R help - May 2011 - so current status of interactive PDF creation isl? trying to explore econometriic convergence thread

I think I just saw a thread go by on " how do I make interactive PDF from
rgl output" but I ignored it at the time and can't seem to find
consensus result
on google. Essentially I wanted to create pdf or other output to 
share a 3D plot and let viewers interact with it but it still wasn't
clear on easiest way to do this. 
Is this 2009 page the best reference?

http://cran.r-project.org/web/views/Graphics.html

Thanks.
Specific case of interest is below, 

I found rgl to be quite useful in regards to this,

http://r.789695.n4.nabble.com/maximum-likelihood-convergence-reproducing-Anderson-Blundell-1982-Econometrica-R-vs-Stata-td3502516.html#a3512807


I generated some data points using this script
( which itself uses this data file http://98.129.232.234/temp/share/em.txt )

http://98.129.232.234/temp/share/em.R.txt

After some editing with sed, the output of the above script
made this data file showing some optimization's
"trjectory" according to my variables of interest,

http://98.129.232.234/temp/share/emx.dat.txt

df<-read.table("emx.dat",header=F,sep=" ")




I subsequently found a few ways to plot the data,
notably,

png("em.png")

plot(log(df$V1),df$V2)

png.off()



http://98.129.232.234/temp/share/em.png



png("em2.png")

plot(log(df$V1),df$V2,cex=1+.2*(log(df$V3)-min(log(df$V3))))

dev.off()


http://98.129.232.234/temp/share/em2.png


But what I'd like to do is publish an interactive 3D
plot of this data similar to the rgl output
of this,

df<-read.table("emx.dat",header=F,sep=" ")
library(rgl)
rgl.points(log(df$V1),df$V2,log(df$V3))

quick google search and ?rgl didn't seem
to provide immediate answer.

Is there a way to publish interactive plots?
Thanks.

On 11-05-23 8:04 AM, Mike Marchywka wrote:
>
>
> I think I just saw a thread go by on " how do I make interactive PDF
from
> rgl output" but I ignored it at the time and can't seem to find
consensus result
> on google. Essentially I wanted to create pdf or other output to
> share a 3D plot and let viewers interact with it but it still wasn't
> clear on easiest way to do this.
> Is this 2009 page the best reference?
>
> http://cran.r-project.org/web/views/Graphics.html
>
> Thanks.
> Specific case of interest is below,
>
> I found rgl to be quite useful in regards to this,
>
>
http://r.789695.n4.nabble.com/maximum-likelihood-convergence-reproducing-Anderson-Blundell-1982-Econometrica-R-vs-Stata-td3502516.html#a3512807
>
>
> I generated some data points using this script
> ( which itself uses this data file http://98.129.232.234/temp/share/em.txt
)
>
> http://98.129.232.234/temp/share/em.R.txt
>
> After some editing with sed, the output of the above script
> made this data file showing some optimization's
> "trjectory" according to my variables of interest,
>
> http://98.129.232.234/temp/share/emx.dat.txt
>
> df<-read.table("emx.dat",header=F,sep=" ")
>
>
>
>
> I subsequently found a few ways to plot the data,
> notably,
>
> png("em.png")
>
> plot(log(df$V1),df$V2)
>
> png.off()
>
>
>
> http://98.129.232.234/temp/share/em.png
>
>
>
> png("em2.png")
>
> plot(log(df$V1),df$V2,cex=1+.2*(log(df$V3)-min(log(df$V3))))
>
> dev.off()
>
>
> http://98.129.232.234/temp/share/em2.png
>
>
> But what I'd like to do is publish an interactive 3D
> plot of this data similar to the rgl output
> of this,
>
> df<-read.table("emx.dat",header=F,sep=" ")
> library(rgl)
> rgl.points(log(df$V1),df$V2,log(df$V3))
>
> quick google search and ?rgl didn't seem
> to provide immediate answer.
>
> Is there a way to publish interactive plots?
Not in general, but for some plots there is.  See Luke Tierney's paper 
on the topic:

http://www.stat.uiowa.edu/~luke/R/misc3d/misc3d-pdf/misc3d-pdf.pdf

Presumably one of the approaches he used could be made more general, but 
it's a fair bit of work.

Duncan Murdoch

> Thanks.
>
>
>
>
>
>
>
>
>   		 	   		
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