search for: chisqsim

....value=TRUE) By freeze, I mean, the function call never returns (running > 10 hours so far), the process is unresponsive to SIGINT (but I call kill it with TERM), and the process still consumes cycles on the CPU. Browsing through the code, it seems to be getting stuck on the C call to "chisqsim" . Browse[1]> debug: tmp <- .C("chisqsim", as.integer(nr), as.integer(nc), as.integer(sr), as.integer(sc), as.integer(n), as.integer(B), as.double(E), integer(nr * nc), double(n + 1), integer(nc), results = double(B), PACKAGE = "ctest") Browse[1]>...

...some lines which appear normal, the following error messages (for the GNU make): ---------------------------------------------------------------------------- ---- ... make[3]: Entering directory `/home/ppp/paradis/R/R-1.0.1/src/appl' cr libappl.a Rsock.o S_compat.o approx.o bakslv.o binning.o chisqsim.o chull.o c poly.o cumsum.o distance.o fft.o fmin.o fortran.o lbfgsb.o loglin.o lowess.o mac har.o massdist.o pretty.o pythag.o rowsum.o sock.o splines.o stem.o strsignif.o tabulate.o uncmin.o zeroin.o ch2inv.o chol.o dpbfa.o dpbsl.o dpoco.o dpodi.o dpo fa.o dposl.o dqrdc.o dqrdc2.o dqrls.o dqrsl.o...

...l/SUNWspro/prod/include -c stl.f -o stl.o f95 -PIC -O -I/mounts/devel/SUNWspro/prod/include -c portsrc.f -o portsrc.o cc -xtarget=generic64 -G -L/mounts/devel/SUNWspro/lib/amd64 -L/usr/sfw/lib/amd64 -L/mounts/devel/GNU/repoz/readline43/lib/amd64 -o stats.so init.o kmeans.o ansari.o bandwidths.o chisqsim.o d2x2xk.o fexact.o kendall.o ks.o line.o smooth.o prho.o swilk.o ksmooth.o loessc.o isoreg.o Srunmed.o Trunmed.o dblcen.o distance.o hclust-utils.o nls.o HoltWinters.o PPsum.o arima.o burg.o filter.o mAR.o pacf.o starma.o port.o family.o bsplvd.o bvalue.o bvalus.o loessf.o ppr.o qsbart.o sb...

...lems but during 'make' I receive the following error-message: [......] g77 -mieee -g -O2 -c dtrco.f -o dtrco.o g77 -mieee -g -O2 -c dtrsl.f -o dtrsl.o g77 -mieee -g -O2 -c eigen.f -o eigen.o g77 -mieee -g -O2 -c lminfl.f -o lminfl.o ar cr libappl.a Rsock.o approx.o bakslv.o binning.o chisqsim.o chull.o cpoly.o cumsum.o distance.o fft.o fmin.o fortran.o lbfgsb.o loglin.o lowess.o machar.o maxcol.o massdist.o pretty.o rowsum.o sock.o splines.o stem.o strsignif.o tabulate.o uncmin.o zeroin.o ch2inv.o chol.o dpbfa.o dpbsl.o dpoco.o dpodi.o dpofa.o dposl.o dqrdc.o dqrdc2.o dqrls....

...mkdir -p -- ../../../library/ctest/man make[4]: Entre dans le r?pertoire `/usr/local/R-1.7.1/src/library/ctest/src' making ansari.d from ansari.c gcc: /usr/include/mysql: fichier d'entr?e d'?dition de liens n'est pas utilis? parce l'?dition de lien n'a pas ?t? faite making chisqsim.d from chisqsim.c gcc: /usr/include/mysql: fichier d'entr?e d'?dition de liens n'est pas utilis? parce l'?dition de lien n'a pas ?t? faite making d2x2xk.d from d2x2xk.c gcc: /usr/include/mysql: fichier d'entr?e d'?dition de liens n'est pas utilis? parce l'?diti...

...; CXX=g++3 CXXFLAGS="-m64" F77=g773 FFLAGS="-m64" LDFLAGS="-m64 -L/usr/local/packages/gcc-3.2/lib/sparcv9" ./configure --prefix=/usr/local/packages/R-1.5.1-64bit runs OK, however one of the tests (I assume it is a test anyway) fails thus gcc3 -G -o ctest.so ansari.o chisqsim.o d2x2xk.o fexact.o kendall.o ks.o prho.o swilk.o init.o -L/usr/lib/sparcv9 -L/usr/local/packages/gcc-3.2/lib/sparcv9 -L/usr/local/packages/gcc-3.2/lib/gcc-lib/sparc-sun-solaris2.8/3.2/sparcv9 -L/usr/local/packages/gcc-3.2/lib/gcc-lib/sparc-sun-solaris2.8/3.2 -L/usr/ccs/bin/sparcv9 -L/usr/ccs/bin...

