search for: uriart

...e color of the plot region (i.e., the area bounded by the axes) to be different from the margin area (i.e., the area of the figure not within the axes region). I can use "bg" but that changes the background of everything? How can I accomplish what I want? Thanks, Ramon -- Ramón Díaz-Uriarte Triana 47 28016 Madrid Spain email:ramon-diaz at teleline.es Phone: +-34-917-730-620 +-34-657-186-407 -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list -- Read http://www.ci.tuwien.ac.at/~hornik/R/R-FAQ.html Send "info", &...

...pression. > > Otherwise, R does have internal facilities to do internal (gzip) > compression and decompression (e.g. see the end of > src/main/connections.c), and you could make creative use of serialization > to do the compression. > > > On Thu, 28 Feb 2008, Ramon Diaz-Uriarte wrote: > > > Dear All, > > > > I'd like to be able to have R store (in a list component) a compressed > > data set, and then write it out uncompressed. gzcon and gzfile work in > > exactly the opposite direction. What would be a good way to handle > &g...

...s one way to do it is to have C deal with the compression and uncompression (e.g., using zlib or the bzip2 libraries) and then use readBin, etc, from R. But, if I can, I'd like to avoid our C code having to call zlib, etc, so as to make our package easily portable. Thanks, R. -- Ramon Diaz-Uriarte Statistical Computing Team Structural Biology and Biocomputing Programme Spanish National Cancer Centre (CNIO) http://ligarto.org/rdiaz

...f.", fpost, sep = "")) calledf(x) ## do more stuff } Two questions: 1) Why is the second better? 2) By changing g or h I could use "do.call" instead; why would that be better? Because I can handle differences in argument lists? Thanks, R. -- Ram?n D?az-Uriarte Centro Nacional de Investigaciones Oncol?gicas (CNIO) (Spanish National Cancer Center) Melchor Fern?ndez Almagro, 3 28029 Madrid (Spain) Fax: +-34-91-224-6972 Phone: +-34-91-224-6900 http://ligarto.org/rdiaz PGP KeyID: 0xE89B3462 (http://ligarto.org/rdiaz/0xE89B3462.asc) **NOTA DE CONFIDENCIAL...

...t - collection of urwid widgets ramon at Bufo:~$ shows two possibly relevant packages. (Maybe this is a Ubuntu/Debian difference? I think Dirk has some machines running Ubuntu). Best, R. > > Both packages list URW fonts promimently in their Description: > > Dirk -- Ramon Diaz-Uriarte Department of Biochemistry, Lab B-25 Facultad de Medicina Universidad Aut?noma de Madrid Arzobispo Morcillo, 4 28029 Madrid Spain Phone: +34-91-497-2412 Email: rdiaz02 at gmail.com ramon.diaz at iib.uam.es http://ligarto.org/rdiaz

...277 to 279) --with-system-bzlib \ --with-system-pcre \ --with-system-zlib \ I wonder if these are still necessary and, in fact, when building R alpha (specifically, R-alpha_2016-03-21_r70361.tar.gz) I get a warning saying that those options are not recognized. Best, R. -- Ramon Diaz-Uriarte Department of Biochemistry, Lab B-25 Facultad de Medicina Universidad Aut?noma de Madrid Arzobispo Morcillo, 4 28029 Madrid Spain Phone: +34-91-497-2412 Email: rdiaz02 at gmail.com ramon.diaz at iib.uam.es http://ligarto.org/rdiaz

On 30 December 2023 at 23:49, Ramon Diaz-Uriarte wrote: | All is good. (Just for the sake of curiosity, and if you have the time: why did you find those incantations suspicious?) Memory is fuzzy and no ECC in my wetware :) but as I seem to recall it had to do with my fears over filenames not being standardized enough / this interfering with th...

I noticed this error in my demo from previous versions as well as R 0.99.0. Is there a way around this one also? Thanks in advance... > demo(dyn.load) demo(dyn.load) ---- ~~~~~~~~ Type <Return> to start : > dyn.load(file.path(R.home(), "demos", "dynload", paste("zero", .Platform$dynlib.ext, sep = ""))) Error in

Dear Colleagues, We are using the phylog.gls.fit() function from the R package "PHYLOGR" (Diaz-Uriarte R, Garland T: PHYLOGR: Functions for phylogenetically based statistical analyses. 2007. Available at [http://cran.r-project.org/web/packages/PHYLOGR/index.html]) to correct for lack of independence between data points. (In our particular case, the lack of independence is due to common ancestry, he...

