Greg Blevins
2009-Jan-08 03:16 UTC
[R] library error on start up, error on update packages
Hello,
I am unable to update packages. I am running R version 2.8.1 (2008-12-22)
under VISTA. When I start R I get the following error:
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
Error in library(package, lib.loc = lib.loc, character.only = TRUE,
logical.return = TRUE, :
'datasets' is not a valid package -- installed < 2.0.0?
Then, at the > when I run Update packages I get this error: Error: could not
find function "update.packages"
In R 2.8.0 I do not get either of the above errors that I get in 2.8.1, but
when I update packages in 2.8.0 I get the following warnings:
package 'lattice' successfully unpacked and MD5 sums checked
Warning: cannot remove prior installation of package 'lattice'
package 'mgcv' successfully unpacked and MD5 sums checked
Warning: cannot remove prior installation of package 'mgcv'
package 'nlme' successfully unpacked and MD5 sums checked
Warning: cannot remove prior installation of package 'nlme'
package 'rpart' successfully unpacked and MD5 sums checked
Warning: cannot remove prior installation of package 'rpart'
The downloaded packages are in
C:\Users\Greg\AppData\Local\Temp\Rtmpyqi9OE\downloaded_packages
updating HTML package descriptions
Warning message:
In file.create(f.tg) :
cannot create file 'C:\PROGRA~1\R\R-28~1.0/doc/html/packages.html',
reason
'Permission denied'
Finally, as a side note, perhaps, I can install new packages using the
Install packages menu option under 2.8.1, but interestingly the newly
installed package does not appear under C:\Program
Files\R\R-2.8.1\Library--I have not found the location where the newly
installed package actually resides, but R is smart enough to locate it when
I load the package.
I am wondering if I have some VISTA setting or administrative rights issue?
Any help would be appreciated.
Greg Blevins
====================Type 'demo()' for some demos, 'help()' for
on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
Error in library(package, lib.loc = lib.loc, character.only = TRUE,
logical.return = TRUE, :
'datasets' is not a valid package -- installed < 2.0.0?
> update.packages(ask='graphics')
Error: could not find function "update.packages"
> utils:::menuInstallPkgs()
--- Please select a CRAN mirror for use in this session ---
Error in install.packages(NULL, .libPaths()[1], dependencies = NA, type type) :
no packages were specified
--
Gregory L. Blevins
Office 952 944-5743
Cell 612 251 0232
gregblev@gmail.com
[[alternative HTML version deleted]]
Prof Brian Ripley
2009-Jan-08 09:51 UTC
[R] library error on start up, error on update packages
Please do read the rw-FAQ (as requested in the posting guide): it will enlighten you. On Wed, 7 Jan 2009, Greg Blevins wrote:> Hello, > > I am unable to update packages. I am running R version 2.8.1 (2008-12-22) > under VISTA. When I start R I get the following error:I presume that is *Windows* Vista (not capitalized)?> Type 'demo()' for some demos, 'help()' for on-line help, or > 'help.start()' for an HTML browser interface to help. > Type 'q()' to quit R. > > Error in library(package, lib.loc = lib.loc, character.only = TRUE, > logical.return = TRUE, : > 'datasets' is not a valid package -- installed < 2.0.0?That seems to indicate you have a corrupt installation: we provide ways to check that too (see the rw-FAW).> Then, at the > when I run Update packages I get this error: Error: could not > find function "update.packages" > > In R 2.8.0 I do not get either of the above errors that I get in 2.8.1, but > when I update packages in 2.8.0 I get the following warnings: > > package 'lattice' successfully unpacked and MD5 sums checked > Warning: cannot remove prior installation of package 'lattice' > package 'mgcv' successfully unpacked and MD5 sums checked > Warning: cannot remove prior installation of package 'mgcv' > package 'nlme' successfully unpacked and MD5 sums checked > Warning: cannot remove prior installation of package 'nlme' > package 'rpart' successfully unpacked and MD5 sums checked > Warning: cannot remove prior installation of package 'rpart' > > The downloaded packages are in > C:\Users\Greg\AppData\Local\Temp\Rtmpyqi9OE\downloaded_packages > updating HTML package descriptions > Warning message: > In file.create(f.tg) : > cannot create file 'C:\PROGRA~1\R\R-28~1.0/doc/html/packages.html', reason > 'Permission denied' > > Finally, as a side note, perhaps, I can install new packages using the > Install packages menu option under 2.8.1, but interestingly the newly > installed package does not appear under C:\Program > Files\R\R-2.8.1\Library--I have not found the location where the newly > installed package actually resides, but R is smart enough to locate it when > I load the package. > > I am wondering if I have some VISTA setting or administrative rights issue? > Any help would be appreciated. > > Greg Blevins > > > ====================> Type 'demo()' for some demos, 'help()' for on-line help, or > 'help.start()' for an HTML browser interface to help. > > Type 'q()' to quit R. > > Error in library(package, lib.loc = lib.loc, character.only = TRUE, > logical.return = TRUE, : > 'datasets' is not a valid package -- installed < 2.0.0? > >> update.packages(ask='graphics') > Error: could not find function "update.packages" > > >> utils:::menuInstallPkgs() > --- Please select a CRAN mirror for use in this session --- > Error in install.packages(NULL, .libPaths()[1], dependencies = NA, type > type) : > no packages were specified > > -- > Gregory L. Blevins > Office 952 944-5743 > Cell 612 251 0232 > gregblev at gmail.com > > [[alternative HTML version deleted]] > > ______________________________________________ > R-help at r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. >-- Brian D. Ripley, ripley at stats.ox.ac.uk Professor of Applied Statistics, http://www.stats.ox.ac.uk/~ripley/ University of Oxford, Tel: +44 1865 272861 (self) 1 South Parks Road, +44 1865 272866 (PA) Oxford OX1 3TG, UK Fax: +44 1865 272595