thr3ads.net - R devel - dyn.load tcl/tk (PR#1774) [Jul 2002]

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joeckel@mpch-mainz.mpg.de

2002-Jul-11 19:15 UTC

dyn.load tcl/tk (PR#1774)

<<insert bug report here>>
------------------------------------------------------
Error:

R : Copyright 2002, The R Development Core Team
Version 1.5.1  (2002-06-17)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type `license()' or `licence()' for distribution details.

R is a collaborative project with many contributors.
Type `contributors()' for more information.

Type `demo()' for some demos, `help()' for on-line help, or
`help.start()' for a HTML browser interface to help.
Type `q()' to quit R.
> demo(tkttest,package="tcltk")

        demo(tkttest)
        ---- ~~~~~~~

Type  <Return>   to start : >
> require(tcltk) || stop("tcltk support is absent")Loading required package: tcltk
Error in dyn.load(x, as.logical(local), as.logical(now)) :
        unable to load shared library 
"/soft/R/v1.5.1/lib/R/library/tcltk/libs/tcltk.so":
  dlopen: /soft/R/v1.5.1/lib/R/library/tcltk/libs/tcltk.so: symbol 
"Tcl_GetDoubleFromObj" unresolved
Error in .C("delTcl", PACKAGE = "tcltk") :
        C/Fortran function name not in load table
Error in eval.with.vis(expr, envir, enclos) :
        tcltk support is absent>------------------------------------------------------
build:
tcsh
setenv CC /usr/bin/cc
setenv F77 /usr/bin/f77
setenv MAKE /soft/bin/gmake
setenv CPP /usr/bin/cpp
setenv CXX /usr/bin/cxx

setenv TCLTK_LIBS "-L/soft/tcl/v8.3.4/lib"
setenv TCLTK_CPPFLAGS "-I/soft/tcl/v8.3.4/include"

setenv LDFLAGS "-L/soft/readline/v4.2.1/lib"
setenv CFLAGS "-I/soft/readline/v4.2.1/include"
setenv CPPFLAGS "-I/soft/readline/v4.2.1/include"

#setenv CPPFLAGS
#setenv FFLAGS
#setenv CXXFLAGS
#setenv CXXCPP


./configure --prefix=/soft/R/v1.5.1 
--with-tcl-config=/soft/tcl/v8.3.4/lib/tclConfig.sh 
--with-tk-config=/soft/tcl/v8.3.4/lib/tkConfig.sh >&! config.out

gmake >&! gmake.out
gmake check >&! gmake_check.out
gmake pdf >&! gmake_pdf.out
gmake install  >&! gmake_install.out
gmake install-pdf  >&! gmake_install_pdf.out

------------------------------------------------------
config.out:
checking for a BSD-compatible install... tools/install-sh -c
checking whether build environment is sane... yes
checking whether /soft/bin/gmake sets ${MAKE}... yes
checking for working aclocal... found
checking for working autoconf... found
checking for working automake... found
checking for working autoheader... found
checking for working makeinfo... found
checking build system type... alphaev56-dec-osf5.1
checking host system type... alphaev56-dec-osf5.1
loading site script ./config.site
loading build specific script ./config.site
checking for pwd... /usr/bin/pwd
checking whether builddir is srcdir... yes
checking for gawk... no
checking for mawk... no
checking for nawk... nawk
checking whether ln -s works... yes
checking for ranlib... ranlib
checking for bison... bison -y
checking for ar... ar
checking for javac... /usr/bin/javac
checking for less... /soft/bin/less
checking for perl... /soft/perl/v5.6.0/bin/perl
checking whether perl version is at least 5.004... yes
checking for dvips... /soft/teTeX/bin/dvips
checking for tex... /soft/teTeX/bin/tex
checking for latex... /soft/teTeX/bin/latex
checking for makeindex... /soft/teTeX/bin/makeindex
checking for pdftex... /soft/teTeX/bin/pdftex
checking for pdflatex... /soft/teTeX/bin/pdflatex
checking for makeinfo... /soft/teTeX/bin/makeinfo
checking for unzip... /soft/archive/unzip-v5.32/unzip
checking for zip... /soft/archive/zip-v2.3/zip
checking for gcc... /usr/bin/cc
checking for C compiler default output... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU C compiler... no
checking whether /usr/bin/cc accepts -g... yes
checking for non-GNU ld... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... no
checking for /usr/bin/ld option to reload object files... -r
checking for BSD-compatible nm... /usr/bin/nm -B
checking how to recognise dependant libraries... pass_all
checking command to parse /usr/bin/nm -B output... ok
checking how to run the C preprocessor... /usr/bin/cpp
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... no
checking for unistd.h... yes
checking dlfcn.h usability... yes
checking dlfcn.h presence... yes
checking for dlfcn.h... yes
checking for ranlib... (cached) ranlib
checking for strip... strip
checking for objdir... .libs
checking for /usr/bin/cc option to produce PIC... none
checking if /usr/bin/cc static flag -non_shared works... yes
checking if /usr/bin/cc supports -c -o file.o... yes
checking if /usr/bin/cc supports -c -o file.lo... yes
checking whether the linker (/usr/bin/ld) supports shared libraries... yes
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... no
checking dynamic linker characteristics... osf5.1 ld.so
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
creating libtool
checking whether makeinfo version is at least 4... no
configure: WARNING: you cannot build info versions of the R manuals
checking for gcc... (cached) /usr/bin/cc
checking whether we are using the GNU C compiler... (cached) no
checking whether /usr/bin/cc accepts -g... (cached) yes
checking for /usr/bin/cc option to accept ANSI C... none needed
checking how to run the C preprocessor... /usr/bin/cpp
defining F77 to be /usr/bin/f77
checking whether we are using the GNU Fortran 77 compiler... no
checking whether /usr/bin/f77 accepts -g... yes
checking whether we are using the GNU C++ compiler... no
checking whether /usr/bin/cxx accepts -g... yes
checking how to run the C++ preprocessor... /usr/bin/cxx -E
checking for main in -lm... yes
checking for sin in -lm... yes
checking for main in -lncurses... no
checking for main in -ltermcap... yes
checking for dlopen in -ldl... no
checking for rl_callback_read_char in -lreadline... yes
checking for ANSI C header files... (cached) yes
checking whether time.h and sys/time.h may both be included... yes
checking for dirent.h that defines DIR... yes
checking for library containing opendir... none required
checking for sys/wait.h that is POSIX.1 compatible... yes
checking arpa/inet.h usability... yes
checking arpa/inet.h presence... yes
checking for arpa/inet.h... yes
checking dl.h usability... no
checking dl.h presence... no
checking for dl.h... no
checking for dlfcn.h... (cached) yes
checking elf.h usability... no
checking elf.h presence... no
checking for elf.h... no
checking fcntl.h usability... yes
checking fcntl.h presence... yes
checking for fcntl.h... yes
checking floatingpoint.h usability... no
checking floatingpoint.h presence... no
checking for floatingpoint.h... no
checking fpu_control.h usability... no
checking fpu_control.h presence... no
checking for fpu_control.h... no
checking grp.h usability... yes
checking grp.h presence... yes
checking for grp.h... yes
checking ieee754.h usability... no
checking ieee754.h presence... no
checking for ieee754.h... no
checking ieeefp.h usability... no
checking ieeefp.h presence... no
checking for ieeefp.h... no
checking locale.h usability... yes
checking locale.h presence... yes
checking for locale.h... yes
checking netdb.h usability... yes
checking netdb.h presence... yes
checking for netdb.h... yes
checking netinet/in.h usability... yes
checking netinet/in.h presence... yes
checking for netinet/in.h... yes
checking pwd.h usability... yes
checking pwd.h presence... yes
checking for pwd.h... yes
checking readline/history.h usability... yes
checking readline/history.h presence... yes
checking for readline/history.h... yes
checking readline/readline.h usability... yes
checking readline/readline.h presence... yes
checking for readline/readline.h... yes
checking rpc/rpc.h usability... yes
checking rpc/rpc.h presence... yes
checking for rpc/rpc.h... yes
checking for strings.h... (cached) yes
checking sys/param.h usability... yes
checking sys/param.h presence... yes
checking for sys/param.h... yes
checking sys/select.h usability... yes
checking sys/select.h presence... yes
checking for sys/select.h... yes
checking sys/socket.h usability... yes
checking sys/socket.h presence... yes
checking for sys/socket.h... yes
checking for sys/stat.h... (cached) yes
checking sys/time.h usability... yes
checking sys/time.h presence... yes
checking for sys/time.h... yes
checking sys/times.h usability... yes
checking sys/times.h presence... yes
checking for sys/times.h... yes
checking sys/utsname.h usability... yes
checking sys/utsname.h presence... yes
checking for sys/utsname.h... yes
checking for unistd.h... (cached) yes
checking errno.h usability... yes
checking errno.h presence... yes
checking for errno.h... yes
checking stdarg.h usability... yes
checking stdarg.h presence... yes
checking for stdarg.h... yes
checking for string.h... (cached) yes
checking whether setjmp.h is POSIX.1 compatible... no