...ng that and saves me from reinventing the wheel of using sockets, etc, directly from R. However, Simon's comment about better ways of R-to-R communication made me wonder if this idea really makes sense. What is the catch? Have other people tried similar approaches? Thanks, R. -- Ramon Diaz-Uriarte Statistical Computing Team Structural Biology and Biocomputing Programme Spanish National Cancer Centre (CNIO) http://ligarto.org/rdiaz

...d edition of Agresti's "Categorical Data Analysis" (my old copy of the first ed. of that wonderful book is falling apart). I would appreciate suggestions about other comparable books which, if possible, have examples using R/S code (instead of SAS). Thanks, Ram?n -- Ram?n D?az-Uriarte Bioinformatics Unit Centro Nacional de Investigaciones Oncol?gicas (CNIO) (Spanish National Cancer Center) Melchor Fern?ndez Almagro, 3 28029 Madrid (Spain) http://bioinfo.cnio.es/~rdiaz

...f classification error becames larger than that of the previous model (or of the initial model). So nothing really new. But I haven't been able to find any comments in the literature about "simplification" of random forests. Any suggestions/comments? Best, Ram?n -- Ram?n D?az-Uriarte Bioinformatics Unit Centro Nacional de Investigaciones Oncol?gicas (CNIO) (Spanish National Cancer Center) Melchor Fern?ndez Almagro, 3 28029 Madrid (Spain) Fax: +-34-91-224-6972 Phone: +-34-91-224-6900 http://bioinfo.cnio.es/~rdiaz

...r.org/biocLite.R") biocLite(some_packages) I've ended up doing .libPaths(c(the_user_home, .libPaths())) but this does not look very friendly for new users. Best, R. > > Dirk > > | > | > | -Kirill > | > | > Dirk > | > > | -- Ramon Diaz-Uriarte Department of Biochemistry, Lab B-25 Facultad de Medicina Universidad Aut?noma de Madrid Arzobispo Morcillo, 4 28029 Madrid Spain Phone: +34-91-497-2412 Email: rdiaz02 at gmail.com ramon.diaz at iib.uam.es http://ligarto.org/rdiaz

...people might be using R or how many people have downloaded R, or similar (I am aware answering this question might require divinatory powers...). 2) Have/are any of you using R in papers in the biological sciences (specially evolutionary biology, ecology, behavior)? Thanks, Ramon -- Ramón Díaz-Uriarte Dept. Zoology and Statistics University of Wisconsin-Madison Madison, WI 53706-1381 email: rdiazuri at students.wisc.edu (NOTE: starting 15-July-2000 new email: ramon-diaz at teleline.es) phone: 608-238-8041 -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help ma...

...nnhl.o:nnhl.c:(.text+0x1451): more undefined references to `gzprintf' follow collect2: ld returned 1 exit status make[3]: *** [RJaCGH.dll] Error 1 make[2]: *** [srcDynlib] Error 2 make[1]: *** [all] Error 2 make: *** [pkg-RJaCGH] Error 2 *** Installation of RJaCGH failed *** -- Ramon Diaz-Uriarte Statistical Computing Team Structural Biology and Biocomputing Programme Spanish National Cancer Centre (CNIO) http://ligarto.org/rdiaz

...Under development (unstable) major 1 minor 2.0 year 2000 month 10 day 10 language R ******************** -- Ramón Díaz-Uriarte Triana 47 28016 Madrid Spain email:ramon-diaz@teleline.es Phone: +-34-918-513-966 +-34-657-186-407 -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-devel mailing list -- Read http://www.ci.tuwien.ac.at/~hornik/R/R-FAQ.html Send "info", &qu...

...h-lapack \ --enable-R-profiling \ --enable-R-shlib \ --build=x86_64-linux-gnu \ --with-tcl-config=/usr/lib/tcl8.5/tclConfig.sh \ --with-tk-config=/usr/lib/tk8.5/tkConfig.sh make -j8 Is this a know problem? Am I doing something wrong? Best, R. -- Ramon Diaz-Uriarte Department of Biochemistry, Lab B-25 Facultad de Medicina Universidad Aut?noma de Madrid Arzobispo Morcillo, 4 28029 Madrid Spain Phone: +34-91-497-2412 Email: rdiaz02 at gmail.com ramon.diaz at iib.uam.es http://ligarto.org/rdiaz

On Wed, 30-12-2015, at 21:08, Dirk Eddelbuettel <edd at debian.org> wrote: > On 30 December 2015 at 20:07, Ramon Diaz-Uriarte wrote: > | > | > | > | On Wed, 30-12-2015, at 12:44, Dirk Eddelbuettel <edd at debian.org> wrote: > | > On 30 December 2015 at 05:00, Dario Strbenac wrote: > | > | Good day, > | > | > | > | In section A.2, the manual advises "Linux users will want...

...eparse(min(x)))) but I'd like beta and rho to show up as greek letters. I have tried several combinations of "expression", "paste", "plain", and looked at the help for legend, text, and title, but I am not able to get it to work. Thank you, Ramon -- Ramon Diaz-Uriarte Dept. Zoology and Statistics University of Wisconsin-Madison Madison, WI 53706 email: rdiazuri at students.wisc.edu phone: 608-238-8041 -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list -- Read http://www.ci.tuwien.ac.at/~hornik/R/R-FAQ.html Send...

...;d rather avoid it if I can (all of the code seems working except for the return of values into R). Another would be to write to a file from C and then read that into R, but this looks very ugly. Are there any other reasonable alternatives, or should I just use .Call? Thanks, R. -- Ramon Diaz-Uriarte Statistical Computing Team Structural Biology and Biocomputing Programme Spanish National Cancer Centre (CNIO) http://ligarto.org/rdiaz