hello,
i am trying to build R on alpine/gentoo and it fails with the following
error msg:
connections.c: In function 'Rconn_fgetc':
connections.c:3184:11: error: expected identifier before '(' token
connections.c:3186:15: error: expected identifier before '(' token
make[3]: *** [connections.o] Error 1
any idea?
[see the attached file for a complete build log.]
i've walked back the versions down to 2.14.1 and i still get exact same
error msg.
couple of patches are applied which i will attach as well, but if you
find it too complicated, i can build from source by hand, if need be.
thanks
-------------- next part --------------
[32;01m * [39;49;00mPackage: dev-lang/R-2.15.1
[32;01m * [39;49;00mRepository: gentoo
[32;01m * [39;49;00mMaintainer: calchan at gentoo.org sci-mathematics at
gentoo.org
[32;01m * [39;49;00mUSE: X amd64 elibc_uclibc kernel_linux minimal openmp
readline userland_GNU
[32;01m * [39;49;00mFEATURES: fakeroot preserve-libs sandbox userpriv
usersandbox>>> cfg-update-1.8.2-r1: Creating checksum index...
>>> Unpacking source...
>>> Unpacking R-2.15.1.tar.gz to
/dev/shm/portage/dev-lang/R-2.15.1/work
>>> Source unpacked in /dev/shm/portage/dev-lang/R-2.15.1/work
>>> Preparing source in
/dev/shm/portage/dev-lang/R-2.15.1/work/R-2.15.1 ...
[32;01m* Applying R-2.11.1-parallel.patch ...
[A[152C [34;01m[ [32;01mok[34;01m ]
[32;01m* Applying R-2.12.1-ldflags.patch ...
[A[152C [34;01m[ [32;01mok[34;01m ]
[32;01m* Applying R-2.13.1-zlib_header_fix.patch ...
[A[152C [34;01m[ [32;01mok[34;01m ]
[32;01m* Applying R-2.14.1-tiff.patch ...
[A[152C [34;01m[ [32;01mok[34;01m ]
[32;01m* Applying R-2.14.1-rmath-shared.patch ...
[A[152C [34;01m[ [32;01mok[34;01m ]
[32;01m* Running aclocal -I m4 ...
[A[152C [34;01m[ [32;01mok[34;01m ]
[32;01m* Running autoconf ...
[A[152C [34;01m[ [32;01mok[34;01m ]>>> Source prepared.
>>> Configuring source in
/dev/shm/portage/dev-lang/R-2.15.1/work/R-2.15.1 ...
* econf: updating R-2.15.1/tools/config.sub with
/usr/share/gnuconfig/config.sub
* econf: updating R-2.15.1/tools/config.guess with
/usr/share/gnuconfig/config.guess
./configure --prefix=/usr --build=x86_64-alpine-linux-uclibc
--host=x86_64-alpine-linux-uclibc --mandir=/usr/share/man
--infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc
--localstatedir=/var/lib --enable-byte-compiled-packages --enable-R-shlib
--disable-R-framework --with-system-zlib --with-system-bzlib --with-system-pcre
--with-system-xz --with-blas=-L/usr/lib/blas/reference -lblas
--docdir=/usr/share/doc/R-2.15.1 rdocdir=/usr/share/doc/R-2.15.1 --disable-nls
--enable-openmp --disable-R-profiling --disable-memory-profiling
--disable-static --disable-R-static-lib --without-cairo --without-ICU
--without-jpeglib --without-lapack --without-recommended-packages
--without-libpng --with-readline --without-libtiff --without-tcltk --with-x
configure: loading site script /usr/share/config.site
configure: loading site script /usr/share/crossdev/include/site/linux
configure: loading site script /usr/share/crossdev/include/site/linux-uclibc
configure: loading site script
/usr/share/crossdev/include/site/x86_64-linux-uclibc
checking build system type... x86_64-alpine-linux-uclibc
checking host system type... x86_64-alpine-linux-uclibc
loading site script './config.site'
loading build-specific script './config.site'
checking for pwd... /bin/pwd
checking whether builddir is srcdir... yes
checking for working aclocal... found
checking for working autoconf... found
checking for working automake... found
checking for working autoheader... found
checking for gawk... gawk
checking whether ln -s works... yes
checking for bison... bison -y
checking for ar... ar
checking for a BSD-compatible install... /usr/bin/install -c
checking for sed... /usr/lib/portage/bin/ebuild-helpers/sed
checking for which... /usr/bin/which
checking for less... /usr/bin/less
checking for gtar... no
checking for gnutar... no
checking for tar... /bin/tar
checking for tex... no
checking for pdftex... no
configure: WARNING: you cannot build PDF versions of the R manuals
checking for pdflatex... no
configure: WARNING: you cannot build PDF versions of vignettes and help pages
checking for makeindex... no
checking for makeinfo... /usr/bin/makeinfo
checking whether makeinfo version is at least 4.7... yes
checking for ginstall-info... no
checking for install-info... /usr/bin/install-info
checking for texi2dvi... /usr/bin/texi2dvi
checking for kpsewhich... no
checking for unzip... /usr/bin/unzip
checking for zip... /usr/bin/zip
checking for gzip... /bin/gzip
checking for bzip2... /usr/bin/bzip2
using default browser ... /usr/bin/xdg-open
checking for /usr/bin/xdg-open... /usr/bin/xdg-open
checking for notangle... false
checking for pkg-config... /usr/bin/pkg-config
checking for x86_64-alpine-linux-uclibc-gcc... x86_64-alpine-linux-uclibc-gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether x86_64-alpine-linux-uclibc-gcc accepts -g... yes
checking for x86_64-alpine-linux-uclibc-gcc option to accept ISO C89... none
needed
checking how to run the C preprocessor... x86_64-alpine-linux-uclibc-gcc -E
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking whether x86_64-alpine-linux-uclibc-gcc needs -traditional... no
checking how to run the C preprocessor... x86_64-alpine-linux-uclibc-gcc -E
defining F77 to be x86_64-alpine-linux-uclibc-gfortran
checking for x86_64-alpine-linux-uclibc-g77...
x86_64-alpine-linux-uclibc-gfortran
checking whether we are using the GNU Fortran 77 compiler... yes
checking whether x86_64-alpine-linux-uclibc-gfortran accepts -g... yes
checking for x86_64-alpine-linux-uclibc-g++... x86_64-alpine-linux-uclibc-g++
checking whether we are using the GNU C++ compiler... yes
checking whether x86_64-alpine-linux-uclibc-g++ accepts -g... yes
checking how to run the C++ preprocessor... x86_64-alpine-linux-uclibc-g++ -E
checking whether __attribute__((visibility())) is supported... yes
checking whether x86_64-alpine-linux-uclibc-gcc accepts -fvisibility... yes
checking whether x86_64-alpine-linux-uclibc-gfortran accepts -fvisibility... yes
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking minix/config.h usability... no
checking minix/config.h presence... no
checking for minix/config.h... no
checking whether it is safe to define __EXTENSIONS__... yes
checking for x86_64-alpine-linux-uclibc-gcc... x86_64-alpine-linux-uclibc-gcc
checking whether we are using the GNU Objective C compiler... yes
checking whether x86_64-alpine-linux-uclibc-gcc accepts -g... yes
checking for Objective C++ compiler... trying some possibilities
checking whether x86_64-alpine-linux-uclibc-g++ can compile ObjC++... no
no working compiler found
checking for a sed that does not truncate output... (cached)
/usr/lib/portage/bin/ebuild-helpers/sed
checking for fgrep... /bin/grep -F
checking for ld used by x86_64-alpine-linux-uclibc-gcc...
