When plotting a heatmap with heatmap.2 the shortest euclidean distance cluster is plotted in the top left corner of the heatmap <http://r.789695.n4.nabble.com/file/n4651430/heatmap.2.jpeg> when plotting the same data with pheatmap the very same cluster is in the bottom right corner <http://r.789695.n4.nabble.com/file/n4651430/pheatmap.jpeg> I am just wondering what I would need to change in my pheatmap code to have the same orientation as with heamap.2 (eg the ? Any comments much appreciated. Thanks, DKV -- View this message in context: http://r.789695.n4.nabble.com/flip-heatmap-pheatmap-tp4651430.html Sent from the R help mailing list archive at Nabble.com.