checking for GNU C library with version >= 2... no
checking return type of signal handlers... void
checking for pid_t... yes
checking for size_t... yes
checking for blkcnt_t... no
checking for type of socket length... size_t *
checking whether byte ordering is bigendian... no
checking for an ANSI C-conforming const... yes
checking for int... yes
checking size of int... 4
checking for long... yes
checking size of long... 8
checking for long long... yes
checking size of long long... 8
checking for long double... yes
checking size of long double... 16
checking whether /usr/bin/cc accepts -M for generating dependencies... yes
checking whether /usr/bin/cc supports -c -o FILE.lo... yes
checking how to get verbose linking output from /usr/bin/f77... -v
checking for Fortran 77 libraries...  -L/soft/readline/v4.2.1/lib -lreadline 
-ltermcap -lm -lUfor -lfor -lFutil -lots -lm_c32 -lmld -lexc
checking for dummy main to link with Fortran 77 libraries... none
checking for Fortran 77 name-mangling scheme... lower case, underscore, no 
extra underscore
checking whether /usr/bin/f77 and /usr/bin/cc agree on int and double... yes
checking whether /usr/bin/f77 and /usr/bin/cc agree on double complex... yes
checking whether /usr/bin/f77 supports -c -o FILE.lo... yes
checking whether /usr/bin/cxx accepts -M for generating dependencies... yes
checking whether /usr/bin/cxx supports -c -o FILE.lo... yes
checking whether /usr/bin/cc accepts -std1... yes
checking whether /usr/bin/cc accepts -ieee_with_inexact... yes
checking whether /usr/bin/f77 accepts -fpe3... yes
checking whether /usr/bin/cxx accepts -ieee... yes
checking for xmkmf... /usr/bin/X11/xmkmf
configure: WARNING: I could not determine SHLIB_CXXLDFLAGS
checking for working alloca.h... yes
checking for alloca... yes
checking for access... yes
checking for chdir... yes
checking for expm1... yes
checking for fcntl... yes
checking for finite... yes
checking for ftruncate... yes
checking for getcwd... yes
checking for getgrgid... yes
checking for getpwuid... yes
checking for getuid... yes
checking for hypot... yes
checking for isascii... yes
checking for isnan... yes
checking for log1p... yes
checking for matherr... no
checking for mkfifo... yes
checking for popen... yes
checking for putenv... yes
checking for rint... yes
checking for setenv... yes
checking for strcoll... yes
checking for stat... yes
checking for strptime... yes
checking for system... yes
checking for times... yes
checking for unsetenv... yes
checking for acosh... yes
checking for asinh... yes
checking for atanh... yes
checking for snprintf... yes
checking for strdup... yes
checking for strncasecmp... yes
checking for vsnprintf... yes
checking whether acosh is declared... yes
checking whether asinh is declared... yes
checking whether atanh is declared... yes
checking whether snprintf is declared... yes
checking whether strdup is declared... yes
checking whether strncasecmp is declared... yes
checking whether vsnprintf is declared... yes
checking for library containing connect... none required
checking for library containing gethostbyname... none required
checking for library containing xdr_string... none required
checking for __setfpucw... no
checking for working calloc... no
checking for working finite... no
checking for working log... no
checking for working strptime... yes
checking for sgemm_... no
checking for ATL_xerbla in -latlas... no
checking for sgemm_ in -lblas... no
checking for acosp in -lsunmath... no
checking for sgemm_ in -lblas... (cached) no
checking for sgemm_ in -lblas... (cached) no
checking for X... libraries , headers 
checking for gethostbyname... yes
checking for connect... yes
checking for remove... yes
checking for shmat... yes
checking for IceConnectionNumber in -lICE... yes
checking for /soft/tcl/v8.3.4/lib/tclConfig.sh... 
/soft/tcl/v8.3.4/lib/tclConfig.sh
checking for /soft/tcl/v8.3.4/lib/tkConfig.sh... 
/soft/tcl/v8.3.4/lib/tkConfig.sh
checking for finite... (cached) yes
checking for isnan... (cached) yes
checking whether isfinite is declared... no
checking whether isnan is declared... yes
checking whether you have IEEE 754 floating-point arithmetic... yes
checking for BSD networking... yes
checking if jpeglib version >= 6b... no
checking for main in -lz... yes
checking if libpng version >= 1.0.5... no
checking for XDR support... yes
checking for gzeof in -lz... no
checking whether zlib support needs to be compiled... yes
checking mmap support for zlib... yes
checking for BZ2_bzlibVersion in -lbz2... no
checking whether leap seconds are treated according to POSIX... yes
checking for setitimer... yes
checking for lpr... lpr
checking for paperconf... false
configure: creating ./config.status
config.status: creating Makeconf
config.status: creating Makefile
config.status: creating afm/Makefile
config.status: creating doc/Makefile
config.status: creating doc/html/Makefile
config.status: creating doc/html/search/Makefile
config.status: creating doc/manual/Makefile
config.status: creating etc/Makefile
config.status: creating etc/Makeconf
config.status: creating etc/Renviron
config.status: creating m4/Makefile
config.status: creating share/Makefile
config.status: creating src/Makefile
config.status: creating src/appl/Makefile
config.status: creating src/extra/Makefile
config.status: creating src/extra/xdr/Makefile
config.status: creating src/extra/zlib/Makefile
config.status: creating src/include/Makefile
config.status: creating src/include/Rmath.h
config.status: creating src/include/R_ext/Makefile
config.status: creating src/library/Makefile
config.status: creating src/library/base/DESCRIPTION
config.status: creating src/library/base/Makefile
config.status: creating src/library/ctest/DESCRIPTION
config.status: creating src/library/ctest/Makefile
config.status: creating src/library/ctest/src/Makefile
config.status: creating src/library/eda/DESCRIPTION
config.status: creating src/library/eda/Makefile
config.status: creating src/library/eda/src/Makefile
config.status: creating src/library/lqs/DESCRIPTION
config.status: creating src/library/lqs/Makefile
config.status: creating src/library/lqs/src/Makefile
config.status: creating src/library/methods/DESCRIPTION
config.status: creating src/library/methods/Makefile
config.status: creating src/library/methods/src/Makefile
config.status: creating src/library/modreg/DESCRIPTION
config.status: creating src/library/modreg/Makefile
config.status: creating src/library/modreg/src/Makefile
config.status: creating src/library/mva/DESCRIPTION
config.status: creating src/library/mva/Makefile
config.status: creating src/library/mva/src/Makefile
config.status: creating src/library/nls/DESCRIPTION
config.status: creating src/library/nls/Makefile
config.status: creating src/library/nls/src/Makefile
config.status: creating src/library/profile/Makefile
config.status: creating src/library/stepfun/DESCRIPTION
config.status: creating src/library/stepfun/Makefile
config.status: creating src/library/splines/DESCRIPTION
config.status: creating src/library/splines/Makefile
config.status: creating src/library/splines/src/Makefile
config.status: creating src/library/tcltk/DESCRIPTION
config.status: creating src/library/tcltk/Makefile
config.status: creating src/library/tcltk/src/Makefile
config.status: creating src/library/tools/DESCRIPTION
config.status: creating src/library/tools/Makefile
config.status: creating src/library/ts/DESCRIPTION
config.status: creating src/library/ts/Makefile
config.status: creating src/library/ts/src/Makefile
config.status: creating src/main/Makefile
config.status: creating src/modules/Makefile
config.status: creating src/modules/X11/Makefile
config.status: creating src/modules/gnome/Makefile
config.status: creating src/modules/internet/Makefile
config.status: creating src/modules/lapack/Makefile
config.status: creating src/modules/vfonts/Makefile
config.status: creating src/nmath/Makefile
config.status: creating src/nmath/standalone/Makefile
config.status: creating src/scripts/Makefile
config.status: creating src/scripts/COMPILE
config.status: creating src/scripts/INSTALL
config.status: creating src/scripts/REMOVE
config.status: creating src/scripts/R.sh
config.status: creating src/scripts/Rdconv
config.status: creating src/scripts/Rdindex
config.status: creating src/scripts/Rprof
config.status: creating src/scripts/SHLIB
config.status: creating src/scripts/Sd2Rd
config.status: creating src/scripts/build
config.status: creating src/scripts/check
config.status: creating src/scripts/f77
config.status: creating src/unix/Makefile
config.status: creating tests/Makefile
config.status: creating tests/Embedding/Makefile
config.status: creating tests/Examples/Makefile
config.status: creating tools/Makefile
config.status: creating src/include/config.h
config.status: executing stamp-h commands