/usr/x86_64-alpine-linux-uclibc/bin/ld
checking if the linker (/usr/x86_64-alpine-linux-uclibc/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking the maximum length of command line arguments... 1572864
checking whether the shell understands some XSI constructs... yes
checking whether the shell understands "+="... yes
checking for /usr/x86_64-alpine-linux-uclibc/bin/ld option to reload object
files... -r
checking for x86_64-alpine-linux-uclibc-objdump...
x86_64-alpine-linux-uclibc-objdump
checking how to recognize dependent libraries... pass_all
checking for x86_64-alpine-linux-uclibc-ar... (cached) ar
checking for x86_64-alpine-linux-uclibc-strip...
x86_64-alpine-linux-uclibc-strip
checking for x86_64-alpine-linux-uclibc-ranlib...
x86_64-alpine-linux-uclibc-ranlib
checking command to parse /usr/bin/nm -B output from
x86_64-alpine-linux-uclibc-gcc object... ok
checking for dlfcn.h... yes
checking whether we are using the GNU C++ compiler... (cached) yes
checking whether x86_64-alpine-linux-uclibc-g++ accepts -g... (cached) yes
checking how to run the C++ preprocessor... x86_64-alpine-linux-uclibc-g++ -E
checking for x86_64-alpine-linux-uclibc-g77... (cached)
x86_64-alpine-linux-uclibc-gfortran
checking whether we are using the GNU Fortran 77 compiler... (cached) yes
checking whether x86_64-alpine-linux-uclibc-gfortran accepts -g... (cached) yes
checking for objdir... .libs
checking if x86_64-alpine-linux-uclibc-gcc supports -fno-rtti -fno-exceptions...
no
checking for x86_64-alpine-linux-uclibc-gcc option to produce PIC... -fPIC -DPIC
checking if x86_64-alpine-linux-uclibc-gcc PIC flag -fPIC -DPIC works... yes
checking if x86_64-alpine-linux-uclibc-gcc static flag -static works... yes
checking if x86_64-alpine-linux-uclibc-gcc supports -c -o file.o... yes
checking if x86_64-alpine-linux-uclibc-gcc supports -c -o file.o... (cached) yes
checking whether the x86_64-alpine-linux-uclibc-gcc linker
(/usr/x86_64-alpine-linux-uclibc/bin/ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for ld used by x86_64-alpine-linux-uclibc-g++...
/usr/x86_64-alpine-linux-uclibc/bin/ld
checking if the linker (/usr/x86_64-alpine-linux-uclibc/bin/ld) is GNU ld... yes
checking whether the x86_64-alpine-linux-uclibc-g++ linker
(/usr/x86_64-alpine-linux-uclibc/bin/ld) supports shared libraries... yes
checking for x86_64-alpine-linux-uclibc-g++ option to produce PIC... -fPIC -DPIC
checking if x86_64-alpine-linux-uclibc-g++ PIC flag -fPIC -DPIC works... yes
checking if x86_64-alpine-linux-uclibc-g++ static flag -static works... yes
checking if x86_64-alpine-linux-uclibc-g++ supports -c -o file.o... yes
checking if x86_64-alpine-linux-uclibc-g++ supports -c -o file.o... (cached) yes
checking whether the x86_64-alpine-linux-uclibc-g++ linker
(/usr/x86_64-alpine-linux-uclibc/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for x86_64-alpine-linux-uclibc-gfortran option to produce PIC... -fPIC
checking if x86_64-alpine-linux-uclibc-gfortran PIC flag -fPIC works... yes
checking if x86_64-alpine-linux-uclibc-gfortran static flag -static works... no
checking if x86_64-alpine-linux-uclibc-gfortran supports -c -o file.o... yes
checking if x86_64-alpine-linux-uclibc-gfortran supports -c -o file.o...
(cached) yes
checking whether the x86_64-alpine-linux-uclibc-gfortran linker
(/usr/x86_64-alpine-linux-uclibc/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking for cos in -lm... yes
checking for sin in -lm... yes
checking for dlopen in -ldl... yes
checking readline/history.h usability... yes
checking readline/history.h presence... yes
checking for readline/history.h... yes
checking readline/readline.h usability... yes
checking readline/readline.h presence... yes
checking for readline/readline.h... yes
checking for rl_callback_read_char in -lreadline... yes
checking for history_truncate_file... yes
checking whether rl_completion_matches exists and is declared... yes
checking for ANSI C header files... (cached) yes
checking for dirent.h that defines DIR... yes
checking for library containing opendir... none required
checking for sys/wait.h that is POSIX.1 compatible... yes
checking arpa/inet.h usability... yes
checking arpa/inet.h presence... yes
checking for arpa/inet.h... yes
checking dl.h usability... no
checking dl.h presence... no
checking for dl.h... no
checking for dlfcn.h... (cached) yes
checking elf.h usability... yes
checking elf.h presence... yes
checking for elf.h... yes
checking fcntl.h usability... yes
checking fcntl.h presence... yes
checking for fcntl.h... yes
checking floatingpoint.h usability... no
checking floatingpoint.h presence... no
checking for floatingpoint.h... no
checking fpu_control.h usability... yes
checking fpu_control.h presence... yes
checking for fpu_control.h... yes
checking glob.h usability... yes
checking glob.h presence... yes
checking for glob.h... yes
checking grp.h usability... yes
checking grp.h presence... yes
checking for grp.h... yes
checking netdb.h usability... yes
checking netdb.h presence... yes
checking for netdb.h... yes
checking netinet/in.h usability... yes
checking netinet/in.h presence... yes
checking for netinet/in.h... yes
checking for pwd.h... (cached) yes
checking for strings.h... (cached) yes
checking sys/param.h usability... yes
checking sys/param.h presence... yes
checking for sys/param.h... yes
checking sys/resource.h usability... yes
checking sys/resource.h presence... yes
checking for sys/resource.h... yes
checking sys/select.h usability... yes
checking sys/select.h presence... yes
checking for sys/select.h... yes
checking sys/socket.h usability... yes
checking sys/socket.h presence... yes
checking for sys/socket.h... yes
checking for sys/stat.h... (cached) yes
checking sys/time.h usability... yes
checking sys/time.h presence... yes
checking for sys/time.h... yes
checking sys/times.h usability... yes
checking sys/times.h presence... yes
checking for sys/times.h... yes
checking sys/utsname.h usability... yes
checking sys/utsname.h presence... yes
checking for sys/utsname.h... yes
checking for unistd.h... (cached) yes
checking utime.h usability... yes
checking utime.h presence... yes
checking for utime.h... yes
checking errno.h usability... yes
checking errno.h presence... yes
checking for errno.h... yes
checking for inttypes.h... (cached) yes
checking limits.h usability... yes
checking limits.h presence... yes
checking for limits.h... yes
checking locale.h usability... yes
checking locale.h presence... yes
checking for locale.h... yes
checking stdarg.h usability... yes
checking stdarg.h presence... yes
checking for stdarg.h... yes
checking stdbool.h usability... yes
checking stdbool.h presence... yes
checking for stdbool.h... yes
checking for stdint.h... (cached) yes
checking for string.h... (cached) yes
checking whether setjmp.h is POSIX.1 compatible... yes
checking whether sigsetjmp is declared... yes
checking whether siglongjmp is declared... yes
checking for GNU C library with version >= 2... yes
checking return type of signal handlers... void
checking for uint64_t... yes
checking for pid_t... yes
checking for size_t... yes
checking whether SIZE_MAX is declared... yes
checking for blkcnt_t... yes
checking for type of socket length... socklen_t *
checking for stack_t... yes
checking for intptr_t... yes
checking for uintptr_t... yes
checking whether byte ordering is bigendian... (cached) no
checking for an ANSI C-conforming const... yes
checking for x86_64-alpine-linux-uclibc-gcc option to accept ISO C99...
