Mächler Marc Jacques
2010-May-20 15:39 UTC
[R] Comparing three groups, data: present, absent
Dear R-Experts, Dear friends of dung. I have a statistical Problem, to which nobody I asked could give me an answer. Maybe you can. I was in the African-Savanna and made a Dung-Monitoring. This means I walked randomly over the field and for every Dung-Event I found I noted following parameters: Species (Waterbuck, Giraffe, Reedbuck); Age-Category (less than a week, more than a week & less than a month, more than a month); Termites present (0 or 1); Now I want to compare for every species, if the percentage of Termites attack differ between the different Age-Categories and if the percentage of attacks of Species differ between the same Age-Categories. I only found a lot of very complicated models for "Presence / Absence". But I do not need to find a treshold, I just want to compare groups. My Question now: - What test do I have to use to compare groups. - Do I have to transform the data (Termite.Attack which is 0 and 1)? I really appreciate every hint. Thanks a lot, Dung-Master Marc-Jacques from the swiss federal institute of technology
## Dung observations ## Create a sample original data data <- data.frame(Species=sample(c("W", "G", "R"), 200, replace=TRUE), Age=sample(c("days", "weeks", "months"),200,replace=TRUE), Termites=sample(c(0,1),200,replace=TRUE)) ## Show what original data look like head(data) Species Age Termites 1 W months 0 2 R weeks 0 3 W weeks 0 4 G weeks 0 5 R months 1 6 W days 1 ## Analyze each species ## Here we just tabulate Waterbuck as an example data.w <- data[data$Species == "W",] table.w <- table(data.w[,2:3]) ## The results table looks like table.w Termites Age 0 1 days 18 9 months 9 11 weeks 10 18 ## Apply Chi-squared Test chisq.test(table.w) ## Usually use Pearson's Chi-squared Test ## If your data are not suitable for the Pearson's Chi-squared Test, it seems that R will tell you. ## H0 : All three age groups have same Termites attack percentage. ## H1 : All situations except H0. ----- A R learner. -- View this message in context: http://r.789695.n4.nabble.com/Comparing-three-groups-data-present-absent-tp2224751p2225612.html Sent from the R help mailing list archive at Nabble.com.
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