Sascha Vieweg
2011-Apr-20 20:06 UTC
[R] Include C++ DLL, error in ...: C symbol name not in load table
Hello R experts
I am googling and reading around, however, I can't get it working
(perhaps because I do not understand much C, however, I'll give it
a try). I am trying to include C++ code into an R routine, where
the C++ code looks:
#include <iostream>
using namespace std;
void foo (double* x, double* y, double* out)
{
out[0] = x[0] + y[0];
}
Back in R, the command
R CMD SHLIB --preclean -o xplusy
works fine resulting in two new files, xplusy.o and xplusy.so. The
wrapper in R is:
dyn.load("xplusy.so")
xplusy <- function(x, y){
.C("foo", as.double(x), as.double(y), out=double(1))$out
}
xplusy(1, 2)
dyn.unload("xplusy.so")
Now, dyn.load() works and xplusy also shows up in getLoadedDLLs().
However, when invoking the function, xplusy(1, 2), R complains:
Error in .C("foo", as.double(x), as.double(y), out = double(1)): C
symbol name "foo" not in load table
I found some hints concerning Fortran code producing this error
message, but no help concerning C code.
Any help tips?
Thanks, *S*
$. uname -a
Darwin * 10.7.3 Darwin Kernel Version 10.7.3[...]
$: c++ --version
i686-apple-darwin10-g++-4.2.1 (GCC) 4.2.1 (Apple Inc. build 5666)
(dot 3)
platform i386-apple-darwin9.8.0
arch i386
os darwin9.8.0
system i386, darwin9.8.0
status
major 2
minor 12.2
year 2011
month 02
day 25
svn rev 54585
language R
version.string R version 2.12.2 (2011-02-25)
--
Sascha Vieweg, saschaview at gmail.com
Duncan Murdoch
2011-Apr-20 20:24 UTC
[R] Include C++ DLL, error in ...: C symbol name not in load table
On 20/04/2011 4:06 PM, Sascha Vieweg wrote:> Hello R experts > > I am googling and reading around, however, I can't get it working > (perhaps because I do not understand much C, however, I'll give it > a try). I am trying to include C++ code into an R routine, where > the C++ code looks: > > #include<iostream> > using namespace std; > void foo (double* x, double* y, double* out) > { > out[0] = x[0] + y[0]; > } > > Back in R, the command > > R CMD SHLIB --preclean -o xplusy > > works fine resulting in two new files, xplusy.o and xplusy.so. The > wrapper in R is: > > dyn.load("xplusy.so") > xplusy<- function(x, y){ > .C("foo", as.double(x), as.double(y), out=double(1))$out > } > xplusy(1, 2) > dyn.unload("xplusy.so") > > Now, dyn.load() works and xplusy also shows up in getLoadedDLLs(). > However, when invoking the function, xplusy(1, 2), R complains: > > Error in .C("foo", as.double(x), as.double(y), out = double(1)): C > symbol name "foo" not in load table > > I found some hints concerning Fortran code producing this error > message, but no help concerning C code.You have C++ code, not C code. C++ normally mangles names of exports. To get this to work, you should surround your declarations with extern "C" { } Another possibility is to use the Rcpp package; it writes the interface code for you. Duncan Murdoch> > Any help tips? > > Thanks, *S* > > $. uname -a > Darwin * 10.7.3 Darwin Kernel Version 10.7.3[...] > > $: c++ --version > i686-apple-darwin10-g++-4.2.1 (GCC) 4.2.1 (Apple Inc. build 5666) > (dot 3) > > platform i386-apple-darwin9.8.0 > arch i386 > os darwin9.8.0 > system i386, darwin9.8.0 > status > major 2 > minor 12.2 > year 2011 > month 02 > day 25 > svn rev 54585 > language R > version.string R version 2.12.2 (2011-02-25) >
Massimiliano
2011-Apr-21 19:05 UTC
[R] Include C++ DLL, error in ...: C symbol name not in load table
Maybe you have to add #include <stdio.h> #include <R.h> to your C++ source code. Massimiliano Tripoli Il giorno mer, 20/04/2011 alle 22.06 +0200, Sascha Vieweg ha scritto:> #include <iostream> > using namespace std; > void foo (double* x, double* y, double* out) > { > out[0] = x[0] + y[0]; > } > >