-std=gnu99
checking for x86_64-alpine-linux-uclibc-gcc -std=gnu99 option to accept ISO
Standard C... (cached) -std=gnu99
checking for inline... inline
checking size of int... (cached) 4
checking size of long... (cached) 8
checking size of long long... (cached) 8
checking size of double... 8
checking size of long double... 16
checking size of size_t... (cached) 4
checking whether we can compute C Make dependencies... yes, using
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -MM
checking whether x86_64-alpine-linux-uclibc-gcc -std=gnu99 supports -c -o
FILE.lo... yes
checking for x86_64-alpine-linux-uclibc-gcc -std=gnu99 option to support
OpenMP... -fopenmp
checking how to get verbose linking output from
x86_64-alpine-linux-uclibc-gfortran... -v
checking for Fortran 77 libraries of x86_64-alpine-linux-uclibc-gfortran...
-L/usr/lib/gcc/x86_64-alpine-linux-uclibc/4.6.3
-L/usr/lib/gcc/x86_64-alpine-linux-uclibc/4.6.3/../../../../x86_64-alpine-linux-uclibc/lib/../lib
-L/usr/lib/gcc/x86_64-alpine-linux-uclibc/4.6.3/../../../../lib -L/lib/../lib
-L/usr/lib/../lib
-L/usr/lib/gcc/x86_64-alpine-linux-uclibc/4.6.3/../../../../x86_64-alpine-linux-uclibc/lib
-L/usr/lib/gcc/x86_64-alpine-linux-uclibc/4.6.3/../../.. -lgfortran -lm
-lquadmath
checking how to get verbose linking output from x86_64-alpine-linux-uclibc-gcc
-std=gnu99... -v
checking for C libraries of x86_64-alpine-linux-uclibc-gcc -std=gnu99...
-L/usr/lib/gcc/x86_64-alpine-linux-uclibc/4.6.3
-L/usr/lib/gcc/x86_64-alpine-linux-uclibc/4.6.3/../../../../x86_64-alpine-linux-uclibc/lib/../lib
-L/usr/lib/gcc/x86_64-alpine-linux-uclibc/4.6.3/../../../../lib -L/lib/../lib
-L/usr/lib/../lib
-L/usr/lib/gcc/x86_64-alpine-linux-uclibc/4.6.3/../../../../x86_64-alpine-linux-uclibc/lib
-L/usr/lib/gcc/x86_64-alpine-linux-uclibc/4.6.3/../../.. -lgcc_s
checking for dummy main to link with Fortran 77 libraries... none
checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra
underscore
checking whether x86_64-alpine-linux-uclibc-gfortran appends underscores to
external names... yes
checking whether x86_64-alpine-linux-uclibc-gfortran appends extra underscores
to external names... no
checking whether mixed C/Fortran code can be run... yes
checking whether x86_64-alpine-linux-uclibc-gfortran and
x86_64-alpine-linux-uclibc-gcc -std=gnu99 agree on int and double... yes
checking whether x86_64-alpine-linux-uclibc-gfortran and
x86_64-alpine-linux-uclibc-gcc -std=gnu99 agree on double complex... yes
checking for x86_64-alpine-linux-uclibc-gfortran option to support OpenMP...
-fopenmp
checking whether x86_64-alpine-linux-uclibc-g++ accepts -M for generating
dependencies... yes
checking for x86_64-alpine-linux-uclibc-g++ option to support OpenMP... -fopenmp
checking whether we can compute ObjC Make dependencies... yes, using
x86_64-alpine-linux-uclibc-gcc -MM
checking for ObjC runtime library... -lobjc
checking for ObjC runtime style... gnu
checking whether x86_64-alpine-linux-uclibc-gcc accepts -fobjc-exceptions... yes
checking whether C runtime needs -D__NO_MATH_INLINES... no
checking for xmkmf... no
checking for off_t... yes
checking for working alloca.h... yes
checking for alloca... yes
checking whether alloca is declared... yes
checking whether expm1 exists and is declared... yes
checking whether hypot exists and is declared... yes
checking whether log1p exists and is declared... yes
checking whether log2 exists and is declared... yes
checking whether log10 exists and is declared... yes
checking whether nearbyint exists and is declared... yes
checking whether nearbyintl exists and is declared... yes
checking whether powl exists and is declared... yes
checking whether rint exists and is declared... yes
checking whether rintl exists and is declared... yes
checking whether va_copy exists and is declared... yes
checking for isblank... yes
checking for fseeko... yes
checking for ftello... yes
checking for matherr... no
checking whether fcntl exists and is declared... yes
checking whether getgrgid exists and is declared... yes
checking whether getpwuid exists and is declared... yes
checking whether kill exists and is declared... yes
checking whether sigaction exists and is declared... yes
checking whether sigaltstack exists and is declared... yes
checking whether sigemptyset exists and is declared... yes
checking whether fdopen exists and is declared... yes
checking whether popen exists and is declared... yes
checking whether setenv exists and is declared... yes
checking whether unsetenv exists and is declared... yes
checking whether getrlimit exists and is declared... yes
checking whether getrusage exists and is declared... yes
checking whether getpriority exists and is declared... yes
checking whether chmod exists and is declared... yes
checking whether mkfifo exists and is declared... yes
checking whether stat exists and is declared... yes
checking whether umask exists and is declared... yes
checking whether gettimeofday exists and is declared... yes
checking whether utimes exists and is declared... yes
checking whether times exists and is declared... yes
checking whether access exists and is declared... yes
checking whether chdir exists and is declared... yes
checking whether execv exists and is declared... yes
checking whether ftruncate exists and is declared... yes
checking whether getcwd exists and is declared... yes
checking whether geteuid exists and is declared... yes
checking whether getuid exists and is declared... yes
checking whether link exists and is declared... yes
checking whether readlink exists and is declared... yes
checking whether symlink exists and is declared... yes
checking whether sysconf exists and is declared... yes
checking whether utime exists and is declared... yes
checking whether clock_gettime exists and is declared... yes
checking whether timespec_get exists and is declared... no
checking for clock_gettime in -lrt... yes
checking for putenv... yes
checking whether putenv is declared... yes
checking for vasprintf... yes
checking whether vasprintf is declared... yes
checking for mempcpy... yes
checking for realpath... yes
checking whether realpath is declared... yes
checking whether glob exists and is declared... yes
checking for isnan... no
checking whether isfinite is declared... yes
checking whether isnan is declared... yes
checking whether you have IEEE 754 floating-point arithmetic... yes
checking whether putenv("FOO") can unset an environment variable...
