Michael Kubovy
2005-Jul-07 16:51 UTC
[R] Failing to install Hmisc on Mac OS 10.3.9, R Version 2.1.0 Patched (2005-05-12)
Kindly cc me when replying to the list. trying URL 'http://www.biometrics.mtu.edu/CRAN/src/contrib/Hmisc_3.0-6.tar.gz' Content type 'application/x-gzip' length 462535 bytes opened URL =================================================downloaded 451Kb * Installing *source* package 'Hmisc' ... ** libs g77 -fno-common -g -O2 -c cidxcn.f -o cidxcn.o g77 -fno-common -g -O2 -c cidxcp.f -o cidxcp.o g77 -fno-common -g -O2 -c hoeffd.f -o hoeffd.o g77 -fno-common -g -O2 -c jacklins.f -o jacklins.o g77 -fno-common -g -O2 -c largrec.f -o largrec.o gcc-3.3 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include -I/usr/local/include -fno-common -g -O2 -c ranksort.c -o ranksort.o g77 -fno-common -g -O2 -c rcorr.f -o rcorr.o g77 -fno-common -g -O2 -c wclosest.f -o wclosest.o gcc-3.3 -bundle -flat_namespace -undefined suppress -L/usr/local/lib -o Hmisc.so cidxcn.o cidxcp.o hoeffd.o jacklins.o largrec.o ranksort.o rcorr.o wclosest.o -L/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2 -lg2c -lSystem -lcc_dynamic -framework R ** R ** preparing package for lazy loading Error in dyn.load(x, as.logical(local), as.logical(now)) : unable to load shared library '/Library/Frameworks/R.framework/Resources/library/grDevices/libs/ grDevices.so': dlcompat: dyld: /Library/Frameworks/R.framework/Resources/bin/exec/R version mismatch for library: /usr/local/lib/libxml2.2.dylib (compatibility version of user: 9.0.0 greater than library's version: 8.0.0) Loading required package: grDevices Error in dyn.load(x, as.logical(local), as.logical(now)) : unable to load shared library '/Library/Frameworks/R.framework/Resources/library/grDevices/libs/ grDevices.so': dlcompat: dyld: /Library/Frameworks/R.framework/Resources/bin/exec/R version mismatch for library: /usr/local/lib/libxml2.2.dylib (compatibility version of user: 9.0.0 greater than library's version: 8.0.0) In addition: Warning message: package grDevices in options("defaultPackages") was not found ** Removing '/Library/Frameworks/R.framework/Versions/2.1.0/Resources/library/ Hmisc' ** Restoring previous '/Library/Frameworks/R.framework/Versions/2.1.0/Resources/library/ Hmisc' Error: package 'grDevices' could not be loaded Execution halted ERROR: lazy loading failed for package 'Hmisc' When I try install.packages("grDevices") Warning message: no package 'grDevices' at the repositories in: download.packages(pkgs, destdir = tmpd, available = available, _____________________________ Professor Michael Kubovy University of Virginia Department of Psychology USPS: P.O.Box 400400 Charlottesville, VA 22904-4400 Parcels: Room 102 Gilmer Hall McCormick Road Charlottesville, VA 22903 Office: B011 +1-434-982-4729 Lab: B019 +1-434-982-4751 Fax: +1-434-982-4766 WWW: http://www.people.virginia.edu/~mk9y/