search for: mva

I am currently running Slakware V3.4 with g77 and R is a 0.62 snapshot of the 27th of May. There appear to be linking problems with the libraries. The error output from mva and eda can be found below. My own libraries also have similar problems. Errors when compiling mva: 116 /usr/local/src/R/src/library #R INSTALL mva Warning: package `-html' does not exist Warning: package `-latex' does not exist Installing package `mva' ... libs ld -o mva.so dblcen...

I wanted to use the dist() function from the mva library in my own library, so I put require(mva) in my files. When my library loads, a message about "Autoloading ... mva" appears. But when I call dist() now within my functions the message Error in .C("dist", as.double(x), nrow(x), ncol(x), double(len), as.integer(method)) :...

I am using rw0613b with djtools on Win95. No problem with makefiles building fortran and C dll's, plus can build R.exe with the supplied libraries (including mva). Why then do I get the following error when I try to building an existing library separately, eg... (/R-0.61.3/src/gnuwin32)$ make -f MakePkg -C ../library/mva PKG=mva make.exe: Entering directory `c:/R-0.61.3/src/library/mva' make.exe: MakePkg: No such file or directory (ENOENT) make.exe: *...

Hi All: Package TSERIES is stated to depend on MVA. However, there is no MVA package to be found under the list of package sources. Best wishes, ANDREW tseries: Package for time series analysis Package for time series analysis with emphasis on non-linear and non-stationary modelling Version: 0.7-6 Depends: ts, mva, quadprog Date: 2...

Hello, I am using the following code to plot an MVA plot. library(affy) library(Biobase) library(limma) library(gcrma) pd<-read.phenoData("Clk.targets.2.txt",header=TRUE, row.names=1,as.is=TRUE,sep="\t") Data <- ReadAffy(filenames=pData(pd)$FileName,phenoData=pd) Print(Data) eset <...

Dear List, although the library() command tells me that the pcakage "mva" is installed on my machine, I cannot use its functions or get help() about them. And, strange enough, I never installed the package manually. Has it become a part of R-base? I can't find the package among the package sources on CRAN, so I can't (re)install it manually. I'm using...

...gling for the single letter R yields R-home page as the firt hit, which is extremly nice. By clicking on the figure you get the code of the "Winner of the R Homepage graphics competition 2004." By copy/pasting in your R console it doesn't work because it is impossible to install the mva package. This is my point. As documented in ONEWS the reason is simple: since R 1.9.0 the package mva as been merged into the package stats. My suggestion is just to change the begining of the code as follows to neutralize the requirement for the mva package: ---- ### Code by Eric Lecoutre, Uni...

Full_Name: Laurent Gautier Version: 1.3.0-patched OS: IRIX 6.5 Submission from: (NULL) (130.225.67.199) Hello, The function La.eigen, called by cmdscale in the package mva behaves an unexplicable way (for me). The following lines show what happened. I tried the very same on linux, and it worked fine. >a <- matrix(c(1,2,3,2),3,3) >a [,1] [,2] [,3] [1,] 1 2 3 [2,] 2 1 2 [3,] 3 2 1 >library(mva) >cmdscale(a) Error in L...

I shouldn't try to do this on Monday morning. Can anyone suggest why the make for R 0.63 is failing for me under Solaris (SunOS 5.6). Paul Gilbert ... creating src/scripts/html2dos creating tests/Makefile creating tests/Examples/Makefile creating src/include/Platform.h R is now configured for sparc-sun-solaris2.6 Source directory: . Installation directory: /usr/local C

Not too hard to fix, the following buglet (new in 1.3.0), but I'm about to leave for one week (of vacation).. Here is an example (for Linux) : lynne{sfs}214> cd /tmp lynne{sfs}215> mkdir blue lynne{sfs}216> cd blue /tmp/blue lynne{sfs}217> echo 'data(package = "mva")'|R-1.3.0 --vanilla R : Copyright 2001, The R Development Core Team Version 1.3.0 (2001-06-22) R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type `license()' or `licence()' for distribution detai...

...analysis. I thought this method can be very useful for me to find relationships between several variables (which I know there is, only don't know which variables exactly and what kind of relation), so as a structure detection method. Now, I'm experimenting with the function prcomp from the mva package. In my source code below, I of course expect one of the column to be useless (I provided one duplicate column). I know both avg.EDGE.etc and avg.DEGREE have a relation with sum.delivery.penalty. E.g. the bigger avg.DEGREE, the smaller sum.delivery.penalty. My question is about the output o...