yes
checking whether putenv("FOO=") can unset an environment variable...
no
checking for nl_langinfo and CODESET... yes
checking for mkdtemp... yes
checking for strdup... yes
checking for strncasecmp... yes
checking whether mkdtemp is declared... yes
checking whether strdup is declared... yes
checking whether strncasecmp is declared... yes
checking for library containing connect... none required
checking for library containing gethostbyname... none required
checking for library containing xdr_string... none required
checking for __setfpucw... no
checking for working calloc... yes
checking for working isfinite... yes
checking for working log1p... yes
checking whether ftell works correctly on files opened for append... no
checking for working sigaction... yes
checking whether mktime sets errno... no
checking complex.h usability... yes
checking complex.h presence... yes
checking for complex.h... yes
checking for double complex... yes
checking whether C99 double complex is supported... yes
checking whether cabs exists and is declared... yes
checking whether carg exists and is declared... yes
checking whether cexp exists and is declared... yes
checking whether clog exists and is declared... yes
checking whether csqrt exists and is declared... yes
checking whether cpow exists and is declared... yes
checking whether ccos exists and is declared... yes
checking whether csin exists and is declared... yes
checking whether ctan exists and is declared... yes
checking whether cacos exists and is declared... yes
checking whether casin exists and is declared... yes
checking whether catan exists and is declared... yes
checking whether ccosh exists and is declared... yes
checking whether csinh exists and is declared... yes
checking whether ctanh exists and is declared... yes
checking for cblas_cdotu_sub in vecLib framework... no
checking for dgemm_ in -L/usr/lib/blas/reference -lblas ... yes
checking whether double complex BLAS can be used... yes
checking whether the BLAS is complete... yes
checking iconv.h usability... yes
checking iconv.h presence... yes
checking for iconv.h... yes
checking for iconv... in libiconv
checking whether iconv accepts "UTF-8", "latin1",
"ASCII" and "UCS-*"... yes
checking for iconvlist... yes
checking for iconv... yes
checking for iconv declaration...
extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft,
char * *outbuf, size_t *outbytesleft);
checking wchar.h usability... yes
checking wchar.h presence... yes
checking for wchar.h... yes
checking wctype.h usability... yes
checking wctype.h presence... yes
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R is now configured for x86_64-alpine-linux-uclibc
Source directory: .
Installation directory: /usr
C compiler: x86_64-alpine-linux-uclibc-gcc -std=gnu99
-march=native -O3 -pipe -fomit-frame-pointer
Fortran 77 compiler: x86_64-alpine-linux-uclibc-gfortran -Os
C++ compiler: x86_64-alpine-linux-uclibc-g++ -march=native -O3
-pipe -fomit-frame-pointer
Fortran 90/95 compiler: x86_64-alpine-linux-uclibc-gfortran -Os
Obj-C compiler: x86_64-alpine-linux-uclibc-gcc -g -O2 -fobjc-exceptions
Interfaces supported: X11
External libraries: readline, BLAS(generic), lzma
Additional capabilities:
Options enabled: shared R library
Recommended packages: no
configure: WARNING: you cannot build PDF versions of the R manuals
configure: WARNING: you cannot build PDF versions of vignettes and help
pages>>> Source configured.
>>> Compiling source in
/dev/shm/portage/dev-lang/R-2.15.1/work/R-2.15.1 ...
make -j3
make[1]: Entering directory
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creating src/scripts/R.fe
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mkdir -p -- ../../bin
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mkdir -p -- ../../include
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mkdir -p -- ../../../include/R_ext
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make[2]: Entering directory
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make[3]: Entering directory
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make[4]: Entering directory
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making regcomp.d from regcomp.c
making regerror.d from regerror.c
making regexec.d from regexec.c
making tre-ast.d from tre-ast.c
making tre-compile.d from tre-compile.c
making tre-match-approx.d from tre-match-approx.c
making tre-match-backtrack.d from tre-match-backtrack.c
making tre-match-parallel.d from tre-match-parallel.c
making tre-mem.d from tre-mem.c
making tre-parse.d from tre-parse.c
making tre-stack.d from tre-stack.c
making xmalloc.d from xmalloc.c
make[4]: Leaving directory
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make[4]: Entering directory
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x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I. -I../../../src/include
-I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3
-pipe -fomit-frame-pointer -fvisibility=hidden -c regcomp.c -o regcomp.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I. -I../../../src/include
-I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3
-pipe -fomit-frame-pointer -fvisibility=hidden -c regerror.c -o regerror.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I. -I../../../src/include
-I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3
-pipe -fomit-frame-pointer -fvisibility=hidden -c regexec.c -o regexec.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I. -I../../../src/include
-I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3
-pipe -fomit-frame-pointer -fvisibility=hidden -c tre-ast.c -o tre-ast.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I. -I../../../src/include
-I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3
-pipe -fomit-frame-pointer -fvisibility=hidden -c tre-compile.c -o
tre-compile.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I. -I../../../src/include
-I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3
-pipe -fomit-frame-pointer -fvisibility=hidden -c tre-match-approx.c -o
tre-match-approx.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I. -I../../../src/include
-I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3
-pipe -fomit-frame-pointer -fvisibility=hidden -c tre-match-backtrack.c -o
tre-match-backtrack.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I. -I../../../src/include
-I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3
-pipe -fomit-frame-pointer -fvisibility=hidden -c tre-match-parallel.c -o
tre-match-parallel.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I. -I../../../src/include
-I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3
-pipe -fomit-frame-pointer -fvisibility=hidden -c tre-mem.c -o tre-mem.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I. -I../../../src/include
-I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3
-pipe -fomit-frame-pointer -fvisibility=hidden -c tre-parse.c -o tre-parse.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I. -I../../../src/include
-I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3
-pipe -fomit-frame-pointer -fvisibility=hidden -c tre-stack.c -o tre-stack.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I. -I../../../src/include
-I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3
-pipe -fomit-frame-pointer -fvisibility=hidden -c xmalloc.c -o xmalloc.o
rm -f libtre.a
ar cr libtre.a regcomp.o regerror.o regexec.o tre-ast.o tre-compile.o
tre-match-approx.o tre-match-backtrack.o tre-match-parallel.o tre-mem.o
tre-parse.o tre-stack.o xmalloc.o
x86_64-alpine-linux-uclibc-ranlib libtre.a
make[4]: Leaving directory
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make[3]: Leaving directory
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make[2]: Entering directory
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make[3]: Entering directory
`/dev/shm/portage/dev-lang/R-2.15.1/work/R-2.15.1/src/appl'
making bakslv.d from bakslv.c
making binning.d from binning.c
making cpoly.d from cpoly.c
making cumsum.d from cumsum.c
making fft.d from fft.c
making fmin.d from fmin.c
making integrate.d from integrate.c
making interv.d from interv.c
making lbfgsb.d from lbfgsb.c
making machar.d from machar.c
making maxcol.d from maxcol.c
making pretty.d from pretty.c
making rcont.d from rcont.c
making rowsum.d from rowsum.c
making stem.d from stem.c
making strsignif.d from strsignif.c
making tabulate.d from tabulate.c
making uncmin.d from uncmin.c