R is now configured for alphaev56-dec-osf5.1

  Source directory:          .
  Installation directory:    /soft/R/v1.5.1
  C compiler:                /usr/bin/cc  -std1 -ieee_with_inexact 
-I/soft/readline/v4.2.1/include
  C++ compiler:              /usr/bin/cxx  -ieee -g
  FORTRAN compiler:          /usr/bin/f77  -fpe3 -g

  X11 support:               yes
  Gnome support:             no
  Tcl/Tk support:            yes
  Readline support:          yes

  R profiling support:       yes
  R as a shared library:     no

configure: WARNING: I could not determine SHLIB_CXXLDFLAGS
configure: WARNING: you cannot build info versions of the R manuals

------------------------------------------------------
gmake.out:
gmake[1]: Entering directory `/soft/R/R-1.5.1/m4'
gmake[1]: Nothing to be done for `R'.
gmake[1]: Leaving directory `/soft/R/R-1.5.1/m4'
gmake[1]: Entering directory `/soft/R/R-1.5.1/tools'
gmake[1]: Nothing to be done for `R'.
gmake[1]: Leaving directory `/soft/R/R-1.5.1/tools'
gmake[1]: Entering directory `/soft/R/R-1.5.1/afm'
gmake[1]: Leaving directory `/soft/R/R-1.5.1/afm'
gmake[1]: Entering directory `/soft/R/R-1.5.1/doc'
gmake[2]: Entering directory `/soft/R/R-1.5.1/doc/html'
gmake[3]: Entering directory `/soft/R/R-1.5.1/doc/html/search'
gmake[3]: Leaving directory `/soft/R/R-1.5.1/doc/html/search'
gmake[2]: Leaving directory `/soft/R/R-1.5.1/doc/html'
gmake[2]: Entering directory `/soft/R/R-1.5.1/doc/manual'
gmake[2]: Nothing to be done for `R'.
gmake[2]: Leaving directory `/soft/R/R-1.5.1/doc/manual'
gmake[1]: Leaving directory `/soft/R/R-1.5.1/doc'
gmake[1]: Entering directory `/soft/R/R-1.5.1/etc'
gmake[1]: Nothing to be done for `R'.
gmake[1]: Leaving directory `/soft/R/R-1.5.1/etc'
gmake[1]: Entering directory `/soft/R/R-1.5.1/share'
gmake[1]: Leaving directory `/soft/R/R-1.5.1/share'
gmake[1]: Entering directory `/soft/R/R-1.5.1/src'
gmake[2]: Entering directory `/soft/R/R-1.5.1/src/scripts'
creating src/scripts/R.fe
gmake[3]: Entering directory `/soft/R/R-1.5.1/src/scripts'
mkdir -p -- ../../bin
gmake[3]: Leaving directory `/soft/R/R-1.5.1/src/scripts'
gmake[2]: Leaving directory `/soft/R/R-1.5.1/src/scripts'
gmake[2]: Entering directory `/soft/R/R-1.5.1/src/include'
mkdir -p -- ../../include
gmake[3]: Entering directory `/soft/R/R-1.5.1/src/include/R_ext'
mkdir -p -- ../../../include/R_ext
gmake[3]: Leaving directory `/soft/R/R-1.5.1/src/include/R_ext'
gmake[2]: Leaving directory `/soft/R/R-1.5.1/src/include'
gmake[2]: Entering directory `/soft/R/R-1.5.1/src/appl'
gmake[3]: Entering directory `/soft/R/R-1.5.1/src/appl'
making approx.d from approx.c
making bakslv.d from bakslv.c
making bandwidths.d from bandwidths.c
making binning.d from binning.c
making chull.d from chull.c
making cpoly.d from cpoly.c
making cumsum.d from cumsum.c
making fft.d from fft.c
making fmin.d from fmin.c
making integrate.d from integrate.c
making interv.d from interv.c
making lbfgsb.d from lbfgsb.c
making loglin.d from loglin.c
making lowess.d from lowess.c
making machar.d from machar.c
making maxcol.d from maxcol.c
making massdist.d from massdist.c
making pretty.d from pretty.c
making rowsum.d from rowsum.c
making splines.d from splines.c
making stem.d from stem.c
making strsignif.d from strsignif.c
making tabulate.d from tabulate.c
making uncmin.d from uncmin.c
making zeroin.d from zeroin.c
gmake[3]: Leaving directory `/soft/R/R-1.5.1/src/appl'
gmake[3]: Entering directory `/soft/R/R-1.5.1/src/appl'
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c approx.c -o approx.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c bakslv.c -o bakslv.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c bandwidths.c -o bandwidths.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c binning.c -o binning.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c chull.c -o chull.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c cpoly.c -o cpoly.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c cumsum.c -o cumsum.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c fft.c -o fft.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c fmin.c -o fmin.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c integrate.c -o integrate.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c interv.c -o interv.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c lbfgsb.c -o lbfgsb.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c loglin.c -o loglin.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c lowess.c -o lowess.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c machar.c -o machar.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c maxcol.c -o maxcol.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c massdist.c -o massdist.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c pretty.c -o pretty.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c rowsum.c -o rowsum.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c splines.c -o splines.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c stem.c -o stem.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c strsignif.c -o strsignif.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c tabulate.c -o tabulate.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c uncmin.c -o uncmin.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c zeroin.c -o zeroin.o
/usr/bin/f77 -fpe3  -g -c ch2inv.f -o ch2inv.o
/usr/bin/f77 -fpe3  -g -c chol.f -o chol.o
/usr/bin/f77 -fpe3  -g -c dchdc.f -o dchdc.o
/usr/bin/f77 -fpe3  -g -c dpbfa.f -o dpbfa.o
/usr/bin/f77 -fpe3  -g -c dpbsl.f -o dpbsl.o
/usr/bin/f77 -fpe3  -g -c dpoco.f -o dpoco.o
/usr/bin/f77 -fpe3  -g -c dpodi.f -o dpodi.o
/usr/bin/f77 -fpe3  -g -c dpofa.f -o dpofa.o
/usr/bin/f77 -fpe3  -g -c dposl.f -o dposl.o
/usr/bin/f77 -fpe3  -g -c dqrdc.f -o dqrdc.o
/usr/bin/f77 -fpe3  -g -c dqrdc2.f -o dqrdc2.o
/usr/bin/f77 -fpe3  -g -c dqrls.f -o dqrls.o
/usr/bin/f77 -fpe3  -g -c dqrsl.f -o dqrsl.o
/usr/bin/f77 -fpe3  -g -c dqrutl.f -o dqrutl.o
/usr/bin/f77 -fpe3  -g -c dsvdc.f -o dsvdc.o
/usr/bin/f77 -fpe3  -g -c dtrco.f -o dtrco.o
/usr/bin/f77 -fpe3  -g -c dtrsl.f -o dtrsl.o
/usr/bin/f77 -fpe3  -g -c eigen.f -o eigen.o
/usr/bin/f77 -fpe3  -g -c lminfl.f -o lminfl.o
/usr/bin/f77 -fpe3  -g -c blas.f -o blas.o
ar cr libappl.a approx.o bakslv.o bandwidths.o binning.o chull.o cpoly.o 
cumsum.o fft.o fmin.o integrate.o interv.o lbfgsb.o loglin.o lowess.o 
machar.o maxcol.o massdist.o pretty.o rowsum.o splines.o stem.o strsignif.o 
tabulate.o uncmin.o zeroin.o ch2inv.o chol.o dchdc.o dpbfa.o dpbsl.o dpoco.o 
dpodi.o dpofa.o dposl.o dqrdc.o dqrdc2.o dqrls.o dqrsl.o dqrutl.o dsvdc.o 
dtrco.o dtrsl.o eigen.o lminfl.o blas.o
ranlib libappl.a
gmake[3]: Leaving directory `/soft/R/R-1.5.1/src/appl'
gmake[2]: Leaving directory `/soft/R/R-1.5.1/src/appl'
gmake[2]: Entering directory `/soft/R/R-1.5.1/src/nmath'
gmake[3]: Entering directory `/soft/R/R-1.5.1/src/nmath'
making mlutils.d from mlutils.c
making d1mach.d from d1mach.c
making i1mach.d from i1mach.c
making fmax2.d from fmax2.c
making fmin2.d from fmin2.c
making fprec.d from fprec.c
making fround.d from fround.c
making ftrunc.d from ftrunc.c
making sign.d from sign.c
making fsign.d from fsign.c
making imax2.d from imax2.c
making imin2.d from imin2.c
making chebyshev.d from chebyshev.c
making log1p.d from log1p.c
making expm1.d from expm1.c
making lgammacor.d from lgammacor.c
making gammalims.d from gammalims.c
making stirlerr.d from stirlerr.c
making bd0.d from bd0.c
making gamma.d from gamma.c
making lgamma.d from lgamma.c
making gamma_cody.d from gamma_cody.c
making beta.d from beta.c
making lbeta.d from lbeta.c
making polygamma.d from polygamma.c
making bessel_i.d from bessel_i.c
making bessel_j.d from bessel_j.c
making bessel_k.d from bessel_k.c
making bessel_y.d from bessel_y.c
making choose.d from choose.c
making snorm.d from snorm.c
making sexp.d from sexp.c
making dgamma.d from dgamma.c
making pgamma.d from pgamma.c
making qgamma.d from qgamma.c
making rgamma.d from rgamma.c
making dbeta.d from dbeta.c
making pbeta.d from pbeta.c
making qbeta.d from qbeta.c
making rbeta.d from rbeta.c
making dunif.d from dunif.c
making punif.d from punif.c
making qunif.d from qunif.c
making runif.d from runif.c
making dnorm.d from dnorm.c
making pnorm.d from pnorm.c
making qnorm.d from qnorm.c
making rnorm.d from rnorm.c
making dlnorm.d from dlnorm.c
making plnorm.d from plnorm.c
making qlnorm.d from qlnorm.c
making rlnorm.d from rlnorm.c
making df.d from df.c
making pf.d from pf.c
making qf.d from qf.c
making rf.d from rf.c
making dt.d from dt.c
making pt.d from pt.c
making qt.d from qt.c
making rt.d from rt.c
making dchisq.d from dchisq.c
making pchisq.d from pchisq.c
making qchisq.d from qchisq.c
making rchisq.d from rchisq.c
making dbinom.d from dbinom.c
making pbinom.d from pbinom.c
making qbinom.d from qbinom.c
making rbinom.d from rbinom.c
making dcauchy.d from dcauchy.c
making pcauchy.d from pcauchy.c
making qcauchy.d from qcauchy.c
making rcauchy.d from rcauchy.c
making dexp.d from dexp.c
making pexp.d from pexp.c
making qexp.d from qexp.c
making rexp.d from rexp.c
making dgeom.d from dgeom.c
making pgeom.d from pgeom.c
making qgeom.d from qgeom.c
making rgeom.d from rgeom.c
making dhyper.d from dhyper.c
making phyper.d from phyper.c
making qhyper.d from qhyper.c
making rhyper.d from rhyper.c
making dnbinom.d from dnbinom.c
making pnbinom.d from pnbinom.c
making qnbinom.d from qnbinom.c
making rnbinom.d from rnbinom.c
making dpois.d from dpois.c
making ppois.d from ppois.c
making qpois.d from qpois.c
making rpois.d from rpois.c
making dweibull.d from dweibull.c
making pweibull.d from pweibull.c
making qweibull.d from qweibull.c
making rweibull.d from rweibull.c
making dlogis.d from dlogis.c
making plogis.d from plogis.c
making qlogis.d from qlogis.c
making rlogis.d from rlogis.c
making dnchisq.d from dnchisq.c
making pnchisq.d from pnchisq.c
making qnchisq.d from qnchisq.c
making dnbeta.d from dnbeta.c
making pnbeta.d from pnbeta.c
making pnf.d from pnf.c
making pnt.d from pnt.c
making ptukey.d from ptukey.c
making qtukey.d from qtukey.c
making wilcox.d from wilcox.c
making signrank.d from signrank.c
gmake[3]: Leaving directory `/soft/R/R-1.5.1/src/nmath'
gmake[3]: Entering directory `/soft/R/R-1.5.1/src/nmath'
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c mlutils.c -o mlutils.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c d1mach.c -o d1mach.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c i1mach.c -o i1mach.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c fmax2.c -o fmax2.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c fmin2.c -o fmin2.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c fprec.c -o fprec.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c fround.c -o fround.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c ftrunc.c -o ftrunc.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c sign.c -o sign.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c fsign.c -o fsign.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c imax2.c -o imax2.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c imin2.c -o imin2.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c chebyshev.c -o chebyshev.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c log1p.c -o log1p.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c expm1.c -o expm1.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c lgammacor.c -o lgammacor.o
cc: Warning: lgammacor.c, line 94: In this statement, underflow occurs in 
evaluating the expression
"2.2250738585072014e-308*2.2250738585072014e-308".
(underflow)
	return ML_UNDERFLOW;
---------------^
