Martin Batholdy
2012-Feb-14 11:42 UTC
[R] cross validation in rvm not working? (kernlab package)
Hi, according to ?rvm the relevance vector machine function as implemented in the kernlab-package has an argument 'cross' with which you can perform k-fold cross validation. However, when I try to add a 10-fold cross validation I get the following error message: Error in match.arg(type, c("C-svc", "nu-svc", "kbb-svc", "spoc-svc", "C-bsvc", : 'arg' should be one of ?C-svc?, ?nu-svc?, ?kbb-svc?, ?spoc-svc?, ?C-bsvc?, ?one-svc?, ?eps-svr?, ?eps-bsvr?, ?nu-svr? code-example: # create data x <- seq(-20,20,0.1) y <- sin(x)/x + rnorm(401,sd=0.05) # train relevance vector machine foo <- rvm(x, y, cross=10) So, does that mean that cross-validation is not working for rvm at the moment? (since the type argument only allows support vector regression or classification)
Uwe Ligges
2012-Feb-14 16:51 UTC
[R] cross validation in rvm not working? (kernlab package)
Please report bugs in packages to the corresponding package maintainer (perhaps suggesting a fix if you have an idea how to do that). Uwe Ligges On 14.02.2012 12:42, Martin Batholdy wrote:> Hi, > > according to ?rvm the relevance vector machine function as implemented in the kernlab-package > has an argument 'cross' with which you can perform k-fold cross validation. > > However, when I try to add a 10-fold cross validation I get the following error message: > > Error in match.arg(type, c("C-svc", "nu-svc", "kbb-svc", "spoc-svc", "C-bsvc", : > 'arg' should be one of ?C-svc?, ?nu-svc?, ?kbb-svc?, ?spoc-svc?, ?C-bsvc?, ?one-svc?, ?eps-svr?, ?eps-bsvr?, ?nu-svr? > > > code-example: > > # create data > x<- seq(-20,20,0.1) > y<- sin(x)/x + rnorm(401,sd=0.05) > > # train relevance vector machine > foo<- rvm(x, y, cross=10) > > > So, does that mean that cross-validation is not working for rvm at the moment? > (since the type argument only allows support vector regression or classification) > > ______________________________________________ > R-help at r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code.