making zeroin.d from zeroin.c
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x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c bakslv.c -o bakslv.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c binning.c -o binning.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c cpoly.c -o cpoly.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c cumsum.c -o cumsum.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c fft.c -o fft.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c fmin.c -o fmin.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c integrate.c -o integrate.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c interv.c -o interv.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c lbfgsb.c -o lbfgsb.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c machar.c -o machar.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c maxcol.c -o maxcol.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c pretty.c -o pretty.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c rcont.c -o rcont.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c rowsum.c -o rowsum.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c stem.c -o stem.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c strsignif.c -o strsignif.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c tabulate.c -o tabulate.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c uncmin.c -o uncmin.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c zeroin.c -o zeroin.o
x86_64-alpine-linux-uclibc-gfortran -fopenmp -fpic -Os -c ch2inv.f -o
ch2inv.o
x86_64-alpine-linux-uclibc-gfortran -fopenmp -fpic -Os -c chol.f -o chol.o
x86_64-alpine-linux-uclibc-gfortran -fopenmp -fpic -Os -c dchdc.f -o dchdc.o
x86_64-alpine-linux-uclibc-gfortran -fopenmp -fpic -Os -c dpbfa.f -o dpbfa.o
x86_64-alpine-linux-uclibc-gfortran -fopenmp -fpic -Os -c dpbsl.f -o dpbsl.o
x86_64-alpine-linux-uclibc-gfortran -fopenmp -fpic -Os -c dpoco.f -o dpoco.o
x86_64-alpine-linux-uclibc-gfortran -fopenmp -fpic -Os -c dpodi.f -o dpodi.o
x86_64-alpine-linux-uclibc-gfortran -fopenmp -fpic -Os -c dpofa.f -o dpofa.o
x86_64-alpine-linux-uclibc-gfortran -fopenmp -fpic -Os -c dposl.f -o dposl.o
x86_64-alpine-linux-uclibc-gfortran -fopenmp -fpic -Os -c dqrdc.f -o dqrdc.o
x86_64-alpine-linux-uclibc-gfortran -fopenmp -fpic -Os -c dqrdc2.f -o
dqrdc2.o
x86_64-alpine-linux-uclibc-gfortran -fopenmp -fpic -Os -c dqrls.f -o dqrls.o
x86_64-alpine-linux-uclibc-gfortran -fopenmp -fpic -Os -c dqrsl.f -o dqrsl.o
x86_64-alpine-linux-uclibc-gfortran -fopenmp -fpic -Os -c dqrutl.f -o
dqrutl.o
x86_64-alpine-linux-uclibc-gfortran -fopenmp -fpic -Os -c dsvdc.f -o dsvdc.o
x86_64-alpine-linux-uclibc-gfortran -fopenmp -fpic -Os -c dtrco.f -o dtrco.o
x86_64-alpine-linux-uclibc-gfortran -fopenmp -fpic -Os -c dtrsl.f -o dtrsl.o
x86_64-alpine-linux-uclibc-gfortran -fopenmp -fpic -Os -c eigen.f -o eigen.o
rm -f libappl.a
ar cr libappl.a bakslv.o binning.o cpoly.o cumsum.o fft.o fmin.o integrate.o
interv.o lbfgsb.o machar.o maxcol.o pretty.o rcont.o rowsum.o stem.o strsignif.o
tabulate.o uncmin.o zeroin.o ch2inv.o chol.o dchdc.o dpbfa.o dpbsl.o dpoco.o
dpodi.o dpofa.o dposl.o dqrdc.o dqrdc2.o dqrls.o dqrsl.o dqrutl.o dsvdc.o
dtrco.o dtrsl.o eigen.o
x86_64-alpine-linux-uclibc-ranlib libappl.a
make[3]: Leaving directory
`/dev/shm/portage/dev-lang/R-2.15.1/work/R-2.15.1/src/appl'
make[2]: Leaving directory
`/dev/shm/portage/dev-lang/R-2.15.1/work/R-2.15.1/src/appl'
make[2]: Entering directory
`/dev/shm/portage/dev-lang/R-2.15.1/work/R-2.15.1/src/nmath'
make[3]: Entering directory
`/dev/shm/portage/dev-lang/R-2.15.1/work/R-2.15.1/src/nmath'
making mlutils.d from mlutils.c
making d1mach.d from d1mach.c
making i1mach.d from i1mach.c
making fmax2.d from fmax2.c
making fmin2.d from fmin2.c
making fprec.d from fprec.c
making fround.d from fround.c
making ftrunc.d from ftrunc.c
making sign.d from sign.c
making fsign.d from fsign.c
making imax2.d from imax2.c
making imin2.d from imin2.c
making chebyshev.d from chebyshev.c
making log1p.d from log1p.c
making expm1.d from expm1.c
making lgammacor.d from lgammacor.c
making gammalims.d from gammalims.c
making stirlerr.d from stirlerr.c
making bd0.d from bd0.c
making gamma.d from gamma.c
making lgamma.d from lgamma.c
making gamma_cody.d from gamma_cody.c
making beta.d from beta.c
making lbeta.d from lbeta.c
making polygamma.d from polygamma.c
making bessel_i.d from bessel_i.c
making bessel_j.d from bessel_j.c
making bessel_k.d from bessel_k.c
making bessel_y.d from bessel_y.c
making choose.d from choose.c
making snorm.d from snorm.c
making dgamma.d from dgamma.c
making sexp.d from sexp.c
making pgamma.d from pgamma.c
making qgamma.d from qgamma.c
making rgamma.d from rgamma.c
making dbeta.d from dbeta.c
making pbeta.d from pbeta.c
making qbeta.d from qbeta.c
making rbeta.d from rbeta.c
making dunif.d from dunif.c
making punif.d from punif.c
making qunif.d from qunif.c
making runif.d from runif.c
making dnorm.d from dnorm.c
making pnorm.d from pnorm.c
making qnorm.d from qnorm.c
making rnorm.d from rnorm.c
making dlnorm.d from dlnorm.c
making plnorm.d from plnorm.c
making qlnorm.d from qlnorm.c
making rlnorm.d from rlnorm.c
making df.d from df.c
making pf.d from pf.c
making qf.d from qf.c
making rf.d from rf.c
making dnf.d from dnf.c
making dt.d from dt.c
making pt.d from pt.c
making qt.d from qt.c
making rt.d from rt.c
making dnt.d from dnt.c
making dchisq.d from dchisq.c
making pchisq.d from pchisq.c
making qchisq.d from qchisq.c
making rchisq.d from rchisq.c
making rnchisq.d from rnchisq.c
making dbinom.d from dbinom.c
making pbinom.d from pbinom.c
making qbinom.d from qbinom.c
making rbinom.d from rbinom.c
making rmultinom.d from rmultinom.c
making dcauchy.d from dcauchy.c
making pcauchy.d from pcauchy.c
making qcauchy.d from qcauchy.c
making rcauchy.d from rcauchy.c
making dexp.d from dexp.c
making pexp.d from pexp.c
making qexp.d from qexp.c
making rexp.d from rexp.c
making dgeom.d from dgeom.c
making pgeom.d from pgeom.c
making qgeom.d from qgeom.c
making rgeom.d from rgeom.c
making dhyper.d from dhyper.c
making phyper.d from phyper.c
making qhyper.d from qhyper.c
making rhyper.d from rhyper.c
making dnbinom.d from dnbinom.c
making pnbinom.d from pnbinom.c
making qnbinom.d from qnbinom.c
making rnbinom.d from rnbinom.c
making dpois.d from dpois.c
making ppois.d from ppois.c
making qpois.d from qpois.c
making rpois.d from rpois.c
making dweibull.d from dweibull.c
making pweibull.d from pweibull.c
making qweibull.d from qweibull.c
making rweibull.d from rweibull.c
making dlogis.d from dlogis.c
making plogis.d from plogis.c
making qlogis.d from qlogis.c
making rlogis.d from rlogis.c
making dnchisq.d from dnchisq.c
making pnchisq.d from pnchisq.c
making qnchisq.d from qnchisq.c
making dnbeta.d from dnbeta.c
making pnbeta.d from pnbeta.c
making qnbeta.d from qnbeta.c
making pnf.d from pnf.c
making pnt.d from pnt.c
making qnf.d from qnf.c
making qnt.d from qnt.c
making ptukey.d from ptukey.c
making qtukey.d from qtukey.c
making toms708.d from toms708.c
making wilcox.d from wilcox.c
making signrank.d from signrank.c
make[3]: Leaving directory
`/dev/shm/portage/dev-lang/R-2.15.1/work/R-2.15.1/src/nmath'
make[3]: Entering directory
`/dev/shm/portage/dev-lang/R-2.15.1/work/R-2.15.1/src/nmath'
