James Anderson
2006-Jun-09 20:20 UTC
[R] question about using ancova in R to do variable selection
Hi, I have a microarray data which has about 10000 genes and 15 measurements. The 15 measurements contain 6 control, 3 low dose, 3 medium dose, 3 high dose. If I treat the dose level as a continuous variable, how can I use ANCOVA to do gene selection? (I mean to select those genes that response to different level of doses differently?). Thank you very much! James __________________________________________________ [[alternative HTML version deleted]]
Spencer Graves
2006-Jun-11 01:02 UTC
[R] question about using ancova in R to do variable selection
Have you tried Bioconductor (www.bioconductor.org)? I haven't seen any replies to your question, and I know next to nothing about microarray data. I understand that Bioconductor specializes in microarray and related data, has a listserve, etc. hope this helps, Spencer Graves James Anderson wrote:> Hi, > I have a microarray data which has about 10000 genes and 15 measurements. The 15 measurements contain 6 control, 3 low dose, 3 medium dose, 3 high dose. If I treat the dose level as a continuous variable, how can I use ANCOVA to do gene selection? (I mean to select those genes that response to different level of doses differently?). Thank you very much! > > James > > __________________________________________________ > > > > [[alternative HTML version deleted]] > > ______________________________________________ > R-help at stat.math.ethz.ch mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html