Hi R Users, Hopefully a very simple solution, but I am stumped nevertheless. I am running glmer in which the output is too large so that not all the correlations are displayed. I expanded the max.print as recommended on this website. However, this still does not allow me to see the relevant information regarding the model fit (AIC etc), random and fixed effects. I have not been able to find any similar posts. I would be very grateful if someone could specify what I need to state in order to view all the results generated from the model. Many thanks in advance, Christine
Use 'sink' or 'capture.output' to put the output to a text file that might be easier to view. You did not indicate what OS you are using or what interface that appears to be limiting what you are seeing. On Mon, Jul 6, 2009 at 11:34 AM, Christine Griffiths<Christine.Griffiths at bristol.ac.uk> wrote:> Hi R Users, > > Hopefully a very simple solution, but I am stumped nevertheless. I am > running glmer in which the output is too large so that not all the > correlations are displayed. I expanded the max.print as recommended on this > website. However, this still does not allow me to see the relevant > information regarding the model fit (AIC etc), random and fixed effects. I > have not been able to find any similar posts. > > I would be very grateful if someone could specify what I need to state in > order to view all the results generated from the model. > > Many thanks in advance, > Christine > > ______________________________________________ > R-help at r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. >-- Jim Holtman Cincinnati, OH +1 513 646 9390 What is the problem that you are trying to solve?
On Jul 6, 2009, at 11:34 AM, Christine Griffiths wrote:> Hi R Users, > > Hopefully a very simple solution, but I am stumped nevertheless. I > am running glmer in which the output is too large so that not all > the correlations are displayed.Details? Code? Guess: I have on more than one occasion failed to assign the output of a function to an object and as a result gotten voluminous and useless output. Perhaps you need to do something like: mdl <- model.function(arguments) summary(mdl) #or str(mdl) On my machine, and any configurations with which I have experience, the default console window will accept tens of thousands of lines of output before scrolling off the "top".> I expanded the max.print as recommended on this website.??> However, this still does not allow me to see the relevant > information regarding the model fit (AIC etc), random and fixed > effects. I have not been able to find any similar posts. > > I would be very grateful if someone could specify what I need to > state in order to view all the results generated from the model.What model? And my guess is that you do not really want "all" the results of the model. If the guesses above is off target, then you should start by reading the Posting Guide and asking yourself how many of the requested items you will find in there are missing from or otherwise apply to your message. **********************> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code.********************** David Winsemius, MD Heritage Laboratories West Hartford, CT
Take a look at the print method for the mer class, class?mer. I believe setting the correlation argument to FALSE will give you what you want. See the examples. Mark Lyman, Statistician Engineering Systems & Integration, ATK> Hi R Users, > > Hopefully a very simple solution, but I am stumped nevertheless. I am > running glmer in which the output is too large so that not all the > correlations are displayed. I expanded the max.print as recommended onthis> website. However, this still does not allow me to see the relevant > information regarding the model fit (AIC etc), random and fixedeffects. I> have not been able to find any similar posts. > > I would be very grateful if someone could specify what I need to statein> order to view all the results generated from the model. > > Many thanks in advance, > Christine > > ______________________________________________ > R-help <at> r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guidehttp://www.R-project.org/posting-guide.html> and provide commented, minimal, self-contained, reproducible code. >
Hi Christine, How about try again? Cheers milton On Mon, Jul 6, 2009 at 11:34 AM, Christine Griffiths < Christine.Griffiths@bristol.ac.uk> wrote:> Hi R Users, > > Hopefully a very simple solution, but I am stumped nevertheless. I am > running glmer in which the output is too large so that not all the > correlations are displayed. I expanded the max.print as recommended on this > website. However, this still does not allow me to see the relevant > information regarding the model fit (AIC etc), random and fixed effects. I > have not been able to find any similar posts. > > I would be very grateful if someone could specify what I need to state in > order to view all the results generated from the model. > > Many thanks in advance, > Christine > > ______________________________________________ > R-help@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide > http://www.R-project.org/posting-guide.html<http://www.r-project.org/posting-guide.html> > and provide commented, minimal, self-contained, reproducible code. >[[alternative HTML version deleted]]