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c mlutils.c -o mlutils.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c d1mach.c -o d1mach.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c i1mach.c -o i1mach.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c fmax2.c -o fmax2.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c fmin2.c -o fmin2.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c fprec.c -o fprec.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c fround.c -o fround.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c ftrunc.c -o ftrunc.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c sign.c -o sign.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c fsign.c -o fsign.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c imax2.c -o imax2.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c imin2.c -o imin2.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c chebyshev.c -o chebyshev.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c log1p.c -o log1p.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c expm1.c -o expm1.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c lgammacor.c -o lgammacor.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c gammalims.c -o gammalims.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c stirlerr.c -o stirlerr.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c bd0.c -o bd0.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c gamma.c -o gamma.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c lgamma.c -o lgamma.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c gamma_cody.c -o gamma_cody.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c beta.c -o beta.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c lbeta.c -o lbeta.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c polygamma.c -o polygamma.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c bessel_i.c -o bessel_i.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c bessel_j.c -o bessel_j.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c bessel_k.c -o bessel_k.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c bessel_y.c -o bessel_y.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c choose.c -o choose.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c snorm.c -o snorm.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c sexp.c -o sexp.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c dgamma.c -o dgamma.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c pgamma.c -o pgamma.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c qgamma.c -o qgamma.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c rgamma.c -o rgamma.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c dbeta.c -o dbeta.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c pbeta.c -o pbeta.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c qbeta.c -o qbeta.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c rbeta.c -o rbeta.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c dunif.c -o dunif.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c punif.c -o punif.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c qunif.c -o qunif.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c runif.c -o runif.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c dnorm.c -o dnorm.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c pnorm.c -o pnorm.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c qnorm.c -o qnorm.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c rnorm.c -o rnorm.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c dlnorm.c -o dlnorm.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c plnorm.c -o plnorm.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c qlnorm.c -o qlnorm.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c rlnorm.c -o rlnorm.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c df.c -o df.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c pf.c -o pf.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c qf.c -o qf.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c rf.c -o rf.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c dnf.c -o dnf.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c dt.c -o dt.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c pt.c -o pt.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c qt.c -o qt.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c rt.c -o rt.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c dnt.c -o dnt.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c dchisq.c -o dchisq.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c pchisq.c -o pchisq.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c qchisq.c -o qchisq.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c rchisq.c -o rchisq.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c rnchisq.c -o rnchisq.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c dbinom.c -o dbinom.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c pbinom.c -o pbinom.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c qbinom.c -o qbinom.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c rbinom.c -o rbinom.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c rmultinom.c -o rmultinom.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c dcauchy.c -o dcauchy.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c pcauchy.c -o pcauchy.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c qcauchy.c -o qcauchy.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c rcauchy.c -o rcauchy.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c dexp.c -o dexp.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c pexp.c -o pexp.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c qexp.c -o qexp.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c rexp.c -o rexp.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c dgeom.c -o dgeom.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c pgeom.c -o pgeom.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c qgeom.c -o qgeom.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c rgeom.c -o rgeom.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c dhyper.c -o dhyper.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c phyper.c -o phyper.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c qhyper.c -o qhyper.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c rhyper.c -o rhyper.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c dnbinom.c -o dnbinom.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c pnbinom.c -o pnbinom.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c qnbinom.c -o qnbinom.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c rnbinom.c -o rnbinom.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c dpois.c -o dpois.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c ppois.c -o ppois.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c qpois.c -o qpois.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c rpois.c -o rpois.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c dweibull.c -o dweibull.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c pweibull.c -o pweibull.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c qweibull.c -o qweibull.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c rweibull.c -o rweibull.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c dlogis.c -o dlogis.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c plogis.c -o plogis.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c qlogis.c -o qlogis.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c rlogis.c -o rlogis.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c dnchisq.c -o dnchisq.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c pnchisq.c -o pnchisq.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c qnchisq.c -o qnchisq.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c dnbeta.c -o dnbeta.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c pnbeta.c -o pnbeta.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c qnbeta.c -o qnbeta.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c pnf.c -o pnf.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
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x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
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x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c qnt.c -o qnt.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c ptukey.c -o ptukey.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c qtukey.c -o qtukey.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c toms708.c -o toms708.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c wilcox.c -o wilcox.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
-fomit-frame-pointer -c signrank.c -o signrank.o
rm -rf libnmath.a
ar cr libnmath.a mlutils.o d1mach.o i1mach.o fmax2.o fmin2.o fprec.o fround.o
ftrunc.o sign.o fsign.o imax2.o imin2.o chebyshev.o log1p.o expm1.o lgammacor.o
gammalims.o stirlerr.o bd0.o gamma.o lgamma.o gamma_cody.o beta.o lbeta.o
polygamma.o bessel_i.o bessel_j.o bessel_k.o bessel_y.o choose.o snorm.o sexp.o
dgamma.o pgamma.o qgamma.o rgamma.o dbeta.o pbeta.o qbeta.o rbeta.o dunif.o
punif.o qunif.o runif.o dnorm.o pnorm.o qnorm.o rnorm.o dlnorm.o plnorm.o
qlnorm.o rlnorm.o df.o pf.o qf.o rf.o dnf.o dt.o pt.o qt.o rt.o dnt.o dchisq.o
pchisq.o qchisq.o rchisq.o rnchisq.o dbinom.o pbinom.o qbinom.o rbinom.o
rmultinom.o dcauchy.o pcauchy.o qcauchy.o rcauchy.o dexp.o pexp.o qexp.o rexp.o
dgeom.o pgeom.o qgeom.o rgeom.o dhyper.o phyper.o qhyper.o rhyper.o dnbinom.o
pnbinom.o qnbinom.o rnbinom.o dpois.o ppois.o qpois.o rpois.o dweibull.o
