>>>>> "ChrisL" == Christoph Lehmann <lehmann at
puk.unibe.ch>
>>>>> on Wed, 26 Feb 2003 15:37:58 +0100 writes:
ChrisL> am I right in the assumption, that for calculation
ChrisL> of the condition numbers I have to use the
ChrisL> correlation matrix of X, and not t(x) %*% x?
not quite.
R has a kappa() with several variants/methods for computing
condition numbers, as help.search() shows quickly.
If I do
> help.search("condition number")
Help files with alias or title matching 'condition number',
type 'help(FOO, package = PKG)' to inspect entry 'FOO(PKG)
TITLE':
rcond(Matrix) Estimate the Reciprocal Condition Number
kappa(base) Estimate the Condition Number
I see that the CRAN package Matrix has even more
>> e <- eigen(t(x) %*% x)
using the SVD directly is better...
ChrisL> better (x must not have a first column of ones):
>> e <- eigen(cor(x))
>> e$val
ChrisL> [1] 6.6653e+07 2.0907e+05 1.0536e+05 1.8040e+04 2.4557e+01
2.0151e+00
>> sqrt(e$val[1]/e$val)
ChrisL> [1] 1.000 17.855 25.153 60.785 1647.478 5751.216
ChrisL> thanks
ChrisL> christoph
ChrisL> --
ChrisL> Christoph Lehmann Phone: ++41 31 930
93 83
ChrisL> Department of Psychiatric Neurophysiology Mobile: ++41 76 570
28 00
ChrisL> University Hospital of Clinical Psychiatry Fax: ++41 31 930
99 61
ChrisL> Waldau lehmann at
puk.unibe.ch
ChrisL> CH-3000 Bern 60
http://www.puk.unibe.ch/cl/pn_ni_cv_cl.html
ChrisL> ______________________________________________
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