jobst landgrebe
2003-Aug-06 06:28 UTC
[R] R CMD check: checking for undocumented objects ... WARNING
Dear List, I have a problem building an R package using R 1.7.1 that I cannot resolve myself. R CMD check tells me that functions I documented properly in Rd-files are not documented and gives a TeX error at the end, altough the Rd files check is OK. I have three fucntions, one gets through without complaining, the other two don't. All the docu for the example data is also OK. I went through the Rd files over and over, but could not find any problem. Can anyone help me? Thank in advance, Jobst with R CMD check daMA (that's my package), I get: * checking for working latex ... OK * using log directory '/home/jlandgr1/stat_stuff/Rpackages/daMA/daMA.Rcheck' * checking for file 'daMA/DESCRIPTION' ... OK * checking if this is a source package ... OK * Installing *source* package 'daMA' ... ** R ** data ** help >>> Building/Updating help pages for package 'daMA' Formats: text html latex example analyseMA text html latex example cinfo text html latex example cinfoB.AB text html latex example cmat text html latex example cmatB.AB text html latex example core text html latex example data.3x2 text html latex example designMA text html latex example designs.basic text html latex example designs.composite text html latex example id.3x2 text html latex example * DONE (daMA) * DONE (INSTALL) * checking package directory ... OK * checking for sufficient/correct file permissions ... OK * checking DESCRIPTION meta-information ... OK * checking package dependencies ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for syntax errors ... OK * checking R files for library.dynam ... OK * checking generic/method consistency ... OK * checking for assignment functions with final arg not named 'value' ... OK * checking Rd files ... OK * checking for undocumented objects ... WARNING Undocumented code objects: [1] "analyseMA" "designMA" * checking for code/documentation mismatches ... OK * checking for undocumented arguments in \usage ... OK * creating daMA-Ex.R ... OK * checking examples ... OK * creating daMA-manual.tex ... OK * checking daMA-manual.tex ... ERROR Could not create DVI version. This typically indicates Rd problems. Dr. Jobst Landgrebe Universitaet Goettingen Zentrum Biochemie Humboldtallee 23 37073 Goettingen Germany tel: 0551/39-2316 oder -2223 fax: 0551/39-5960 web: http://www.microarrays.med.uni-goettingen.de mail: jlandgr1 at gwdg.de