Arun Kumar Saha
2008-May-19 06:32 UTC
[R] Converting variance covariance matrix to correlation matrix
Suppose I have a Variance-covariance matrix A. Is there any fast way to calculate correlation matrix from 'A' and vice-versa without emplying any 'for' loop? [[alternative HTML version deleted]]
Peter Dalgaard
2008-May-19 07:02 UTC
[R] Converting variance covariance matrix to correlation matrix
Arun Kumar Saha wrote:> Suppose I have a Variance-covariance matrix A. Is there any fast way to > calculate correlation matrix from 'A' and vice-versa without emplying any > 'for' loop? >C <- cov2cor(A) The other way around is ill-defined, but if d is the vector of variances, d <- sqrt(diag(A)) A <- outer(d, d)*C. -- O__ ---- Peter Dalgaard ?ster Farimagsgade 5, Entr.B c/ /'_ --- Dept. of Biostatistics PO Box 2099, 1014 Cph. K (*) \(*) -- University of Copenhagen Denmark Ph: (+45) 35327918 ~~~~~~~~~~ - (p.dalgaard at biostat.ku.dk) FAX: (+45) 35327907
Dimitris Rizopoulos
2008-May-19 07:07 UTC
[R] Converting variance covariance matrix to correlation matrix
check the following:
# covariance matrix
V <- var(matrix(rnorm(10*4), 10, 4))
cov2cor(V)
# correlation matrix
R <- cov2cor(V)
# vector of std. dev.
sds <- rnorm(4)^2
R * sds * rep(sds, each = nrow(R))
I hope it helps.
Best,
Dimitris
----
Dimitris Rizopoulos
Biostatistical Centre
School of Public Health
Catholic University of Leuven
Address: Kapucijnenvoer 35, Leuven, Belgium
Tel: +32/(0)16/336899
Fax: +32/(0)16/337015
Web: http://med.kuleuven.be/biostat/
http://www.student.kuleuven.be/~m0390867/dimitris.htm
----- Original Message -----
From: "Arun Kumar Saha" <arun.kumar.saha at gmail.com>
To: "r-help at stat.math.ethz.ch" <R-help at stat.math.ethz.ch>
Sent: Monday, May 19, 2008 8:32 AM
Subject: [R] Converting variance covariance matrix to correlation
matrix
> Suppose I have a Variance-covariance matrix A. Is there any fast way
> to
> calculate correlation matrix from 'A' and vice-versa without
> emplying any
> 'for' loop?
>
> [[alternative HTML version deleted]]
>
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