similar to: Which features would you like to see on the crantastic.org community portal?

CRAN (and crantastic) updates this week New packages ------------ * DCGL (1.0) Bao-Hong Liu http://crantastic.org/packages/DCGL Functions for basic differential coexpression analyses: gene filtering, link filtering, DCG (Differentially-Coexpressed Gene) identification and DCL (Differentially-Coexpressed Links) identification.Two algorithms,named DCP and DCe, are provided for

Hi all, Here's my idea for the google summer of code - it's a resubmission from last year. We had a couple of interested students, but their proposals weren't quite competitive enough to get funding. Regards, Hadley Summary: Create an information portal for the fast growing list of R packages, integrating package documentation and journal publications with feedback from the useR

CRAN (and crantastic) updates this week New packages ------------ * EffectStars (1.0) Maintainer: Unknown Author(s): Gunther Schauberger License: GPL-2 http://crantastic.org/packages/EffectStars The package provides functions to visualize regression models with categorical response. The effects of the covariates are plotted with star plots in order to allow for an optical

CRAN (and crantastic) updates this week New packages ------------ * bdoc (1.0) Michael Anderson http://crantastic.org/packages/bdoc This package contains a function that will classify DNA barcodes as well as a few test and reference data sets. * bdsmatrix (1.0) Terry Therneau http://crantastic.org/packages/bdsmatrix This is a special case of sparse matrices, used by coxme and

CRAN (and crantastic) updates this week New packages ------------ * bisectr (0.0.2) Maintainer: Winston Chang Author(s): Winston Chang <winston at stdout.org> License: GPL-2 http://crantastic.org/packages/bisectr Tools to find bad commits with git bisect * CUMP (1.0) Maintainer: Xuan Liu Author(s): Xuan Liu <liuxuan at bu.edu> and Qiong Yang <qyang at bu.edu>

CRAN (and crantastic) updates this week New packages ------------ * apcluster (1.0.1) Ulrich Bodenhofer http://crantastic.org/packages/apcluster The apcluster package implements Frey's and Dueck's Affinity Propagation clustering in R. The algorithms are analogous to the Matlab code published by Frey and Dueck. * BioPhysConnectoR (1.6-1) Franziska Hoffgaard

CRAN (and crantastic) updates this week New packages ------------ * allan (1.0) Alan Lee http://crantastic.org/packages/allan Automates Large Linear Analysis Model Fitting * andrews (1.0) Jaroslav Myslivec http://crantastic.org/packages/andrews Andrews curves for visualization of multidimensional data * anesrake (0.3) Josh Pasek http://crantastic.org/packages/anesrake This

CRAN (and crantastic) updates this week New packages ------------ * Bergm (1.0) Alberto Caimo http://crantastic.org/packages/Bergm Functions implementing Bayesian estimation for exponential random graph models via exchange algorithm Updated packages ---------------- lmtest (0.9-26), logcondens (1.3.5), MTSKNN (0.0-4), pmml (1.2.21), r2lUniv (0.9.4), rattle (2.5.11), rgdal (0.6-23),

CRAN (and crantastic) updates this week New packages ------------ * disclapmix (0.1) Maintainer: Mikkel Meyer Andersen Author(s): Mikkel Meyer Andersen and Poul Svante Eriksen License: GPL-2 http://crantastic.org/packages/disclapmix disclapmix makes inference in a mixture of Discrete Laplace distributions using the EM algorithm. * EstSimPDMP (1.1) Maintainer: Unknown Author(s):

CRAN (and crantastic) updates this week New packages ------------ Updated packages ---------------- New reviews ----------- This email provided as a service for the R community by http://crantastic.org. Like it? Hate it? Please let us know: cranatic at gmail.com.

Under the "further resources" section I'd like to suggest the following addition : * http://crantastic.org/ lists popular packages according to other users votes. Consider briefly reviewing the top 30 packages before posting to r-help since someone may have already released a package that solves your problem. Thats just a straw man idea so I hope there will be answer, or

Overview ======== This module implements the Center for Internet Security (CIS) Security Configuration Benchmark for Red Hat Enterprise Linux 6 v.1.1.0 (avilable at http://benchmarks.cisecurity.org). Each scored control has been implemented as a class or a custom fact. Installation ============ Please either: - Clone git repo from https://github.com/arildjensen/cis-puppet - Run "puppet

Dear R users, I am trying to fit a GLMM using lmer to a dataset where the brood identity (LNRREIR) is nested within mothers identity. The reason for this is that each mother can have several nests within each year and also between years. I am running the following script (actually I have tried all different combinations with LNRREIR and mother): mod <- lmer(sr~z.hatchday +

Does anyone have some nice ways of showing what's on CRAN? A time-series of the number of packages? A clustered graph of packages by keyword? I'm just after a more impressive way of saying "there's 2600 packages on CRAN" than saying that. Counts of lines of R and C/Fortran code would be interesting... The CRANtastic tag cloud is quite handy... Anything else? Barry

Hello all, I am looking for the function benchmark2 ( a nice function for comparing the performance of two or more functions). I found online it exists in the butler package http://crantastic.org/packages/butler But for some reason, that package was removed from CRAN: http://cran.r-project.org/web/packages/butler/ It can still be downloaded from the archive, but I am wondering if it had moved

Are there implementations of, e.g. Neville's algorithm, for interpolating polynomials through some data points? Nevilles' is an improvement on Lagrange interpolation. And how about interpolating rational functions? I could not find anything at rseek.org or at crantastic.org. thanks -- View this message in context:

Webgen uses file paths to generate multilevel menues, bread crumbs etc. And limits the character range in paths to a-zA-Z. As the directory names are used verbatim as menu labels this is fairly limitting for non-english pages. Is there a way to map directory names to configurable UTF8 strings for menu labels? oao

Hi everybody, just another Google Summer of Code project idea. Best, Manuel. ---------------------------------------------------------------------- cranlab -- "You can't control what you can't measure" [0] Mentor: Manuel J. A. Eugster Summary: The aim of this project is the (1) implementation of software metrics to analyze R packages and (2) the creation of a CRAN

Hello folks, I've been on a journey trying to figure out how to manage documents that are amenable to sharing and editing, but that contain dynamic content generated by R. I've come to the following solution: I use Sweave to generate labeled png & pdf figures, and I "Insert & Link" those figures as "Pictures" in a Word 2010 doc. Thus, when data or code

Hi all, I need to do massive simulations in the next two years. I estimated that I will need about 64GB memory, if I do not want to split up the calculations. Additionally I would like to have it as fast as possible. Can R handle multi-core processors and can all standard operating systems handle the same amount of memory and speed? Perhaps someone could point me to a webshop that sales