...ing build failure: <...stuff omitted...> cc1: warning: changing search order for system directory "/usr/local/include" cc1: warning: as it has already been specified as a non-system directory gcc -bundle -flat_namespace -undefined suppress -L/usr/local/lib -o ctest.so ansari.o chisqsim.o d2x2xk.o fexact.o kendall.o ks.o prho.o swilk.o init.o -L/usr/local/lib -L/opt/local/lib/gcc-lib/powerpc-apple-darwin6.2/3.1 -L/opt/local/lib/gcc-lib/powerpc-apple-darwin6.2/3.1/../../.. -lreadline -ldl -lncurses -lm -lfrtbegin -lg2c -lSystem ../../../../library/ctest/libs/ctest.so is unchan...

...c/include' make[2]: Entering directory `/opt/local/R-1.0.0/src/appl' make[3]: Entering directory `/opt/local/R-1.0.0/src/appl' making Rsock.d from Rsock.c making S_compat.d from S_compat.c making approx.d from approx.c making bakslv.d from bakslv.c making binning.d from binning.c making chisqsim.d from chisqsim.c making chull.d from chull.c making cpoly.d from cpoly.c making cumsum.d from cumsum.c making distance.d from distance.c making fft.d from fft.c making fmin.d from fmin.c making fortran.d from fortran.c making lbfgsb.d from lbfgsb.c making loglin.d from loglin.c making lowess.d fro...

...tually, you do not want "external" symbols from elsewhere pulled into to the archive. c) one example - stats.so currently the command to make stats.so is: gcc -Wl,-bnoquiet -std=gnu99 -shared -Wl,-brtl -Wl,-G -Wl,-bexpall -Wl,-bnoentry -o stats.so init.o kmeans.o ansari.o bandwidth s.o chisqsim.o d2x2xk.o fexact.o kendall.o ks.o line.o smooth.o prho.o swilk.o ksmooth.o loessc.o monoSpl.o isoreg.o Srunmed.o d blcen.o distance.o hclust-utils.o nls.o rWishart.o HoltWinters.o PPsum.o arima.o burg.o filter.o mAR.o pacf.o starma.o port.o fa mily.o sbart.o approx.o loglin.o lowess.o massdist.o s...

On 2015-10-15 15:02, Prof Brian Ripley wrote: > On 15/10/2015 13:32, Michael Felt wrote: >> Hi. >> >> Just wanted to let you know I am getting close to packaging R for AIX in rephrase - would like to be active in keeping R binaries current for AIX. My interest in not in R per se (rather a colleague who has a project that uses R, so I hope to assist him, and others like him).

...directory `/home/mfa5/gilp/R-versions/R-devel/src/appl' make[3]: Entering directory `/home/mfa5/gilp/R-versions/R-devel/src/appl' making Rsock.d from Rsock.c making S_compat.d from S_compat.c making approx.d from approx.c making bakslv.d from bakslv.c making binning.d from binning.c making chisqsim.d from chisqsim.c making chull.d from chull.c making cpoly.d from cpoly.c making cumsum.d from cumsum.c making distance.d from distance.c making fft.d from fft.c making fmin.d from fmin.c making fortran.d from fortran.c making lbfgsb.d from lbfgsb.c making loglin.d from loglin.c making lowess.d fro...

...n it: ./configure --with-x=no --enable-R-shlib make The configure step is uneventful, the tail end of make follows. Does anyone have any experience with that? Thanks a lot in advance for any suggestions. gcc -std=gnu99 -shared -L/usr/local/lib -o stats.so init.o kmeans.o ansari.o bandwidths.o chisqsim.o d2x2xk.o fexact.o kendall.o ks.o line.o smooth.o prho.o swilk.o ksmooth.o loessc.o isoreg.o Srunmed.o Trunmed.o dblcen.o distance.o hclust-utils.o nls.o HoltWinters.o PPsum.o arima.o burg.o filter.o mAR.o pacf.o starma.o port.o family.o sbart.o approx.o loglin.o lowess.o massdist.o splines.o bspl...

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...y/base' gmake[3]: Entering directory `/soft/R/R-1.5.1/src/library/ctest' building package 'ctest' mkdir -p -- ../../../library/ctest/R mkdir -p -- ../../../library/ctest/man gmake[4]: Entering directory `/soft/R/R-1.5.1/src/library/ctest/src' making ansari.d from ansari.c making chisqsim.d from chisqsim.c making d2x2xk.d from d2x2xk.c making fexact.d from fexact.c making kendall.d from kendall.c making ks.d from ks.c making prho.d from prho.c making swilk.d from swilk.c making init.d from init.c gmake[5]: Entering directory `/soft/R/R-1.5.1/src/library/ctest/src' gmake[5]: `Mak...