myrmail at earthlink.net
2010-Feb-20 03:21 UTC
[R] Problem with installing "genetics" package
I have tried to install the "genetics" package and am getting and error. The log is below. For information, I am using R 2.10.1 on the Windows XP operating system. The mirror site I'm using is Michigan Technological University. Your help in this matter will be greatly appreciated. Murray M Cooper, PhD Richland Statistics 9800 North 24th St Richland, MI, USA 49083 ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ Log from attempted install:> utils:::menuInstallPkgs()also installing the dependencies ?combinat?, ?gdata?, ?gtools?, ?mvtnorm? trying URL 'http://cran.mtu.edu/bin/windows/contrib/2.10/combinat_0.0-7.zip' Content type 'application/zip' length 25623 bytes (25 Kb) opened URL downloaded 25 Kb trying URL 'http://cran.mtu.edu/bin/windows/contrib/2.10/gdata_2.7.1.zip' Content type 'application/zip' length 817994 bytes (798 Kb) opened URL downloaded 798 Kb trying URL 'http://cran.mtu.edu/bin/windows/contrib/2.10/gtools_2.6.1.zip' Content type 'application/zip' length 91801 bytes (89 Kb) opened URL downloaded 89 Kb trying URL 'http://cran.mtu.edu/bin/windows/contrib/2.10/mvtnorm_0.9-9.zip' Content type 'application/zip' length 202656 bytes (197 Kb) opened URL downloaded 197 Kb trying URL 'http://cran.mtu.edu/bin/windows/contrib/2.10/genetics_1.3.4.zip' Content type 'application/zip' length 303230 bytes (296 Kb) opened URL downloaded 296 Kb package 'combinat' successfully unpacked and MD5 sums checked package 'gdata' successfully unpacked and MD5 sums checked Error in normalizePath(path) : path[1]="C:\Program Files\R\R-2.10.1\library/gdata": The system cannot find the file specified>
I just installed it, and it worked fine.> sessionInfo()R version 2.10.1 (2009-12-14) i386-pc-mingw32 locale: [1] LC_COLLATE=English_United States.1252 LC_CTYPE=English_United States.1252 [3] LC_MONETARY=English_United States.1252 LC_NUMERIC=C [5] LC_TIME=English_United States.1252 attached base packages: [1] stats graphics grDevices utils datasets methods base other attached packages: [1] genetics_1.3.4 mvtnorm_0.9-9 MASS_7.3-4 gtools_2.6.1 gdata_2.7.1 combinat_0.0-7 loaded via a namespace (and not attached): [1] tools_2.10.1 On Fri, Feb 19, 2010 at 10:21 PM, <myrmail at earthlink.net> wrote:> > I have tried to install the "genetics" package and am getting and error. > The log is below. For information, I am using R 2.10.1 on the Windows > XP operating system. The mirror site I'm using is Michigan Technological > University. > > Your help in this matter will be greatly appreciated. > > Murray M Cooper, PhD > Richland Statistics > 9800 North 24th St > Richland, MI, USA 49083 > > ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ > Log from attempted install: > >> utils:::menuInstallPkgs() > also installing the dependencies ?combinat?, ?gdata?, ?gtools?, ?mvtnorm? > > trying URL 'http://cran.mtu.edu/bin/windows/contrib/2.10/combinat_0.0-7.zip' > Content type 'application/zip' length 25623 bytes (25 Kb) > opened URL > downloaded 25 Kb > > trying URL 'http://cran.mtu.edu/bin/windows/contrib/2.10/gdata_2.7.1.zip' > Content type 'application/zip' length 817994 bytes (798 Kb) > opened URL > downloaded 798 Kb > > trying URL 'http://cran.mtu.edu/bin/windows/contrib/2.10/gtools_2.6.1.zip' > Content type 'application/zip' length 91801 bytes (89 Kb) > opened URL > downloaded 89 Kb > > trying URL 'http://cran.mtu.edu/bin/windows/contrib/2.10/mvtnorm_0.9-9.zip' > Content type 'application/zip' length 202656 bytes (197 Kb) > opened URL > downloaded 197 Kb > > trying URL 'http://cran.mtu.edu/bin/windows/contrib/2.10/genetics_1.3.4.zip' > Content type 'application/zip' length 303230 bytes (296 Kb) > opened URL > downloaded 296 Kb > > package 'combinat' successfully unpacked and MD5 sums checked > package 'gdata' successfully unpacked and MD5 sums checked > Error in normalizePath(path) : > ?path[1]="C:\Program Files\R\R-2.10.1\library/gdata": The system cannot find the file specified >> > > ______________________________________________ > R-help at r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. >