Dear R Team, Some minor typos in help pages for package:mva Thank you. Rashid Nassar 1. help(kmeans) Details: [k-means? not sure about this] v The data given by `x' is clustered by the k-Means algorithm. When this terminates, all cluster centres are at...

...he dataset, in a manner similar to the method applied in InfoViz. Say, what is the optimal step, if: Step 1 - What is the name of the package that i can install from CRAN for me to identify GA (Please consider) - I am using RGui 1.8.0 Step 2 - For the second doubt, i used the multiv, mva (EDA- packages) - I use RGui 1.8.0 because i couldn't find multiv, mva Or i'm not sure of getting it from RGui 2.3.0 (Please Consider) I have tried to read up on the 'R-search for Step-1 but i couldn't find the appropriate package. Can anyone point me in the right direction?...

kalish at psy.uwa.edu.au wrote: > > I'm a newbie at R, and can't get libraries to really work. > I did this: > > library(help = mva) > cancor Canonical Correlations > cmdscale Classical (Metric) Multidimensional Scaling > dist Distance Matrix Computation > hclust Hierarchical Clustering > kmeans K-Means Clustering > prcom...

...h prcomp() when n << p, which boils down to a problem with svd() when n << p, here is a patch to prcomp() which substitutes La.svd() instead of svd(). -Greg (This is really a feature enhancement, but submitted to R-bugs to make sure it doesn't get lost. ) *** R-1.6.0/src/library/mva/R/prcomp.R Mon Aug 13 17:41:50 2001 --- R-1.6.0-GRW//src/library/mva/R/prcomp.R Tue Oct 29 11:57:23 2002 *************** *** 1,18 **** prcomp <- function(x, retx = TRUE, center = TRUE, scale. = FALSE, ! tol = NULL) { x <- as.matrix(x) x <- scale(x, cen...

Peter, As I understand your Q. You probably have data that is similar to each other like stock Prices for all RHS variable. In that case the difference between corr and cov is not significant; however, if your RHS contains totally dissimilar variables it matters a great deal. If x1 income, x2 job type, x3 Education level, etc..., then taking cov of these variables would not be desireable

...tion violation (core dumped)" upon q() in this and R-0.90.1 even though it seemed to do calculations that agree with an equivalent package compiled and run under S+3.4. So I tried to mimic base-Ex.R, viz. (gdb) run Starting program: /usr/local/R/R-release/bin/R.X11 [snip banner] > library(mva) > q() Save workspace image? [y/n/c]: n Program received signal SIGSEGV, Segmentation fault. 0xfefe333c in __do_global_dtors_aux () from /usr/local/R/R-release/library/mva/libs/mva.so (gdb) ---------- FWIW, upon restarting R, loading mva, and setting a breakpoint at __do_global_dtors_aux,...

...se of XsubscribeX (w/o "X") in text. Martin Maechler; list manager} I grabbed the nov 5 devel tarball and built the system. I had to make hand changes to "readline" stuff. I also had to change build-help mod to +x. Now library(xxx) is not working. I had to change eda and mva zzz.R files by hand so that shared lib ext was set to ".sl" not ".so". Still I can't get it to work. R : Copyright 1998, The R Development Core Team Version 0.63.0 Unstable (November 5, 1998) .... > library(mva) Error: dynamic library `mva.sl' not found but if I d...

...s' package, once as `tools' and once as `Tools'. This behavior is the same with all packages and it occurs also in R 1.6.2. > library(tools) > search() [1] ".GlobalEnv" "package:tools" "package:methods" "package:ctest" "package:mva" [6] "package:modreg" "package:nls" "package:ts" "Autoloads" "package:base" > library(Tools) Attaching package 'Tools': The following object(s) are masked from package:tools : .checkDemoIndex .checkVig...

library(mva) data(USArrests) hc <- hclust(dist(USArrests), "ave") plot(hc) # OK dump(c("hc"), "tst") rm(hc) source("tst") plot(hc) # Error in plot.hclust(hc) : invalid dendrogram input The same problem occurs...