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c gammalims.c -o gammalims.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c stirlerr.c -o stirlerr.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c bd0.c -o bd0.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c gamma.c -o gamma.o
cc: Warning: gamma.c, line 185: In this statement, underflow occurs in 
evaluating the expression
"2.2250738585072014e-308*2.2250738585072014e-308".
(underflow)
	    return ML_UNDERFLOW;
-------------------^
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c lgamma.c -o lgamma.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c gamma_cody.c -o gamma_cody.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c beta.c -o beta.o
cc: Warning: beta.c, line 84: In this statement, underflow occurs in 
evaluating the expression
"2.2250738585072014e-308*2.2250738585072014e-308".
(underflow)
	return ML_UNDERFLOW;
---------------^
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c lbeta.c -o lbeta.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c polygamma.c -o polygamma.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c bessel_i.c -o bessel_i.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c bessel_j.c -o bessel_j.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c bessel_k.c -o bessel_k.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c bessel_y.c -o bessel_y.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c choose.c -o choose.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c snorm.c -o snorm.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c sexp.c -o sexp.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c dgamma.c -o dgamma.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c pgamma.c -o pgamma.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c qgamma.c -o qgamma.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c rgamma.c -o rgamma.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c dbeta.c -o dbeta.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c pbeta.c -o pbeta.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c qbeta.c -o qbeta.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c rbeta.c -o rbeta.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c dunif.c -o dunif.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c punif.c -o punif.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c qunif.c -o qunif.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c runif.c -o runif.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c dnorm.c -o dnorm.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c pnorm.c -o pnorm.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c qnorm.c -o qnorm.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c rnorm.c -o rnorm.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c dlnorm.c -o dlnorm.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c plnorm.c -o plnorm.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c qlnorm.c -o qlnorm.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c rlnorm.c -o rlnorm.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c df.c -o df.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c pf.c -o pf.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c qf.c -o qf.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c rf.c -o rf.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c dt.c -o dt.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c pt.c -o pt.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c qt.c -o qt.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c rt.c -o rt.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c dchisq.c -o dchisq.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c pchisq.c -o pchisq.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c qchisq.c -o qchisq.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c rchisq.c -o rchisq.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c dbinom.c -o dbinom.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c pbinom.c -o pbinom.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c qbinom.c -o qbinom.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c rbinom.c -o rbinom.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c dcauchy.c -o dcauchy.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c pcauchy.c -o pcauchy.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c qcauchy.c -o qcauchy.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c rcauchy.c -o rcauchy.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c dexp.c -o dexp.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c pexp.c -o pexp.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c qexp.c -o qexp.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c rexp.c -o rexp.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c dgeom.c -o dgeom.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c pgeom.c -o pgeom.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c qgeom.c -o qgeom.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c rgeom.c -o rgeom.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c dhyper.c -o dhyper.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c phyper.c -o phyper.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c qhyper.c -o qhyper.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c rhyper.c -o rhyper.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c dnbinom.c -o dnbinom.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c pnbinom.c -o pnbinom.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c qnbinom.c -o qnbinom.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c rnbinom.c -o rnbinom.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c dpois.c -o dpois.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c ppois.c -o ppois.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c qpois.c -o qpois.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c rpois.c -o rpois.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c dweibull.c -o dweibull.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c pweibull.c -o pweibull.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c qweibull.c -o qweibull.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c rweibull.c -o rweibull.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c dlogis.c -o dlogis.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c plogis.c -o plogis.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c qlogis.c -o qlogis.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c rlogis.c -o rlogis.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c dnchisq.c -o dnchisq.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c pnchisq.c -o pnchisq.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c qnchisq.c -o qnchisq.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c dnbeta.c -o dnbeta.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c pnbeta.c -o pnbeta.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c pnf.c -o pnf.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c pnt.c -o pnt.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c ptukey.c -o ptukey.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c qtukey.c -o qtukey.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c wilcox.c -o wilcox.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c signrank.c -o signrank.o
ar cr libnmath.a mlutils.o d1mach.o i1mach.o fmax2.o fmin2.o fprec.o fround.o 
ftrunc.o sign.o fsign.o imax2.o imin2.o chebyshev.o log1p.o expm1.o 
lgammacor.o gammalims.o stirlerr.o bd0.o gamma.o lgamma.o gamma_cody.o beta.o 
lbeta.o polygamma.o bessel_i.o bessel_j.o bessel_k.o bessel_y.o choose.o 
snorm.o sexp.o dgamma.o pgamma.o qgamma.o rgamma.o dbeta.o pbeta.o qbeta.o 
rbeta.o dunif.o punif.o qunif.o runif.o dnorm.o pnorm.o qnorm.o rnorm.o 
dlnorm.o plnorm.o qlnorm.o rlnorm.o df.o pf.o qf.o rf.o dt.o pt.o qt.o rt.o 
dchisq.o pchisq.o qchisq.o rchisq.o dbinom.o pbinom.o qbinom.o rbinom.o 
dcauchy.o pcauchy.o qcauchy.o rcauchy.o dexp.o pexp.o qexp.o rexp.o dgeom.o 
pgeom.o qgeom.o rgeom.o dhyper.o phyper.o qhyper.o rhyper.o dnbinom.o 
pnbinom.o qnbinom.o rnbinom.o dpois.o ppois.o qpois.o rpois.o dweibull.o 
pweibull.o qweibull.o rweibull.o dlogis.o plogis.o qlogis.o rlogis.o 
dnchisq.o pnchisq.o qnchisq.o dnbeta.o pnbeta.o pnf.o pnt.o ptukey.o qtukey.o 
wilcox.o signrank.o
ranlib libnmath.a
gmake[3]: Leaving directory `/soft/R/R-1.5.1/src/nmath'
gmake[2]: Leaving directory `/soft/R/R-1.5.1/src/nmath'
gmake[2]: Entering directory `/soft/R/R-1.5.1/src/unix'
config.status: creating src/unix/Makefile
gmake[2]: Leaving directory `/soft/R/R-1.5.1/src/unix'
gmake[2]: Entering directory `/soft/R/R-1.5.1/src/unix'
gmake[3]: Entering directory `/soft/R/R-1.5.1/src/unix'
making devices.d from devices.c
making dynload.d from dynload.c
making edit.d from edit.c
making gnome.d from gnome.c
making stubs.d from stubs.c
making system.d from system.c
making sys-unix.d from sys-unix.c
making sys-common.d from sys-common.c
making sys-std.d from sys-std.c
making X11.d from X11.c
gmake[3]: Leaving directory `/soft/R/R-1.5.1/src/unix'
gmake[3]: Entering directory `/soft/R/R-1.5.1/src/unix'
/usr/bin/cc -I. -I../../src/include -I../../src/include  
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c devices.c -o devices.o
/usr/bin/cc -I. -I../../src/include -I../../src/include  
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c dynload.c -o dynload.o
cc: Info: dynload.c, line 236: In this statement, "dlsym(...)" of type
"pointer to void", is being converted to "pointer to function ()
returning
pointer to void".  Such a cast is not permitted by the standard. 
(nonstandcast)
    return (DL_FUNC) dlsym(info->handle, name);
---------------------^
/usr/bin/cc -I. -I../../src/include -I../../src/include  
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c edit.c -o edit.o
/usr/bin/cc -I. -I../../src/include -I../../src/include  
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c gnome.c -o gnome.o
/usr/bin/cc -I. -I../../src/include -I../../src/include  
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c stubs.c -o stubs.o
/usr/bin/cc -I. -I../../src/include -I../../src/include  
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c system.c -o system.o
/usr/bin/cc -I. -I../../src/include -I../../src/include  
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c sys-unix.c -o sys-unix.o
/usr/bin/cc -I. -I../../src/include -I../../src/include  
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c sys-common.c -o sys-common.o
cc: Info: sys-common.c, line 687: In this statement, an array is being 
accessed outside the bounds specified for the array type. (subscrbounds)
	sm[BUF_SIZE] = '\0';
-----------^
/usr/bin/cc -I. -I../../src/include -I../../src/include  
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c sys-std.c -o sys-std.o
/usr/bin/cc -I. -I../../src/include -I../../src/include  
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c X11.c -o X11.o
cc: Info: X11.c, line 69: In this statement, "dlsym(...)" of type
"pointer to
void", is being converted to "pointer to function () returning pointer
to
void".  Such a cast is not permitted by the standard. (nonstandcast)
    return (DL_FUNC) dlsym(handle, buf);
---------------------^
ar cr libunix.a devices.o dynload.o edit.o gnome.o stubs.o system.o sys-unix.o 
sys-common.o sys-std.o X11.o
ranlib libunix.a
gmake[3]: Leaving directory `/soft/R/R-1.5.1/src/unix'
gmake[2]: Leaving directory `/soft/R/R-1.5.1/src/unix'
gmake[2]: Entering directory `/soft/R/R-1.5.1/src/extra'
gmake[3]: Entering directory `/soft/R/R-1.5.1/src/extra/zlib'
gmake[4]: Entering directory `/soft/R/R-1.5.1/src/extra/zlib'
making adler32.d from adler32.c
making compress.d from compress.c
making crc32.d from crc32.c
making deflate.d from deflate.c
making gzio.d from gzio.c
making infblock.d from infblock.c
