I apologize to the list and you if I am mis-understanding something, but...
As an example:
ind2 occurs with ind1 only in cluster#3, so why does it get a value of 4 in
your "similarity" matrix?
Also, if this isn't a recognized similarity algorithm, perhaps you should at
the very least put quotes around "similarity".
Again, sorry if I am confused here.
set wrote>
> Hello R-users,
>
> I've got a file with individuals as colums and the clusters where they
> occur in as rows. And I wanted a similarity matrix which tells me how many
> times each individual occurs with another. My eventual goal is to make
> Venn-diagrams from the occurence of my individuals.
>
> So I've this:
>
> cluster ind1 ind2 ind3 etc.
> 1 0 1 2
> 2 3 0 1
> 3 1 1 1
>
> And I want to go to this:
> ind1 ind2 ind3
> ind1 0 4 2
> ind2 4 0 4
> ind3 2 4 1
>
> is there a way to do this?
> Thank you for your help
>
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