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2017 Sep 25
3
rkward_0.6.5-1~stretchcran.0_amd64.deb missing
...n/linux/debian/stretch-cran34/. I can see a new Rkward package for the i386 architecture dated September 20, but I do not see the version for the amd64 architecture.
Thank you very much for your help.
Best regards. Griera.
On Wed, 20 Sep 2017 17:16:35 +0200
Johannes Ranke <johannes.ranke at jrwb.de> wrote:
> Hello,
>
> Am Mittwoch, 20. September 2017, 15:43:32 CEST schrieb Griera:
> > Hi:
> >
> > I have tried to upgrade from version 3.4.0 to 3.4.1 in a Debian Stretch
> > following the instructions of the web page:
> >
> > https://cran.r...
2017 Sep 26
2
rkward_0.6.5-1~stretchcran.0_amd64.deb missing
...hcran.0_amd64.deb rkward-data_0.6.5-1~stretchcran.0_all.deb
By default, apt-get installed the Debian repository version (rkward 0.6.5-1+b1 0.6.5-1+b1).
Thanks for your contributions to the R-Debian project!
Regards. Griera.
On Mon, 25 Sep 2017 11:41:54 +0200
Johannes Ranke <johannes.ranke at jrwb.de> wrote:
> Hello Griera,
>
> sorry, I forgot an "svn add", so the package got lost on the way.
>
> It is on chem now, and will migrate to CRAN shortly.
>
> Johannes
>
> Am Montag, 25. September 2017, 10:57:37 CEST schrieb Griera:
> > Hello Johann...
2017 Sep 20
3
rkward_0.6.5-1~stretchcran.0_amd64.deb missing
Hi:
I have tried to upgrade from version 3.4.0 to 3.4.1 in a Debian Stretch following the instructions of the web page:
https://cran.r-project.org/bin/linux/debian/
but after updating, Rkward does not work (Error in RK: Graphics API version mismatch). Analyzing the problem, I notice that the Rkward package is not available in the amd64 version (yes in the i386 version), for example here:
2019 Jan 29
3
Update RKWard to> = 0.7.0
Hello:
I just upgraded my Debian Stretch to version 3.5 by following the
instructions here:
https://cran.r-project.org/bin/linux/debian/stretch-cran34/
Then I have updated as root the R from inside with:
update.packages(.libPaths()[1], ask = F, checkBuilt=TRUE, dependencies = F,
repos = "http://mirror.ibcp.fr/pub/CRAN/")
When finalizing the update of the R, I execute
RKWard and I get
2017 Sep 25
0
rkward_0.6.5-1~stretchcran.0_amd64.deb missing
...ward package for the i386 architecture dated September 20, but I do
> not see the version for the amd64 architecture.
>
> Thank you very much for your help.
>
> Best regards. Griera.
>
>
> On Wed, 20 Sep 2017 17:16:35 +0200
>
> Johannes Ranke <johannes.ranke at jrwb.de> wrote:
> > Hello,
> >
> > Am Mittwoch, 20. September 2017, 15:43:32 CEST schrieb Griera:
> > > Hi:
> > >
> > > I have tried to upgrade from version 3.4.0 to 3.4.1 in a Debian Stretch
> > >
> > > following the instructions of t...
2019 Jan 21
2
r-api-3 with R 3.5.2. on Stretch: is there a workaround?
Now that I am at least mapping the right repository to my Debian version (doh!) I have another question. In the installation page at https://cran.r-project.org/bin/linux/debian/#debian-stretch-stable there is the line:
"Please note that R packages from the Debian stretch distribution are not compatible with R 3.5.x, as it provides r-api-3.5, while the stretch packages depend on
2016 Nov 08
0
proplems installing R 2.5 on Ubuntu 14.04
----- Am 8. Nov 2016 um 16:22 schrieb Johannes Ranke johannes.ranke at jrwb.de:
> Hallo Bernd,
>
> das heisst die gleiche Fehlermeldung bei "configure"?
>
> Gru?,
>
> Johannes
>
> Am Dienstag, 8. November 2016, 15:45:15 schrieb Lentes, Bernd:
>> ----- Am 8. Nov 2016 um 15:26 schrieb Johannes Ranke johannes.ranke at jrwb.de:
&...
2017 Sep 20
0
rkward_0.6.5-1~stretchcran.0_amd64.deb missing
...rsion), for example here:
>
> https://cran.r-project.org/bin/linux/debian/stretch-cran34/
Thanks for reporting. The build for amd64 failed, because somehow apt-get
source does not see the source package of rkward in the repository any more.
I had to adapt my build script
https://cgit.jrwb.de/r-backports/commit/?id=56157ad9495765d9
The amd64 deb is on its way to CRAN, I think it should be there within a day
or so. If impatient, use
deb http://chem.uft.uni-bremen.de/ranke/r-cran jessie-cran34/
for the moment.
Cheers,
Johannes
>
> It is not necessary? Can anyone help m...
2016 Nov 08
2
proplems installing R 2.5 on Ubuntu 14.04
----- Am 8. Nov 2016 um 15:26 schrieb Johannes Ranke johannes.ranke at jrwb.de:
> Hi
>
> try
>
> apt-get build-dep r-base
>
> this installs the headers required for building current R, which probably also
> covers older versions - at least it will give you X11 headers.
>
> Good luck,
>
> Johannes
>
>
Hi Johannes,
i tried t...