making infcodes.d from infcodes.c
making inffast.d from inffast.c
making inflate.d from inflate.c
making inftrees.d from inftrees.c
making infutil.d from infutil.c
making trees.d from trees.c
making uncompr.d from uncompr.c
making zutil.d from zutil.c
gmake[4]: Leaving directory `/soft/R/R-1.5.1/src/extra/zlib'
gmake[4]: Entering directory `/soft/R/R-1.5.1/src/extra/zlib'
/usr/bin/cc -I.  -DUSE_MMAP -I. -I../../../src/include -I../../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact   
-I/soft/readline/v4.2.1/include -c adler32.c -o adler32.o
/usr/bin/cc -I.  -DUSE_MMAP -I. -I../../../src/include -I../../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact   
-I/soft/readline/v4.2.1/include -c compress.c -o compress.o
/usr/bin/cc -I.  -DUSE_MMAP -I. -I../../../src/include -I../../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact   
-I/soft/readline/v4.2.1/include -c crc32.c -o crc32.o
/usr/bin/cc -I.  -DUSE_MMAP -I. -I../../../src/include -I../../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact   
-I/soft/readline/v4.2.1/include -c deflate.c -o deflate.o
/usr/bin/cc -I.  -DUSE_MMAP -I. -I../../../src/include -I../../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact   
-I/soft/readline/v4.2.1/include -c gzio.c -o gzio.o
/usr/bin/cc -I.  -DUSE_MMAP -I. -I../../../src/include -I../../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact   
-I/soft/readline/v4.2.1/include -c infblock.c -o infblock.o
/usr/bin/cc -I.  -DUSE_MMAP -I. -I../../../src/include -I../../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact   
-I/soft/readline/v4.2.1/include -c infcodes.c -o infcodes.o
/usr/bin/cc -I.  -DUSE_MMAP -I. -I../../../src/include -I../../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact   
-I/soft/readline/v4.2.1/include -c inffast.c -o inffast.o
/usr/bin/cc -I.  -DUSE_MMAP -I. -I../../../src/include -I../../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact   
-I/soft/readline/v4.2.1/include -c inflate.c -o inflate.o
/usr/bin/cc -I.  -DUSE_MMAP -I. -I../../../src/include -I../../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact   
-I/soft/readline/v4.2.1/include -c inftrees.c -o inftrees.o
/usr/bin/cc -I.  -DUSE_MMAP -I. -I../../../src/include -I../../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact   
-I/soft/readline/v4.2.1/include -c infutil.c -o infutil.o
/usr/bin/cc -I.  -DUSE_MMAP -I. -I../../../src/include -I../../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact   
-I/soft/readline/v4.2.1/include -c trees.c -o trees.o
/usr/bin/cc -I.  -DUSE_MMAP -I. -I../../../src/include -I../../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact   
-I/soft/readline/v4.2.1/include -c uncompr.c -o uncompr.o
/usr/bin/cc -I.  -DUSE_MMAP -I. -I../../../src/include -I../../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact   
-I/soft/readline/v4.2.1/include -c zutil.c -o zutil.o
ar cr libz.a adler32.o compress.o crc32.o deflate.o gzio.o infblock.o 
infcodes.o inffast.o inflate.o inftrees.o infutil.o trees.o uncompr.o zutil.o
ranlib libz.a
gmake[4]: Leaving directory `/soft/R/R-1.5.1/src/extra/zlib'
gmake[3]: Leaving directory `/soft/R/R-1.5.1/src/extra/zlib'
gmake[2]: Leaving directory `/soft/R/R-1.5.1/src/extra'
gmake[2]: Entering directory `/soft/R/R-1.5.1/src/main'
config.status: creating src/main/Makefile
gmake[2]: Leaving directory `/soft/R/R-1.5.1/src/main'
gmake[2]: Entering directory `/soft/R/R-1.5.1/src/main'
gmake[3]: Entering directory `/soft/R/R-1.5.1/src/main'
making CConverters.d from CConverters.c
making Rdynload.d from Rdynload.c
making RNG.d from RNG.c
making apply.d from apply.c
making arithmetic.d from arithmetic.c
making array.d from array.c
making attrib.d from attrib.c
making base.d from base.c
making bind.d from bind.c
making builtin.d from builtin.c
making character.d from character.c
making coerce.d from coerce.c
making colors.d from colors.c
making complex.d from complex.c
making connections.d from connections.c
cc: Error: connections.c, line 775: Cannot find file <zlib.h> specified in
#include directive. (noinclfile)
#include <zlib.h>
-^
making context.d from context.c
making cov.d from cov.c
making cum.d from cum.c
making dcf.d from dcf.c
making datetime.d from datetime.c
making debug.d from debug.c
making devPS.d from devPS.c
making devPicTeX.d from devPicTeX.c
making deparse.d from deparse.c
making deriv.d from deriv.c
making devices.d from devices.c
making dotcode.d from dotcode.c
making dounzip.d from dounzip.c
cc: Error: unzip.h, line 49: Cannot find file "zlib.h" specified in
#include
directive. (noinclfile)
#include "zlib.h"
-^
cc: Error: dounzip.c, line 366: Cannot find file "zlib.h" specified in
#include directive. (noinclfile)
#include "zlib.h"
-^
making dstruct.d from dstruct.c
making duplicate.d from duplicate.c
making engine.d from engine.c
making envir.d from envir.c
making errors.d from errors.c
making eval.d from eval.c
making format.d from format.c
making fourier.d from fourier.c
making gram.d from gram.c
making gram-ex.d from gram-ex.c
making graphics.d from graphics.c
making identical.d from identical.c
making internet.d from internet.c
making iosupport.d from iosupport.c
making lapack.d from lapack.c
making list.d from list.c
making logic.d from logic.c
making main.d from main.c
making match.d from match.c
making memory.d from memory.c
making model.d from model.c
making names.d from names.c
making objects.d from objects.c
making optim.d from optim.c
making optimize.d from optimize.c
making options.d from options.c
making par.d from par.c
making paste.d from paste.c
making platform.d from platform.c
making plot.d from plot.c
making plot3d.d from plot3d.c
making plotmath.d from plotmath.c
making print.d from print.c
making printarray.d from printarray.c
making printvector.d from printvector.c
making printutils.d from printutils.c
making qsort.d from qsort.c
making random.d from random.c
making regex.d from regex.c
making relop.d from relop.c
making saveload.d from saveload.c
making scan.d from scan.c
making seq.d from seq.c
making serialize.d from serialize.c
making size.d from size.c
making sort.d from sort.c
making source.d from source.c
making split.d from split.c
making sprintf.d from sprintf.c
making subassign.d from subassign.c
making subscript.d from subscript.c
making subset.d from subset.c
making summary.d from summary.c
making unique.d from unique.c
making util.d from util.c
making version.d from version.c
making vfonts.d from vfonts.c
making alloca.d from alloca.c
making acosh.d from acosh.c
making asinh.d from asinh.c
making atanh.d from atanh.c
making snprintf.d from snprintf.c
making strdup.d from strdup.c
making strncasecmp.d from strncasecmp.c
making vsnprintf.d from vsnprintf.c
gmake[3]: Leaving directory `/soft/R/R-1.5.1/src/main'
gmake[3]: Entering directory `/soft/R/R-1.5.1/src/main'
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c CConverters.c -o CConverters.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c Rdynload.c -o Rdynload.o
cc: Info: Rdynload.c, line 805: In this statement, "f" of type
"pointer to
function () returning pointer to void", is being converted to "pointer
to
void".  Such a cast is not permitted by the standard. (nonstandcast)
  PROTECT(ref = R_MakeExternalPtr((void*) f, Rf_install("native
symbol"),
NULL));
--^
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c RNG.c -o RNG.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c apply.c -o apply.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c arithmetic.c -o arithmetic.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c array.c -o array.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c attrib.c -o attrib.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c base.c -o base.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c bind.c -o bind.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c builtin.c -o builtin.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c character.c -o character.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c coerce.c -o coerce.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c colors.c -o colors.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c complex.c -o complex.o
/usr/bin/cc -I../../src/extra/zlib -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c connections.c -o connections.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c context.c -o context.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c cov.c -o cov.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c cum.c -o cum.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c dcf.c -o dcf.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c datetime.c -o datetime.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c debug.c -o debug.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c devPS.c -o devPS.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c devPicTeX.c -o devPicTeX.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c deparse.c -o deparse.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c deriv.c -o deriv.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c devices.c -o devices.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c dotcode.c -o dotcode.o
cc: Info: dotcode.c, line 226: In this statement, an array is being accessed 
outside the bounds specified for the array type. (subscrbounds)
	    buf[256] = '\0';
----------------^
/usr/bin/cc -I../../src/extra/zlib -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c dounzip.c -o dounzip.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c dstruct.c -o dstruct.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c duplicate.c -o duplicate.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c engine.c -o engine.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c envir.c -o envir.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c errors.c -o errors.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c eval.c -o eval.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c format.c -o format.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c fourier.c -o fourier.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c gram.c -o gram.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c gram-ex.c -o gram-ex.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c graphics.c -o graphics.o
cc: Info: graphics.c, line 5948: In this statement, an array is being accessed 
outside the bounds specified for the array type. (subscrbounds)
    Rf_dpptr(dd)->fin[2] = Rf_dpSavedptr(dd)->fin[2];
----------------------^
cc: Info: graphics.c, line 5948: In this statement, an array is being accessed 
outside the bounds specified for the array type. (subscrbounds)
    Rf_dpptr(dd)->fin[2] = Rf_dpSavedptr(dd)->fin[2];
--------------------------------------------------^
cc: Info: graphics.c, line 5949: In this statement, an array is being accessed 
outside the bounds specified for the array type. (subscrbounds)
    Rf_dpptr(dd)->fin[3] = Rf_dpSavedptr(dd)->fin[3];
----------------------^
cc: Info: graphics.c, line 5949: In this statement, an array is being accessed 
outside the bounds specified for the array type. (subscrbounds)
    Rf_dpptr(dd)->fin[3] = Rf_dpSavedptr(dd)->fin[3];
--------------------------------------------------^
cc: Info: graphics.c, line 6002: In this statement, an array is being accessed 
outside the bounds specified for the array type. (subscrbounds)
    Rf_dpptr(dd)->pin[2] = Rf_dpSavedptr(dd)->pin[2];
----------------------^
cc: Info: graphics.c, line 6002: In this statement, an array is being accessed 
outside the bounds specified for the array type. (subscrbounds)
    Rf_dpptr(dd)->pin[2] = Rf_dpSavedptr(dd)->pin[2];
--------------------------------------------------^