pweibull.o qweibull.o rweibull.o dlogis.o plogis.o qlogis.o rlogis.o dnchisq.o
pnchisq.o qnchisq.o dnbeta.o pnbeta.o qnbeta.o pnf.o pnt.o qnf.o qnt.o ptukey.o
qtukey.o toms708.o wilcox.o signrank.o
x86_64-alpine-linux-uclibc-ranlib libnmath.a
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making dynload.d from dynload.c
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x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
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x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
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x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
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x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
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x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
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x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
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x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
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x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
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x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
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rm -rf libunix.a
ar cr libunix.a dynload.o edit.o stubs.o system.o sys-unix.o sys-std.o X11.o
aqua.o Rembedded.o
x86_64-alpine-linux-uclibc-ranlib libunix.a
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x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I. -I../../src/include
-I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O3 -pipe
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making CConverters.d from CConverters.c
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making Rdynload.d from Rdynload.c
making Renviron.d from Renviron.c
making RNG.d from RNG.c
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making grep.d from grep.c
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making internet.d from internet.c
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making par.d from par.c
making paste.d from paste.c
making platform.d from platform.c
making plot.d from plot.c
making plot3d.d from plot3d.c
making plotmath.d from plotmath.c
making print.d from print.c
making printarray.d from printarray.c
making printvector.d from printvector.c
making printutils.d from printutils.c
making qsort.d from qsort.c
making random.d from random.c
making raw.d from raw.c
making registration.d from registration.c
making relop.d from relop.c
making rlocale.d from rlocale.c
making saveload.d from saveload.c
making scan.d from scan.c
making seq.d from seq.c
making serialize.d from serialize.c
making size.d from size.c
making sort.d from sort.c
making source.d from source.c
making split.d from split.c
making sprintf.d from sprintf.c
making startup.d from startup.c
making subassign.d from subassign.c
making subscript.d from subscript.c
making subset.d from subset.c
making summary.d from summary.c
making sysutils.d from sysutils.c
making unique.d from unique.c
making util.d from util.c
making version.d from version.c
making vfonts.d from vfonts.c
making Rmain.d from Rmain.c
making alloca.d from alloca.c
making mkdtemp.d from mkdtemp.c
making strdup.d from strdup.c
making strncasecmp.d from strncasecmp.c
make[3]: Leaving directory
`/dev/shm/portage/dev-lang/R-2.15.1/work/R-2.15.1/src/main'
make[3]: Entering directory
`/dev/shm/portage/dev-lang/R-2.15.1/work/R-2.15.1/src/main'
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I../../src/extra -I.
-I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic
-march=native -O3 -pipe -fomit-frame-pointer -c CConverters.c -o CConverters.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I../../src/extra -I.
-I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic
-march=native -O3 -pipe -fomit-frame-pointer -c CommandLineArgs.c -o
CommandLineArgs.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I../../src/extra -I.
-I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic
-march=native -O3 -pipe -fomit-frame-pointer -c Rdynload.c -o Rdynload.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I../../src/extra -I.
-I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic
-march=native -O3 -pipe -fomit-frame-pointer -c Renviron.c -o Renviron.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I../../src/extra -I.
-I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic
-march=native -O3 -pipe -fomit-frame-pointer -c RNG.c -o RNG.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I../../src/extra -I.
-I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic
-march=native -O3 -pipe -fomit-frame-pointer -c agrep.c -o agrep.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I../../src/extra -I.
-I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic
-march=native -O3 -pipe -fomit-frame-pointer -c apply.c -o apply.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I../../src/extra -I.
-I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic
-march=native -O3 -pipe -fomit-frame-pointer -c arithmetic.c -o arithmetic.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I../../src/extra -I.
-I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic
-march=native -O3 -pipe -fomit-frame-pointer -c array.c -o array.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I../../src/extra -I.
-I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic
-march=native -O3 -pipe -fomit-frame-pointer -c attrib.c -o attrib.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I../../src/extra -I.
-I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic
-march=native -O3 -pipe -fomit-frame-pointer -c base.c -o base.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I../../src/extra -I.
-I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic
-march=native -O3 -pipe -fomit-frame-pointer -c bind.c -o bind.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I../../src/extra -I.
-I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic
-march=native -O3 -pipe -fomit-frame-pointer -c builtin.c -o builtin.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I../../src/extra -I.
-I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic
-march=native -O3 -pipe -fomit-frame-pointer -c character.c -o character.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I../../src/extra -I.
-I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic
-march=native -O3 -pipe -fomit-frame-pointer -c coerce.c -o coerce.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I../../src/extra -I.
-I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic
-march=native -O3 -pipe -fomit-frame-pointer -c colors.c -o colors.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I../../src/extra -I.
-I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic
-march=native -O3 -pipe -fomit-frame-pointer -c complex.c -o complex.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I../../src/extra -I.
-I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic
-march=native -O3 -pipe -fomit-frame-pointer -c connections.c -o connections.o
x86_64-alpine-linux-uclibc-gcc -std=gnu99 -I../../src/extra -I.
-I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic
-march=native -O3 -pipe -fomit-frame-pointer -c context.c -o context.o
connections.c: In function 'Rconn_fgetc':
connections.c:3184:11: error: expected identifier before '(' token
connections.c:3186:15: error: expected identifier before '(' token
make[3]: *** [connections.o] Error 1
make[3]: *** Waiting for unfinished jobs....
make[3]: Leaving directory
`/dev/shm/portage/dev-lang/R-2.15.1/work/R-2.15.1/src/main'
make[2]: *** [R] Error 2
make[2]: Leaving directory
`/dev/shm/portage/dev-lang/R-2.15.1/work/R-2.15.1/src/main'
make[1]: *** [R] Error 1
make[1]: Leaving directory
`/dev/shm/portage/dev-lang/R-2.15.1/work/R-2.15.1/src'
make: *** [R] Error 1
[31;01m* ERROR: dev-lang/R-2.15.1 failed (compile phase):
[31;01m* emake failed
[31;01m*
[31;01m* If you need support, post the output of `emerge --info
'=dev-lang/R-2.15.1'`,
[31;01m* the complete build log and the output of `emerge -pqv
'=dev-lang/R-2.15.1'`.
[31;01m* The complete build log is located at
'/dev/shm/portage/build/dev-lang/R-2.15.1:20120811-161105.log'.
[31;01m* For convenience, a symlink to the build log is located at
'/dev/shm/portage/dev-lang/R-2.15.1/temp/build.log'.