2017 Jul 18
1
Backports of R 3.4.1 to Debian delayed
...l iterations with spurious segfaults, I will
not upload it as I am not sure if it could be corrupted in some way.
I hope to be able to upload a clean backport of R 3.4.1 during the rest of the
week or at the weekend.
Kind regards,
Johannes
--
Johannes Ranke
Wissenschaftlicher Berater
https://jrwb.de/contact
2018 Jan 04
0
Debian r-base package
...a mailing list r-sig-debian for exactly this type of
> question. I am CC my reply there, please keep follow-up on the list rather
> than my inbox.
>
> Best, Dirk
>
> | Thank you very much
> | Best regards
> | Morgan
--
Johannes Ranke
Wissenschaftlicher Berater
https://jrwb.de/contact
2018 Mar 17
1
Hash Sum mismatch @ uni-muenster mirror
Hello everybody,
for serveral hours we had "Had Sum mismatch" errors for the following
packages from the mirror of U of M?nster -- r-project works fine as a
temp. fallback:
r-cran-cluster 2.0.6-2~stretchcran.0
r-cran-foreign 0.8.69-1~stretchcran.0
r-cran-kernsmooth 2.23-15-3~stretchcran.0
r-cran-class 7.3-14-2~stretchcran.0
r-cran-nnet 7.3-12-2~stretchcran.0
r-cran-spatial
2019 Jan 21
0
r-api-3 with R 3.5.2. on Stretch: is there a workaround?
...9;m guessing that had I been able to install the debs the
> installation would have been much faster.
>
> Is there a workaround or am I right that installing within R _is_ the
> workaround?
>
> TIA (again),
>
> Chris
--
Johannes Ranke
Wissenschaftlicher Berater
https://jrwb.de/contact
2019 Jan 29
0
Update RKWard to> = 0.7.0
...and gratitude for the R Debian repositories. Thank you. Griera
>
> _______________________________________________
> R-SIG-Debian mailing list
> R-SIG-Debian at r-project.org
> https://stat.ethz.ch/mailman/listinfo/r-sig-debian
--
Johannes Ranke
Wissenschaftlicher Berater
https://jrwb.de/contact
2020 Oct 28
0
nlme: New variance function structure varConstProp
...sideration.
Johannes Ranke
[1] https://bugs.r-project.org/bugzilla/show_bug.cgi?id=17954
[2] https://doi.org/10.1093/clinchem/24.11.1895
[3] https://doi.org/10.1016/j.aca.2003.12.047
[4] https://doi.org/10.1016/j.ejps.2017.05.021
[5] https://doi.org/10.3390/environments6120124
[6] https://pkgdown.jrwb.de/mkin/dev/reference/sigma_twocomp.html
[7] https://doi.org/10.1201/b17203
2016 Nov 08
0
proplems installing R 2.5 on Ubuntu 14.04
On Tue, Nov 8, 2016 at 10:45 AM, Lentes, Bernd <
bernd.lentes at helmholtz-muenchen.de> wrote:
>
>
> ----- Am 8. Nov 2016 um 15:26 schrieb Johannes Ranke
> johannes.ranke at jrwb.de:
>
> > Hi
> >
> > try
> >
> > apt-get build-dep r-base
> >
> > this installs the headers required for building current R, which
> probably also
> > covers older versions - at least it will give you X11 headers.
> >
> > Good luck,...
2018 Jan 04
3
Debian r-base package
Morgan,
On 4 January 2018 at 15:05, Morgan Morgan wrote:
| Hi Dirk,
|
| On the website:
| https://packages.debian.org/jessie-backports/r-base
^^^^^^^^^^^^^^^^
|
| I see that you are the maintainer.
... of r-base in Debian, ie unstable / testing / stable. I have nothing to do
with the backport. Talk to its maintainer.
| I was wondering if you know when the
2019 Jan 20
2
Still hitting odd problems trying to install R 3.5.2 on Debian amd64 machine
...tmp/apt-key-gpghome.qnQrK8dgus/gpg.1.sh --keyserver keys.gnupg.net --recv-key E19F5F87128899B192B1A2C2AD5F960A256A04AF
key AD5F960A256A04AF:
4 signatures not checked due to missing keys
gpg: key AD5F960A256A04AF: public key "Johannes Ranke (Wissenschaftlicher Berater) < johannes.ranke at jrwb.de >" imported
gpg: Total number processed: 1
gpg: imported: 1
root at DebianAdvent:/etc/apt#
So now I try to install R base using synaptic and I get a message like "Warning: you are about to install software that cannot be ..." (paraphrasing)
So I try this:
root at Debian...
2017 Oct 21
1
Problem when installing lme4 under Debian stretch
...gt; |
> | [[alternative HTML version deleted]]
> |
> | _______________________________________________
> | R-SIG-Debian mailing list
> | R-SIG-Debian at r-project.org
> | https://stat.ethz.ch/mailman/listinfo/r-sig-debian
--
Johannes Ranke
Wissenschaftlicher Berater
https://jrwb.de/contact
2019 Feb 21
2
Most recent version R for IBM Power8 Ubuntu environment
What is he most recent version of R known to run reliably in an environment of IBM HPC cluster Power8 systems, Ubuntu 16.04.1 operating environment with gpfs as the cluster file-system? It would seem from 'apt' checking to be R-3.2.3; however, that one is rather old and does not support a sufficient number of R packages that are needed for current university research projects. R-3.5.1 has