cc: Info: graphics.c, line 6003: In this statement, an array is being accessed 
outside the bounds specified for the array type. (subscrbounds)
    Rf_dpptr(dd)->pin[3] = Rf_dpSavedptr(dd)->pin[3];
----------------------^
cc: Info: graphics.c, line 6003: In this statement, an array is being accessed 
outside the bounds specified for the array type. (subscrbounds)
    Rf_dpptr(dd)->pin[3] = Rf_dpSavedptr(dd)->pin[3];
--------------------------------------------------^
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c identical.c -o identical.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c internet.c -o internet.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c iosupport.c -o iosupport.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c lapack.c -o lapack.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c list.c -o list.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c logic.c -o logic.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c main.c -o main.o
cc: Info: main.c, line 130: In this statement, an array is being accessed 
outside the bounds specified for the array type. (subscrbounds)
    buf[1025] = '\0'; /* stopgap measure if line > 1024 chars */
--------^
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c match.c -o match.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c memory.c -o memory.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c model.c -o model.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c names.c -o names.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c objects.c -o objects.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c optim.c -o optim.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c optimize.c -o optimize.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c options.c -o options.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c par.c -o par.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c paste.c -o paste.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c platform.c -o platform.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c plot.c -o plot.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c plot3d.c -o plot3d.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c plotmath.c -o plotmath.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c print.c -o print.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c printarray.c -o printarray.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c printvector.c -o printvector.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c printutils.c -o printutils.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c qsort.c -o qsort.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c random.c -o random.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c regex.c -o regex.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c relop.c -o relop.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c saveload.c -o saveload.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c scan.c -o scan.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c seq.c -o seq.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c serialize.c -o serialize.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c size.c -o size.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c sort.c -o sort.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c source.c -o source.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c split.c -o split.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c sprintf.c -o sprintf.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c subassign.c -o subassign.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c subscript.c -o subscript.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c subset.c -o subset.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c summary.c -o summary.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c unique.c -o unique.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c util.c -o util.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c version.c -o version.o
/usr/bin/cc -I. -I../../src/include -I../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact  
-I/soft/readline/v4.2.1/include -c vfonts.c -o vfonts.o
/usr/bin/f77 -fpe3  -g -c xxxpr.f -o xxxpr.o
/usr/bin/cc  -L/soft/readline/v4.2.1/lib -o R.bin  CConverters.o Rdynload.o 
RNG.o apply.o arithmetic.o array.o attrib.o base.o bind.o builtin.o 
character.o coerce.o colors.o complex.o connections.o context.o cov.o cum.o 
dcf.o datetime.o debug.o devPS.o devPicTeX.o deparse.o deriv.o devices.o 
dotcode.o dounzip.o dstruct.o duplicate.o engine.o envir.o errors.o eval.o 
format.o fourier.o gram.o gram-ex.o graphics.o identical.o internet.o 
iosupport.o lapack.o list.o logic.o main.o match.o memory.o model.o names.o 
objects.o optim.o optimize.o options.o par.o paste.o platform.o plot.o 
plot3d.o plotmath.o print.o printarray.o printvector.o printutils.o qsort.o 
random.o regex.o relop.o saveload.o scan.o seq.o serialize.o size.o sort.o 
source.o split.o sprintf.o subassign.o subscript.o subset.o summary.o 
unique.o util.o version.o vfonts.o xxxpr.o ../unix/libunix.a 
../appl/libappl.a ../nmath/libnmath.a   -L/soft/readline/v4.2.1/lib 
-lreadline -ltermcap -lm -lUfor -lfor -lFutil -lots -lm_c32 -lmld -lexc  
./extra/zlib/libz.a -lreadline -ltermcap -lm
gmake[4]: Entering directory `/soft/R/R-1.5.1/src/main'
gmake[4]: Leaving directory `/soft/R/R-1.5.1/src/main'
gmake[3]: Leaving directory `/soft/R/R-1.5.1/src/main'
gmake[2]: Leaving directory `/soft/R/R-1.5.1/src/main'
gmake[2]: Entering directory `/soft/R/R-1.5.1/src/modules'
gmake[3]: Entering directory `/soft/R/R-1.5.1/src/modules/X11'
gmake[4]: Entering directory `/soft/R/R-1.5.1/src/modules/X11'
making dataentry.d from dataentry.c
making devX11.d from devX11.c
making rotated.d from rotated.c
making rbitmap.d from rbitmap.c
gmake[4]: Leaving directory `/soft/R/R-1.5.1/src/modules/X11'
gmake[4]: Entering directory `/soft/R/R-1.5.1/src/modules/X11'
/usr/bin/cc -I. -I../../../src/include -I../../../src/include  
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact   
-I/soft/readline/v4.2.1/include -c dataentry.c -o dataentry.lo
/usr/bin/cc -I. -I../../../src/include -I../../../src/include  
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact   
-I/soft/readline/v4.2.1/include -c devX11.c -o devX11.lo
/usr/bin/cc -I. -I../../../src/include -I../../../src/include  
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact   
-I/soft/readline/v4.2.1/include -c rotated.c -o rotated.lo
/usr/bin/cc -I. -I../../../src/include -I../../../src/include  
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact   
-I/soft/readline/v4.2.1/include -c rbitmap.c -o rbitmap.lo
/usr/bin/cc -shared -L/soft/readline/v4.2.1/lib -o R_X11.so  dataentry.lo 
devX11.lo rotated.lo rbitmap.lo  -lSM -lICE -lX11     -lreadline -ltermcap 
-lm
ld:
Warning: Unresolved:
R_NaReal
R_NaInt
Rf_error
Rf_warning
UNIMPLEMENTED
Rf_isBlankString
R_strtod
R_GlobalEnv
R_NilValue
R_NaString
Rf_coerceVector
Rf_PairToVectorList
Rf_VectorToPairList
Rf_allocString
Rf_allocVector
Rf_allocList
Rf_asInteger
Rf_duplicate
Rf_GetOption
Rf_install
Rf_isList
Rf_isVector
Rf_length
Rf_listAppend
Rf_nthcdr
Rf_PrintDefaults
Rf_protect
Rf_unprotect
SET_STRING_ELT
SET_TAG
SETCAR
SETCDR
Rf_begincontext
Rf_endcontext
Rf_str2type
Rf_errorcall
Rf_EncodeElement
vmaxget
vmaxset
R_alloc
Rprintf
Rf_elt
Rf_findVar
Rf_GetDevice
devNumber
GEplayDisplayList
addInputHandler
getInputHandler
removeInputHandler
R_InputHandlers
Rf_KillDevice
R_setX11Routines
gmake[5]: Entering directory `/soft/R/R-1.5.1/src/modules/X11'
mkdir -p -- /soft/R/R-1.5.1/modules
gmake[5]: Leaving directory `/soft/R/R-1.5.1/src/modules/X11'
gmake[4]: Leaving directory `/soft/R/R-1.5.1/src/modules/X11'
gmake[3]: Leaving directory `/soft/R/R-1.5.1/src/modules/X11'
gmake[3]: Entering directory `/soft/R/R-1.5.1/src/modules/internet'
gmake[4]: Entering directory `/soft/R/R-1.5.1/src/modules/internet'
making Rsock.d from Rsock.c
making internet.d from internet.c
making nanoftp.d from nanoftp.c
making nanohttp.d from nanohttp.c
making sock.d from sock.c
making sockconn.d from sockconn.c
gmake[4]: Leaving directory `/soft/R/R-1.5.1/src/modules/internet'
gmake[4]: Entering directory `/soft/R/R-1.5.1/src/modules/internet'
/usr/bin/cc -I. -I../../../src/include -I../../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact   
-I/soft/readline/v4.2.1/include -c Rsock.c -o Rsock.lo
cc: Warning: Rsock.c, line 380: In this statement, the referenced type of the 
pointer value "&len" is "unsigned long", which is not
compatible with "int".
(ptrmismatch)
	    if (getsockopt(s, SOL_SOCKET, SO_ERROR, (char*)&status, &len) <
0){
--------------------------------------------------------------------^
/usr/bin/cc -I. -I../../../src/include -I../../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact   
-I/soft/readline/v4.2.1/include -c internet.c -o internet.lo
/usr/bin/cc -I. -I../../../src/include -I../../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact   
-I/soft/readline/v4.2.1/include -c nanoftp.c -o nanoftp.lo
cc: Warning: nanoftp.c, line 1175: In this statement, the referenced type of 
the pointer value "&dataAddrLen" is "unsigned long",
which is not compatible
with "int". (ptrmismatch)
        getsockname(ctxt->dataFd, (struct sockaddr *) &dataAddr, 
&dataAddrLen);
-----------------------------------------------------------------^
cc: Warning: nanoftp.c, line 1182: In this statement, the referenced type of 
the pointer value "&dataAddrLen" is "unsigned long",
which is not compatible
with "int". (ptrmismatch)
        getsockname(ctxt->dataFd, (struct sockaddr *) &dataAddr, 
&dataAddrLen);
-----------------------------------------------------------------^
/usr/bin/cc -I. -I../../../src/include -I../../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact   
-I/soft/readline/v4.2.1/include -c nanohttp.c -o nanohttp.lo
cc: Warning: nanohttp.c, line 881: In this statement, the referenced type of 
the pointer value "&len" is "unsigned long", which is
not compatible with
"int". (ptrmismatch)
	    if (getsockopt(s, SOL_SOCKET, SO_ERROR, (char*)&status, &len) <
0){
--------------------------------------------------------------------^
/usr/bin/cc -I. -I../../../src/include -I../../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact   
-I/soft/readline/v4.2.1/include -c sock.c -o sock.lo
cc: Warning: sock.c, line 189: In this statement, the referenced type of the 
pointer value "&len" is "unsigned long", which is not
compatible with "int".
(ptrmismatch)
	retval = accept(fd, (struct sockaddr *)(&net_client), &len);
--------------------------------------------------------------^
/usr/bin/cc -I. -I../../../src/include -I../../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact   
-I/soft/readline/v4.2.1/include -c sockconn.c -o sockconn.lo
/usr/bin/cc -shared -L/soft/readline/v4.2.1/lib -o internet.so  Rsock.lo 
internet.lo nanoftp.lo nanohttp.lo sock.lo sockconn.lo 
ld:
Warning: Unresolved:
getSelectedHandler
R_InputHandlers
R_PolledEvents
R_wait_usec
R_NaInt
Rf_error
Rf_warning
Rprintf
REprintf
R_ExpandFileName
R_NilValue
Rf_allocVector
Rf_asInteger
Rf_asLogical
Rf_GetOption
Rf_install
Rf_isString
Rf_length
Rf_protect
Rf_unprotect
R_Consolefile
R_Busy
Rf_checkArity
R_fopen
init_con
R_setInternetRoutines
dummy_vfprintf
gmake[5]: Entering directory `/soft/R/R-1.5.1/src/modules/internet'
gmake[5]: Leaving directory `/soft/R/R-1.5.1/src/modules/internet'
gmake[4]: Leaving directory `/soft/R/R-1.5.1/src/modules/internet'
gmake[3]: Leaving directory `/soft/R/R-1.5.1/src/modules/internet'
gmake[3]: Entering directory `/soft/R/R-1.5.1/src/modules/lapack'
gmake[4]: Entering directory `/soft/R/R-1.5.1/src/modules/lapack'
making Lapack.d from Lapack.c
