignoring environment value of R_HOME
> > R_HOME (`/usr/local/lib/R') not found
> >
> > I know the solution is to get the directory structure remapped, but
that's
not> > going to happen soon because the sysadmin is out of town and he may
have
good> > reasons for doing things the way he did. Is there some way to tell R
to look
> > somewhere other than the default location for its libraries on
startup? Any
> > clues or pointers would be appreciated.
>
> Use a customized version of the script /usr/local/lib/R/bin/R with
LD_LIBRARY_PATH> set appropriately.
>
> >
> > Thanks
> > Bill
> >
> > Bill Thompson, PhD
> > Computer Scientist
> > Wadsworth Center
> > NY State Dept of Health
> > ESP C-644
> > P.O. Box 509
> > Albany, NY 12201-0509
> > phone: (518) 486-7882
> >
> >
> >
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>
> --
> Brian D. Ripley, ripley at stats.ox.ac.uk
> Professor of Applied Statistics, http://www.stats.ox.ac.uk/~ripley/
> University of Oxford, Tel: +44 1865 272861 (self)
> 1 South Parks Road, +44 1865 272860 (secr)
> Oxford OX1 3TG, UK Fax: +44 1865 272595
>
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