R help - Mar 2006 - Multiple error bar plots

Dear R-lister

I have a question about how to create multiple error bar plots.
I found that I can use an "errbar" function from Hmisc package to
create one
error bar plot in which there are multiple data points (x, y) with the error
bars. Thus, I know that I can get "one" error bar plot which consists
of
many data points. However, I did not find a way to put "multiple"
error bar
plots into one.

In my data, x represents a group index and y represents some measurements. I
have three sets of measurements all of which have the same group indices
(thus the same x values in the errbar plot).
In other words, my data looks like this:
X1 (group index), Y11 (measurement), error of Y11 (error in measurement)
X2, Y21, error of Y21
...
Xn, Yn1, error of Yn1 // End of the first set of measurements

X1, Y12, error of Y12,
X2, Y22, error of Y22,
...
Xn, Yn2, error of Yn2 // End of the second set of measurements

X1, Y13, error of Y13,
X2, Y23, error of Y23,
...
Xn, Yn3, error of Yn3 // end of the third set of measurements

I need to put one errbar plot that include all three cases with different
symbols for each data set. How can I do this?

Thanks in advance.

Youngjin

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Hi Young-Jin,

On Fri, 2006-03-24 at 10:42 -0500, Young-Jin Lee wrote:
> Dear R-lister
> 
> I have a question about how to create multiple error bar plots.
> I found that I can use an "errbar" function from Hmisc package to
create one
> error bar plot in which there are multiple data points (x, y) with the
error
> bars. Thus, I know that I can get "one" error bar plot which
consists of
> many data points. However, I did not find a way to put "multiple"
error bar
> plots into one.
I wrote my own package to deal with exactly this scenario. You can
download it from:
http://mutualism.williams.edu/sciplot/

The relevant function is "bargraph.CI". BTW, I did this mostly to
learn
about writing packages in R, but it may be helpful to you.
> In other words, my data looks like this:
> X1 (group index), Y11 (measurement), error of Y11 (error in measurement)
> X2, Y21, error of Y21
> ...
> Xn, Yn1, error of Yn1 // End of the first set of measurements
> 
> X1, Y12, error of Y12,
> X2, Y22, error of Y22,
> ...
> Xn, Yn2, error of Yn2 // End of the second set of measurements
> 
> X1, Y13, error of Y13,
> X2, Y23, error of Y23,
> ...
> Xn, Yn3, error of Yn3 // end of the third set of measurements
BTW, you'll need to format you're data like:
X      Y_i     Measurement
1      1       1.1
1      1       1.2
...
2      1       1.2
2      1       1.5
...
3      1       1.3
3      1       1.1
...
1      2       1.1
...

In other words, you need all the measurements for each group+measurement
category rather than means and errors because the function calculates
the mean and CI for you.

HTH

Manuel