gmake[4]: Leaving directory `/soft/R/R-1.5.1/src/modules/lapack'
gmake[4]: Entering directory `/soft/R/R-1.5.1/src/modules/lapack'
/usr/bin/cc -I. -I../../../src/include -I../../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact   
-I/soft/readline/v4.2.1/include -c Lapack.c -o Lapack.lo
/usr/bin/f77 -fpe3   -g -c double.f -o double.lo
f90: Info: double.f, line 38563: This directive is not supported in this 
platform.
CDEC$          NOVECTOR
---------------^
/usr/bin/f77 -fpe3   -g -c cmplx.f -o cmplx.lo
/usr/bin/f77 -fpe3   -g -c cmplxblas.f -o cmplxblas.lo
/usr/bin/cc -shared -L/soft/readline/v4.2.1/lib -o lapack.so  Lapack.lo 
double.lo  cmplx.lo cmplxblas.lo   -L/soft/readline/v4.2.1/lib -lreadline 
-ltermcap -lm -lUfor -lfor -lFutil -lots -lm_c32 -lmld -lexc -lreadline 
-ltermcap -lm
ld:
Warning: Unresolved:
R_NaInt
Rf_error
R_alloc
R_NilValue
R_DimSymbol
R_NamesSymbol
Rf_coerceVector
Rf_allocMatrix
Rf_allocVector
Rf_asLogical
Rf_duplicate
Rf_getAttrib
Rf_isComplex
Rf_isMatrix
Rf_isString
Rf_mkChar
Rf_protect
Rf_setAttrib
Rf_unprotect
Rf_unprotect_ptr
LENGTH
R_CHAR
STRING_ELT
SET_STRING_ELT
VECTOR_ELT
SET_VECTOR_ELT
INTEGER
REAL
COMPLEX
R_setLapackRoutines
xerbla_
dswap_
dscal_
drot_
lsame_
idamax_
dgemm_
dcopy_
dnrm2_
dgemv_
dasum_
dtrmv_
daxpy_
ddot_
dger_
dtrmm_
dsymv_
dtrsv_
dsyr2_
dsyr2k_
gmake[5]: Entering directory `/soft/R/R-1.5.1/src/modules/lapack'
gmake[5]: Leaving directory `/soft/R/R-1.5.1/src/modules/lapack'
gmake[4]: Leaving directory `/soft/R/R-1.5.1/src/modules/lapack'
gmake[3]: Leaving directory `/soft/R/R-1.5.1/src/modules/lapack'
gmake[3]: Entering directory `/soft/R/R-1.5.1/src/modules/vfonts'
gmake[4]: Entering directory `/soft/R/R-1.5.1/src/modules/vfonts'
making g_alab_her.d from g_alab_her.c
making g_cntrlify.d from g_cntrlify.c
making g_fontdb.d from g_fontdb.c
making g_her_glyph.d from g_her_glyph.c
gmake[4]: Leaving directory `/soft/R/R-1.5.1/src/modules/vfonts'
gmake[4]: Entering directory `/soft/R/R-1.5.1/src/modules/vfonts'
/usr/bin/cc -I. -I../../../src/include -I../../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact   
-I/soft/readline/v4.2.1/include -c g_alab_her.c -o g_alab_her.lo
/usr/bin/cc -I. -I../../../src/include -I../../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact   
-I/soft/readline/v4.2.1/include -c g_cntrlify.c -o g_cntrlify.lo
/usr/bin/cc -I. -I../../../src/include -I../../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact   
-I/soft/readline/v4.2.1/include -c g_fontdb.c -o g_fontdb.lo
/usr/bin/cc -I. -I../../../src/include -I../../../src/include 
-I/soft/readline/v4.2.1/include -DHAVE_CONFIG_H -std1 -ieee_with_inexact   
-I/soft/readline/v4.2.1/include -c g_her_glyph.c -o g_her_glyph.lo
/usr/bin/cc -shared -L/soft/readline/v4.2.1/lib -o vfonts.so  g_alab_her.lo 
g_cntrlify.lo g_fontdb.lo g_her_glyph.lo  -lreadline -ltermcap -lm
ld:
Warning: Unresolved:
R_finite
vmaxget
vmaxset
Rf_GLine
Rf_GStrHeight
R_setVFontRoutines
Rf_GConvert
Rf_GConvertXUnits
Rf_GConvertYUnits
Rf_gpptr
R_alloc
gmake[5]: Entering directory `/soft/R/R-1.5.1/src/modules/vfonts'
gmake[5]: Leaving directory `/soft/R/R-1.5.1/src/modules/vfonts'
gmake[4]: Leaving directory `/soft/R/R-1.5.1/src/modules/vfonts'
gmake[3]: Leaving directory `/soft/R/R-1.5.1/src/modules/vfonts'
gmake[2]: Leaving directory `/soft/R/R-1.5.1/src/modules'
gmake[2]: Entering directory `/soft/R/R-1.5.1/src/library'
mkdir -p -- ../../library
gmake[3]: Entering directory `/soft/R/R-1.5.1/src/library/profile'
building system startup profile
mkdir -p -- ../../../library/base/R
gmake[3]: Leaving directory `/soft/R/R-1.5.1/src/library/profile'
gmake[3]: Entering directory `/soft/R/R-1.5.1/src/library/base'
building package 'base'
mkdir -p -- ../../../library/base/data
mkdir -p -- ../../../library/base/demo
mkdir -p -- ../../../library/base/man
gmake[3]: Leaving directory `/soft/R/R-1.5.1/src/library/base'
gmake[3]: Entering directory `/soft/R/R-1.5.1/src/library/ctest'
building package 'ctest'
mkdir -p -- ../../../library/ctest/R
mkdir -p -- ../../../library/ctest/man
gmake[4]: Entering directory `/soft/R/R-1.5.1/src/library/ctest/src'
making ansari.d from ansari.c
making chisqsim.d from chisqsim.c
making d2x2xk.d from d2x2xk.c
making fexact.d from fexact.c
making kendall.d from kendall.c
making ks.d from ks.c
making prho.d from prho.c
making swilk.d from swilk.c
making init.d from init.c
gmake[5]: Entering directory `/soft/R/R-1.5.1/src/library/ctest/src'
gmake[5]: `Makedeps' is up to date.
gmake[5]: Leaving directory `/soft/R/R-1.5.1/src/library/ctest/src'
gmake[5]: Entering directory `/soft/R/R-1.5.1/src/library/ctest/src'
/usr/bin/cc -I../../../../include  -I/soft/readline/v4.2.1/include -std1 
-ieee_with_inexact    -I/soft/readline/v4.2.1/include -c ansari.c -o ansari.o
/usr/bin/cc -I../../../../include  -I/soft/readline/v4.2.1/include -std1 
-ieee_with_inexact    -I/soft/readline/v4.2.1/include -c chisqsim.c -o 
chisqsim.o
/usr/bin/cc -I../../../../include  -I/soft/readline/v4.2.1/include -std1 
-ieee_with_inexact    -I/soft/readline/v4.2.1/include -c d2x2xk.c -o d2x2xk.o
/usr/bin/cc -I../../../../include  -I/soft/readline/v4.2.1/include -std1 
-ieee_with_inexact    -I/soft/readline/v4.2.1/include -c fexact.c -o fexact.o
/usr/bin/cc -I../../../../include  -I/soft/readline/v4.2.1/include -std1 
-ieee_with_inexact    -I/soft/readline/v4.2.1/include -c kendall.c -o 
kendall.o
/usr/bin/cc -I../../../../include  -I/soft/readline/v4.2.1/include -std1 
-ieee_with_inexact    -I/soft/readline/v4.2.1/include -c ks.c -o ks.o
/usr/bin/cc -I../../../../include  -I/soft/readline/v4.2.1/include -std1 
-ieee_with_inexact    -I/soft/readline/v4.2.1/include -c prho.c -o prho.o
/usr/bin/cc -I../../../../include  -I/soft/readline/v4.2.1/include -std1 
-ieee_with_inexact    -I/soft/readline/v4.2.1/include -c swilk.c -o swilk.o
/usr/bin/cc -I../../../../include  -I/soft/readline/v4.2.1/include -std1 
-ieee_with_inexact    -I/soft/readline/v4.2.1/include -c init.c -o init.o
/usr/bin/cc -shared -L/soft/readline/v4.2.1/lib -o ctest.so ansari.o 
chisqsim.o d2x2xk.o fexact.o kendall.o ks.o prho.o swilk.o init.o  
-L/soft/readline/v4.2.1/lib -lreadline -ltermcap -lm -lUfor -lfor -lFutil 
-lots -lm_c32 -lmld -lexc   
ld:
Warning: Unresolved:
Rf_error
R_alloc
Rf_choose
GetRNGstate
PutRNGstate
unif_rand
Rf_dhyper
Rf_imax2
Rf_imin2
R_isort
Rf_pgamma
Rf_fmax2
Rf_gammafn
Rf_sign
Rf_pnorm5
Rf_qnorm5
R_registerRoutines
mkdir -p -- ../../../../library/ctest/libs
gmake[5]: Leaving directory `/soft/R/R-1.5.1/src/library/ctest/src'
gmake[4]: Leaving directory `/soft/R/R-1.5.1/src/library/ctest/src'
gmake[3]: Leaving directory `/soft/R/R-1.5.1/src/library/ctest'
gmake[3]: Entering directory `/soft/R/R-1.5.1/src/library/eda'
building package 'eda'
mkdir -p -- ../../../library/eda/R
mkdir -p -- ../../../library/eda/demo
mkdir -p -- ../../../library/eda/man
gmake[4]: Entering directory `/soft/R/R-1.5.1/src/library/eda/src'
making init.d from init.c
making line.d from line.c
making smooth.d from smooth.c
gmake[5]: Entering directory `/soft/R/R-1.5.1/src/library/eda/src'
gmake[5]: `Makedeps' is up to date.
gmake[5]: Leaving directory `/soft/R/R-1.5.1/src/library/eda/src'
gmake[5]: Entering directory `/soft/R/R-1.5.1/src/library/eda/src'
/usr/bin/cc -I../../../../include  -I/soft/readline/v4.2.1/include -std1 
-ieee_with_inexact    -I/soft/readline/v4.2.1/include -c init.c -o init.o
/usr/bin/cc -I../../../../include  -I/soft/readline/v4.2.1/include -std1 
-ieee_with_inexact    -I/soft/readline/v4.2.1/include -c line.c -o line.o
/usr/bin/cc -I../../../../include  -I/soft/readline/v4.2.1/include -std1 
-ieee_with_inexact    -I/soft/readline/v4.2.1/include -c smooth.c -o smooth.o
/usr/bin/cc -shared -L/soft/readline/v4.2.1/lib -o eda.so init.o line.o 
smooth.o     
ld:
Warning: Unresolved:
R_rsort
ceil
floor
Rf_error
R_alloc
mkdir -p -- ../../../../library/eda/libs
gmake[5]: Leaving directory `/soft/R/R-1.5.1/src/library/eda/src'
gmake[4]: Leaving directory `/soft/R/R-1.5.1/src/library/eda/src'
gmake[3]: Leaving directory `/soft/R/R-1.5.1/src/library/eda'
gmake[3]: Entering directory `/soft/R/R-1.5.1/src/library/lqs'
building package 'lqs'
mkdir -p -- ../../../library/lqs/R
mkdir -p -- ../../../library/lqs/man
gmake[4]: Entering directory `/soft/R/R-1.5.1/src/library/lqs/src'
making lqs.d from lqs.c
gmake[5]: Entering directory `/soft/R/R-1.5.1/src/library/lqs/src'
gmake[5]: `Makedeps' is up to date.
gmake[5]: Leaving directory `/soft/R/R-1.5.1/src/library/lqs/src'
gmake[5]: Entering directory `/soft/R/R-1.5.1/src/library/lqs/src'
/usr/bin/cc -I../../../../include  -I/soft/readline/v4.2.1/include -std1 
-ieee_with_inexact    -I/soft/readline/v4.2.1/include -c lqs.c -o lqs.o
/usr/bin/cc -shared -L/soft/readline/v4.2.1/lib -o lqs.so lqs.o     
ld:
Warning: Unresolved:
fabs
log
sqrt
R_alloc
GetRNGstate
PutRNGstate
unif_rand
R_rsort
Rf_rPsort
dqrdc2_
dqrsl_
R_registerRoutines
mkdir -p -- ../../../../library/lqs/libs
gmake[5]: Leaving directory `/soft/R/R-1.5.1/src/library/lqs/src'
gmake[4]: Leaving directory `/soft/R/R-1.5.1/src/library/lqs/src'
gmake[3]: Leaving directory `/soft/R/R-1.5.1/src/library/lqs'
gmake[3]: Entering directory `/soft/R/R-1.5.1/src/library/methods'
building package 'methods'
mkdir -p -- ../../../library/methods/R
mkdir -p -- ../../../library/methods/man
gmake[4]: Entering directory `/soft/R/R-1.5.1/src/library/methods/src'
making do_substitute_direct.d from do_substitute_direct.c
making methods_list_dispatch.d from methods_list_dispatch.c
making method_meta_data.d from method_meta_data.c
making slot.d from slot.c
gmake[5]: Entering directory `/soft/R/R-1.5.1/src/library/methods/src'
gmake[5]: `Makedeps' is up to date.
gmake[5]: Leaving directory `/soft/R/R-1.5.1/src/library/methods/src'
gmake[5]: Entering directory `/soft/R/R-1.5.1/src/library/methods/src'
/usr/bin/cc -I../../../../include  -I/soft/readline/v4.2.1/include -std1 
-ieee_with_inexact    -I/soft/readline/v4.2.1/include -c 
do_substitute_direct.c -o do_substitute_direct.o
/usr/bin/cc -I../../../../include  -I/soft/readline/v4.2.1/include -std1 
-ieee_with_inexact    -I/soft/readline/v4.2.1/include -c 
methods_list_dispatch.c -o methods_list_dispatch.o
/usr/bin/cc -I../../../../include  -I/soft/readline/v4.2.1/include -std1 
-ieee_with_inexact    -I/soft/readline/v4.2.1/include -c method_meta_data.c 
-o method_meta_data.o
/usr/bin/cc -I../../../../include  -I/soft/readline/v4.2.1/include -std1 
-ieee_with_inexact    -I/soft/readline/v4.2.1/include -c slot.c -o slot.o
/usr/bin/cc -shared -L/soft/readline/v4.2.1/lib -o methods.so 
do_substitute_direct.o methods_list_dispatch.o method_meta_data.o slot.o     
ld:
Warning: Unresolved:
Rf_error
R_NilValue
Rf_VectorToPairList
Rf_duplicate
Rf_protect
Rf_substitute
Rf_unprotect
TYPEOF
Rf_NewEnvironment
R_GlobalEnv
R_UnboundValue
R_MissingArg
R_DotsSymbol
R_NamesSymbol
Rf_allocVector
Rf_asChar
Rf_asLogical
Rf_defineVar
Rf_eval
Rf_findVar
Rf_findVarInFrame
Rf_findFun
Rf_getAttrib
Rf_install
Rf_isEnvironment
Rf_isFunction
Rf_isNull
Rf_isObject
Rf_isPrimitive
Rf_isSymbol
Rf_length
Rf_mkChar
ATTRIB
R_CHAR
STRING_ELT
SET_STRING_ELT
VECTOR_ELT
LOGICAL
INTEGER
TAG
CAR
CDR
MISSING
SETCAR
BODY
CLOENV
PRINTNAME
SYMVALUE
DDVAL
FRAME
ENCLOS
Rf_type2str
R_PreserveObject
R_set_standardGeneric_ptr
R_data_class
R_deferred_default_method
R_set_prim_method
do_set_prim_method
R_set_quick_method_check
R_do_slot
R_do_slot_assign
mkdir -p -- ../../../../library/methods/libs
gmake[5]: Leaving directory `/soft/R/R-1.5.1/src/library/methods/src'
gmake[4]: Leaving directory `/soft/R/R-1.5.1/src/library/methods/src'
gmake[4]: Entering directory `/soft/R/R-1.5.1/src/library/methods'
dumping R code in package 'methods'
initializing class and method definitions now ...done

