search for: toms708

...chisq.o pnf.o pnmath.o pnorm.o pnt.o polygamma.o ppois.o pt.o ptukey.o punif.o pweibull.o qbeta.o qbinom.o qcauchy.o qchisq.o qexp.o qf.o qgamma.o qgeom.o qhyper.o qlnorm.o qlogis.o qnbeta.o qnbinom.o qnchisq.o qnf.o qnorm.o qnt.o qpois.o qt.o qtukey.o qunif.o qweibull.o sign.o stirlerr.o toms708.o -lgomp -F/Library/Frameworks/R.framework/.. - framework R -Wl,-framework -Wl,CoreFoundation ld: warning, duplicate dylib /Developer/SDKs/MacOSX10.4u.sdk/usr/local/ lib/libgcc_s.1.dylib ** arch - ppc ... gcc -arch ppc -isysroot /Developer/SDKs/MacOSX10.4u.sdk -mmacosx- version-min=10.4 -std=gn...

...o) : error LNK2019: unresolved external symbol _log1p referenced in function _dbeta libRmath.a(qbeta.o) : error LNK2019: unresolved external symbol _log1p referenced in function _qbeta libRmath.a(lbeta.o) : error LNK2019: unresolved external symbol _log1p referenced in function _lbeta libRmath.a(toms708.o) : error LNK2001: unresolved external symbol _log1p libRmath.a(qbeta.o) : error LNK2019: unresolved external symbol _expm1 referenced in function _qbeta libRmath.a(mlutils.o) : error LNK2019: unresolved external symbol ___fpclassify referenced in function _R_pow ../Debug/complex_plugin.dll : f...

...o rgeom.o dhyper.o phyper.o qhyper.o rhyper.o dnbinom.o pnbinom.o qnbinom.o rnbinom.o dpois.o ppois.o qpois.o rpois.o dweibull.o pweibull.o qweibull.o rweibull.o dlogis.o plogis.o qlogis.o rlogis.o dnchisq.o pnchisq.o qnchisq.o dnbeta.o pnbeta.o qnbeta.o pnf.o pnt.o qnf.o qnt.o ptukey.o qtukey.o toms708.o wilcox.o signrank.o ranlib libnmath.a config.status: creating src/unix/Makefile make: /usr/local/R-devel/srcunix: No such file or directory *** Error code 2 Stop in /usr/local/R-devel/src/unix. *** Error code 1 Stop in /usr/local/R-devel/src. *** Error code 1 Stop in /usr/local/R-devel. ------...

I've discovered an infelicity (I guess) in qbeta(): it's not a bug, since there's a clear warning about lack of convergence of the numerical algorithm ("full precision may not have been achieved"). I can work around this, but I'm curious why it happens and whether there's a better workaround -- it doesn't seem to be in a particularly extreme corner of parameter

...pbeta() has *several* "dangerous" corners in its parameter spaces {in some cases, it makes sense to look at the 4 different cases log.p = TRUE/FALSE // lower.tail = TRUE/FALSE separately ..} pbeta() itself is based on the most complex numerical code in all of base R, i.e., src/nmath/toms708.c and that algorithm (TOMS 708) had been sophisticated already when it was published, and it has been improved and tweaked several times since being part of R, notably for the log.p=TRUE case which had not been in the focus of the publication and its algorithm. [[ NB: part of this you can read whe...

.... Kramer, analysis and suggested fix by Bill Dunlap.) o Some extreme cases of pbeta(log.p = TRUE) are more accurate (finite values < -700 rather than -Inf). (PR#13786) pbeta() now reports on more cases where the asymptotic expansions lose accuracy (the underlying TOMS708 C code was ignoring some of these, including the PR#13786 example). o new.env(hash = TRUE, size = NA) now works the way it has been documented to for a long time. o tcltk::tk_choose.files(multi = TRUE) produces better-formatted output with filenames containing...

.... Kramer, analysis and suggested fix by Bill Dunlap.) o Some extreme cases of pbeta(log.p = TRUE) are more accurate (finite values < -700 rather than -Inf). (PR#13786) pbeta() now reports on more cases where the asymptotic expansions lose accuracy (the underlying TOMS708 C code was ignoring some of these, including the PR#13786 example). o new.env(hash = TRUE, size = NA) now works the way it has been documented to for a long time. o tcltk::tk_choose.files(multi = TRUE) produces better-formatted output with filenames containing...

