R help - Sep 2011 - PerMANOVA of community data

Hi!

How can I make a PerMANOVA in R comparing treatments in a matrix that looks
something like this:

                     Treatment 1          Treatment 2           Treatment 3
Species 1          0.6
0.2                          0

Species 2           0
0.7                          0.3

Species 3           0
0.5                          0

I have 16 different species and 12 treatments

The treatments come i triplicates, so e.g. I want to compare between
treatment 1-3 with 4-6.

Please help!

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