[31;01m* The ebuild environment file is located at
'/dev/shm/portage/dev-lang/R-2.15.1/temp/environment'.
[31;01m* Working directory:
'/dev/shm/portage/dev-lang/R-2.15.1/work/R-2.15.1'
[31;01m* S: '/dev/shm/portage/dev-lang/R-2.15.1/work/R-2.15.1'
-------------- next part --------------
Fix ocasional failure with parallel install (bug #322965)
Patch by Sebastien Fabbro
https://bugs.r-project.org/bugzilla3/show_bug.cgi?id=14505
--- src/include/Makefile.in.orig 2010-06-15 18:18:54.000000000 +0000
+++ src/include/Makefile.in 2010-06-15 18:19:48.000000000 +0000
@@ -81,7 +81,7 @@
Rmath.h0: $(srcdir)/Rmath.h0.in $(top_builddir)/config.status
@cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@
-install: installdirs install-intl- at USE_INCLUDED_LIBINTL@
+install: $(OBJ_HEADERS) installdirs install-intl- at USE_INCLUDED_LIBINTL@
@for d in $(SUBDIRS); do \
(cd $${d} && $(MAKE) $@) || exit 1; \
done
-------------- next part --------------
Respect ldflags on rscript
Patch by Sebastien Fabbro
https://bugs.r-project.org/bugzilla3/show_bug.cgi?id=14506
--- src/unix/Makefile.in.orig 2010-12-22 16:58:19.000000000 +0000
+++ src/unix/Makefile.in 2010-12-22 16:54:16.000000000 +0000
@@ -66,7 +66,7 @@
## we need to build at install time to capture the correct 'rhome'
install-Rscript:
- $(CC) $(ALL_CPPFLAGS) $(ALL_CFLAGS) -DR_HOME='"$(rhome)"' -o
Rscript \
+ $(CC) $(ALL_CPPFLAGS) $(ALL_CFLAGS) $(LDFLAGS)
-DR_HOME='"$(rhome)"' -o Rscript \
$(srcdir)/Rscript.c
@$(MKINSTALLDIRS) "$(DESTDIR)$(Rexecbindir)"
@$(INSTALL_PROGRAM) Rscript "$(DESTDIR)$(Rexecbindir)/Rscript"
-------------- next part --------------
Update for zlib header changes
https://bugs.gentoo.org/show_bug.cgi?id=383431
--- src/main/unzip.h.orig 2011-09-24 19:35:53.000000000 -0700
+++ src/main/unzip.h 2011-09-24 19:37:06.000000000 -0700
@@ -58,6 +58,10 @@
#define ZLIB_FILEFUNC_SEEK_END (2)
#define ZLIB_FILEFUNC_SEEK_SET (0)
+#ifndef OF
+#define OF(x) x
+#endif
+
#define ZLIB_FILEFUNC_MODE_READ (1)
#define ZLIB_FILEFUNC_MODE_WRITE (2)
#define ZLIB_FILEFUNC_MODE_READWRITEFILTER (3)
-------------- next part --------------
Add a --with-libtiff to avoid broken implicit dependencies
Patch by Sebastien Fabbro
--- configure.ac.orig 2012-01-02 17:01:24.000000000 +0000
+++ configure.ac 2012-01-02 17:04:21.000000000 +0000
@@ -396,6 +396,10 @@
[AS_HELP_STRING([--with-jpeglib],[use jpeglib library (if available)
@<:@yes@:>@])],
[R_ARG_USE(jpeglib)],
[use_jpeglib=yes])
+AC_ARG_WITH([libtiff],
+[AS_HELP_STRING([--with-libtiff],[use libtiff library (if available)
@<:@yes@:>@])],
+[R_ARG_USE(libtiff)],
+[use_libtiff=yes])
AC_ARG_WITH([system-zlib],
[AS_HELP_STRING([--with-system-zlib],[use system zlib library (if available)
@<:@no@:>@])],
[R_ARG_USE_SYSTEM(zlib)],
--- m4/R.m4.orig 2012-01-02 17:05:22.000000000 +0000
+++ m4/R.m4 2012-01-02 17:08:08.000000000 +0000
@@ -2005,16 +2005,18 @@
[Define if you have the PNG headers and libraries.])
fi
fi
-AC_CHECK_HEADERS(tiffio.h)
-# may need to resolve jpeg routines
-AC_CHECK_LIB(tiff, TIFFOpen, [have_tiff=yes], [have_tiff=no], [${BITMAP_LIBS}])
-if test "x${ac_cv_header_tiffio_h}" = xyes ; then
- if test "x${have_tiff}" = xyes; then
- AC_DEFINE(HAVE_TIFF, 1, [Define this if libtiff is available.])
- BITMAP_LIBS="-ltiff ${BITMAP_LIBS}"
- else
- have_tiff=no
- fi
+if test "${use_libtiff}" = yes; then
+ AC_CHECK_HEADERS(tiffio.h)
+ # may need to resolve jpeg routines
+ AC_CHECK_LIB(tiff, TIFFOpen, [have_tiff=yes], [have_tiff=no],
[${BITMAP_LIBS}])
+ if test "x${ac_cv_header_tiffio_h}" = xyes ; then
+ if test "x${have_tiff}" = xyes; then
+ AC_DEFINE(HAVE_TIFF, 1, [Define this if libtiff is available.])
+ BITMAP_LIBS="-ltiff ${BITMAP_LIBS}"
+ else
+ have_tiff=no
+ fi
+ fi
fi
AC_SUBST(BITMAP_LIBS)
])# R_BITMAPS
-------------- next part --------------
Link with libm to fix unresolved symbols when linked with as-needed
and add a soname to the standalone math library
Patch by Sebastien Fabbro
--- src/nmath/standalone/Makefile.in.orig 2010-03-17 14:43:22.000000000 +0000
+++ src/nmath/standalone/Makefile.in 2012-01-02 17:40:13.000000000 +0000
@@ -64,7 +64,8 @@
Rexeclibdir_LTLIBRARIES = $(libRmath_la)
libRmath_la_SOURCES = $(SOURCES)
libRmath_la_OBJECTS = $(OBJECTS:.o=.lo)
-libRmath_la_LDFLAGS +libRmath_la_LDFLAGS = -Wl,-soname=libRmath.so
+libRmath_la_LIBADD = $(LIBM)
CLEANFILES = Makedeps *.d *.o *.lo test $(SOURCES)
DISTCLEANFILES = Makefile $(Rexeclibdir_LIBRARIES) $(Rexeclibdir_LTLIBRARIES)
@@ -116,7 +117,7 @@
$(RANLIB) $@
$(libRmath_la): $(libRmath_la_OBJECTS)
- $(DYLIB_LINK) -o $@ $(libRmath_la_LDFLAGS) $(libRmath_la_OBJECTS)
+ $(DYLIB_LINK) $(libRmath_la_LDFLAGS) $(libRmath_la_OBJECTS)
$(libRmath_la_LIBADD) -o $@
test: $(srcdir)/test.c
$(CC) -o $@ $(ALL_CPPFLAGS) $(ALL_CFLAGS) $(srcdir)/test.c \