Hi, everyone,
I ran the test case in "Introduction to the Bioconductor
marrayInput package first. When I ran the session in (read.marrayRaw) I got the
following error messages. Other sessions work well.
The functions and errors are labled with blue and red respectively.
>mraw <- read.Spot(path = datadir, layout = galinfo$layout, gnames =
galinfo$gnames, target = swirlTargets)
Error in file(con, "r") : unable to open connection
In addition: Warning message:
cannot open file `C:/PROGRA~1/R/rw1091/library/marray/swirldata/81'
> fnames <- as.vector(swirlTargets@maInfo[,1])
> swirl.raw <- read.marrayRaw(fnames, path = datadir,
+ name.Gf = "Gmean", name.Gb = "morphG",
+ name.Rf = "Rmean", name.Rb = "morphR",
+ layout = swirl.layout,
+ gnames = swirl.gnames,
+ targets = swirlTargets)
Error in file(con, "r") : unable to open connection
In addition: Warning message:
cannot open file `C:/PROGRA~1/R/rw1091/library/marray/swirldata/81'
> array1.raw <- read.Spot(fnames, path=datadir)
Error in file(con, "r") : unable to open connection
In addition: Warning messawell
cannot open file `C:/PROGRA~1/R/rw1091/library/marray/swirldata/81'
I copy and paste the whole set of examples.
Is it possible something is not right with the spot files?
I really need your help to solve this problem.
Thank you very much!!
Best regards
Zang Shizhu
---------------------------------
×¢²áÊÀ½çÒ»Á÷Æ·ÖʵÄÑÅ»¢Ãâ·ÑµçÓÊ
[[alternative HTML version deleted]]
