Here is my table> ttA B 1 297 398 2 470 376 3 30 23 4 3 3 5 0 0 b/c two cells are zero, I can't use chisq.test() in R which gives the following output;> chisq.test(tt)Pearson's Chi-squared test data: tt X-squared = NaN, df = 4, p-value = NA Warning message: Chi-squared approximation may be incorrect in: chisq.test(tt) What function should I use then? Any suggestion? [[alternative HTML version deleted]]
Francisco J. Zagmutt
2007-Aug-08 16:39 UTC
[R] test for contingency table when there are many zeros
fisher.test(tt) Francisco gallon li wrote:> Here is my table > >> tt > A B > 1 297 398 > 2 470 376 > 3 30 23 > 4 3 3 > 5 0 0 > > b/c two cells are zero, I can't use chisq.test() in R which gives the > following output; > > >> chisq.test(tt) > > Pearson's Chi-squared test > > data: tt > X-squared = NaN, df = 4, p-value = NA > > Warning message: > Chi-squared approximation may be incorrect in: chisq.test(tt) > > What function should I use then? Any suggestion? > > [[alternative HTML version deleted]] > > ______________________________________________ > R-help at stat.math.ethz.ch mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. >