Hi! I'm trying to compile R (32-bit) on Solaris 10 x86 using Sun Studio 10 + Sun Perflib (for BLAS and LAPACK) but encountered issues with undefined symbol "bratio". Appreciate any help. Compiler options (from configure output): ============================================== R is now configured for i386-pc-solaris2.10 Source directory: . Installation directory:

...uot;dangerous" corners in its parameter spaces > {in some cases, it makes sense to look at the 4 different cases > log.p = TRUE/FALSE // lower.tail = TRUE/FALSE separately ..} > > pbeta() itself is based on the most complex numerical code in > all of base R, i.e., src/nmath/toms708.c and that algorithm > (TOMS 708) had been sophisticated already when it was published, > and it has been improved and tweaked several times since being > part of R, notably for the log.p=TRUE case which had not been in > the focus of the publication and its algorithm. > [[ NB: part...

...om.o rgeom.o dhyper.o phyper.o qhyper.o rhyper.o dnbinom.o pnbinom.o qnbinom.o rnbinom.o dpois.o ppois.o qpois.o rpois.o dweibull.o pweibull.o qweibull.o rweibull.o dlogis.o plogis.o qlogis.o rlogis.o dnchisq.o pnchisq.o qnchisq.o dnbeta.o pnbeta.o qnbeta.o pnf.o pnt.o qnf.o qnt.o ptukey.o qtukey.o toms708.o wilcox.o signrank.o* *ranlib libnmath.a* *make[4]: Leaving directory `/data/mbp15ja/R-3.4.1/R-3.4.1/src/nmath'* *make[3]: *** No rule to make target `../extra/tre/libtre.a', needed by `libR.so'. Stop.* *make[3]: Leaving directory `/data/mbp15ja/R-3.4.1/R-3.4.1/src/main'* *make[2]...

Please note that building R on Windows is documented in "R Installation and Administration", including links to external software. Particularly there is a link to texinfo which is part of Rtools. The documentation is maintained and it is a sufficient source of information for building R on Windows. https://cran.r-project.org/doc/manuals/r-release/R-admin.html

...from pnchisq.c making qnchisq.d from qnchisq.c making dnbeta.d from dnbeta.c making pnbeta.d from pnbeta.c making qnbeta.d from qnbeta.c making pnf.d from pnf.c making pnt.d from pnt.c making qnf.d from qnf.c making qnt.d from qnt.c making ptukey.d from ptukey.c making qtukey.d from qtukey.c making toms708.d from toms708.c making wilcox.d from wilcox.c making signrank.d from signrank.c make[3]: Leaving directory `/dev/shm/portage/dev-lang/R-2.15.1/work/R-2.15.1/src/nmath' make[3]: Entering directory `/dev/shm/portage/dev-lang/R-2.15.1/work/R-2.15.1/src/nmath' x86_64-alpine-linux-uclibc-gcc -s...

...from pnchisq.c making qnchisq.d from qnchisq.c making dnbeta.d from dnbeta.c making pnbeta.d from pnbeta.c making qnbeta.d from qnbeta.c making pnf.d from pnf.c making pnt.d from pnt.c making qnf.d from qnf.c making qnt.d from qnt.c making ptukey.d from ptukey.c making qtukey.d from qtukey.c making toms708.d from toms708.c making wilcox.d from wilcox.c making signrank.d from signrank.c gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c mlutils.c -o mlutils.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include...

...New function Axis(), a generic version of axis(), with Date and POSIX[cl]t methods. This is used by most of the standard plotting functions (boxplot, contour, coplot, filled.contour, pairs, plot.default, rug, stripchart) which will thus label x or y axes appropriately. o pbeta() now uses TOMS708 in all cases and so is more accurate in some (e.g. when lower.tail = FALSE and when one of the shape parameters is very small). o [qr]beta(), [qr]f() and [qr]t() now have a non-centrality parameter. o [rc]bind and some more cases of subassignment are implemented for raw matrices. (PR8...

...New function Axis(), a generic version of axis(), with Date and POSIX[cl]t methods. This is used by most of the standard plotting functions (boxplot, contour, coplot, filled.contour, pairs, plot.default, rug, stripchart) which will thus label x or y axes appropriately. o pbeta() now uses TOMS708 in all cases and so is more accurate in some (e.g. when lower.tail = FALSE and when one of the shape parameters is very small). o [qr]beta(), [qr]f() and [qr]t() now have a non-centrality parameter. o [rc]bind and some more cases of subassignment are implemented for raw matrices. (PR8...

...from pnchisq.c making qnchisq.d from qnchisq.c making dnbeta.d from dnbeta.c making pnbeta.d from pnbeta.c making qnbeta.d from qnbeta.c making pnf.d from pnf.c making pnt.d from pnt.c making qnf.d from qnf.c making qnt.d from qnt.c making ptukey.d from ptukey.c making qtukey.d from qtukey.c making toms708.d from toms708.c making wilcox.d from wilcox.c making signrank.d from signrank.c gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c mlutils.c -o mlutils.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include...