gmake[4]: Leaving directory `/soft/R/R-1.5.1/src/library/methods'
gmake[3]: Leaving directory `/soft/R/R-1.5.1/src/library/methods'
gmake[3]: Entering directory `/soft/R/R-1.5.1/src/library/modreg'
building package 'modreg'
mkdir -p -- ../../../library/modreg/R
mkdir -p -- ../../../library/modreg/data
mkdir -p -- ../../../library/modreg/man
gmake[4]: Entering directory `/soft/R/R-1.5.1/src/library/modreg/src'
making init.d from init.c
making ksmooth.d from ksmooth.c
making loessc.d from loessc.c
gmake[5]: Entering directory `/soft/R/R-1.5.1/src/library/modreg/src'
gmake[5]: `Makedeps' is up to date.
gmake[5]: Leaving directory `/soft/R/R-1.5.1/src/library/modreg/src'
gmake[5]: Entering directory `/soft/R/R-1.5.1/src/library/modreg/src'
/usr/bin/cc -I../../../../include  -I/soft/readline/v4.2.1/include -std1 
-ieee_with_inexact    -I/soft/readline/v4.2.1/include -c init.c -o init.o
/usr/bin/cc -I../../../../include  -I/soft/readline/v4.2.1/include -std1 
-ieee_with_inexact    -I/soft/readline/v4.2.1/include -c ksmooth.c -o 
ksmooth.o
/usr/bin/cc -I../../../../include  -I/soft/readline/v4.2.1/include -std1 
-ieee_with_inexact    -I/soft/readline/v4.2.1/include -c loessc.c -o loessc.o
/usr/bin/f77 -fpe3    -g -c bsplvd.f -o bsplvd.o
/usr/bin/f77 -fpe3    -g -c bvalue.f -o bvalue.o
/usr/bin/f77 -fpe3    -g -c bvalus.f -o bvalus.o
/usr/bin/f77 -fpe3    -g -c loessf.f -o loessf.o
/usr/bin/f77 -fpe3    -g -c ppr.f -o ppr.o
/usr/bin/f77 -fpe3    -g -c qsbart.f -o qsbart.o
/usr/bin/cc -I../../../../include  -I/soft/readline/v4.2.1/include -std1 
-ieee_with_inexact    -I/soft/readline/v4.2.1/include -c sbart.c -o sbart.o
/usr/bin/f77 -fpe3    -g -c sgram.f -o sgram.o
/usr/bin/f77 -fpe3    -g -c sinerp.f -o sinerp.o
/usr/bin/f77 -fpe3    -g -c sslvrg.f -o sslvrg.o
/usr/bin/f77 -fpe3    -g -c stxwx.f -o stxwx.o
/usr/bin/cc -shared -L/soft/readline/v4.2.1/lib -o modreg.so init.o ksmooth.o 
loessc.o bsplvd.o bvalue.o bvalus.o loessf.o ppr.o qsbart.o sbart.o sgram.o 
sinerp.o sslvrg.o stxwx.o -L/soft/readline/v4.2.1/lib -lreadline -ltermcap 
-lm -lUfor -lfor -lFutil -lots -lm_c32 -lmld -lexc   
ld:
Warning: Unresolved:
R_registerRoutines
R_NaReal
Rf_error
Rf_warning
R_alloc
R_chk_calloc
R_chk_free
rwarn_
interv_
d1mach_
dsvdc_
dqrsl_
dqrdc_
ddot_
idamax_
dnrm2_
dblepr_
intpr_
R_finite
Rprintf
REprintf
R_pow
Rf_fsign
dpbsl_
dpbfa_
mkdir -p -- ../../../../library/modreg/libs
gmake[5]: Leaving directory `/soft/R/R-1.5.1/src/library/modreg/src'
gmake[4]: Leaving directory `/soft/R/R-1.5.1/src/library/modreg/src'
gmake[3]: Leaving directory `/soft/R/R-1.5.1/src/library/modreg'
gmake[3]: Entering directory `/soft/R/R-1.5.1/src/library/mva'
building package 'mva'
mkdir -p -- ../../../library/mva/R
mkdir -p -- ../../../library/mva/data
mkdir -p -- ../../../library/mva/man
gmake[4]: Entering directory `/soft/R/R-1.5.1/src/library/mva/src'
making dblcen.d from dblcen.c
making distance.d from distance.c
making hclust-utils.d from hclust-utils.c
making init.d from init.c
gmake[5]: Entering directory `/soft/R/R-1.5.1/src/library/mva/src'
gmake[5]: `Makedeps' is up to date.
gmake[5]: Leaving directory `/soft/R/R-1.5.1/src/library/mva/src'
gmake[5]: Entering directory `/soft/R/R-1.5.1/src/library/mva/src'
/usr/bin/cc -I../../../../include  -I/soft/readline/v4.2.1/include -std1 
-ieee_with_inexact    -I/soft/readline/v4.2.1/include -c dblcen.c -o dblcen.o
/usr/bin/cc -I../../../../include  -I/soft/readline/v4.2.1/include -std1 
-ieee_with_inexact    -I/soft/readline/v4.2.1/include -c distance.c -o 
distance.o
/usr/bin/cc -I../../../../include  -I/soft/readline/v4.2.1/include -std1 
-ieee_with_inexact    -I/soft/readline/v4.2.1/include -c hclust-utils.c -o 
hclust-utils.o
/usr/bin/cc -I../../../../include  -I/soft/readline/v4.2.1/include -std1 
-ieee_with_inexact    -I/soft/readline/v4.2.1/include -c init.c -o init.o
/usr/bin/f77 -fpe3    -g -c hclust.f -o hclust.o
/usr/bin/f77 -fpe3    -g -c kmns.f -o kmns.o
/usr/bin/cc -shared -L/soft/readline/v4.2.1/lib -o mva.so dblcen.o distance.o 
hclust-utils.o init.o hclust.o kmns.o -L/soft/readline/v4.2.1/lib -lreadline 
-ltermcap -lm -lUfor -lfor -lFutil -lots -lm_c32 -lmld -lexc   
ld:
Warning: Unresolved:
R_NaReal
R_finite
Rf_error
machar
R_alloc
Rf_coerceVector
Rf_allocMatrix
Rf_nrows
Rf_protect
Rf_unprotect
LENGTH
INTEGER
R_registerRoutines
mkdir -p -- ../../../../library/mva/libs
gmake[5]: Leaving directory `/soft/R/R-1.5.1/src/library/mva/src'
gmake[4]: Leaving directory `/soft/R/R-1.5.1/src/library/mva/src'
gmake[3]: Leaving directory `/soft/R/R-1.5.1/src/library/mva'
gmake[3]: Entering directory `/soft/R/R-1.5.1/src/library/nls'
building package 'nls'
mkdir -p -- ../../../library/nls/R
mkdir -p -- ../../../library/nls/data
mkdir -p -- ../../../library/nls/man
gmake[4]: Entering directory `/soft/R/R-1.5.1/src/library/nls/src'
making nls.d from nls.c
gmake[5]: Entering directory `/soft/R/R-1.5.1/src/library/nls/src'
gmake[5]: `Makedeps' is up to date.
gmake[5]: Leaving directory `/soft/R/R-1.5.1/src/library/nls/src'
gmake[5]: Entering directory `/soft/R/R-1.5.1/src/library/nls/src'
/usr/bin/cc -I../../../../include  -I/soft/readline/v4.2.1/include -std1 
-ieee_with_inexact    -I/soft/readline/v4.2.1/include -c nls.c -o nls.o
/usr/bin/cc -shared -L/soft/readline/v4.2.1/lib -o nls.so nls.o     
ld:
Warning: Unresolved:
fabs
sqrt
R_finite
Rf_error
R_GlobalEnv
R_NamesSymbol
Rf_coerceVector
Rf_allocMatrix
Rf_allocVector
Rf_asInteger
Rf_asLogical
Rf_asReal
Rf_eval
Rf_findVar
Rf_getAttrib
Rf_install
Rf_isEnvironment
Rf_isFunction
Rf_isNewList
Rf_isNumeric
Rf_isReal
Rf_isString
Rf_lang1
Rf_lang2
Rf_protect
Rf_setAttrib
Rf_unprotect
LENGTH
R_CHAR
STRING_ELT
VECTOR_ELT
SET_VECTOR_ELT
REAL
R_registerRoutines
mkdir -p -- ../../../../library/nls/libs
gmake[5]: Leaving directory `/soft/R/R-1.5.1/src/library/nls/src'
gmake[4]: Leaving directory `/soft/R/R-1.5.1/src/library/nls/src'
gmake[3]: Leaving directory `/soft/R/R-1.5.1/src/library/nls'
gmake[3]: Entering directory `/soft/R/R-1.5.1/src/library/splines'
building package 'splines'
mkdir -p -- ../../../library/splines/R
mkdir -p -- ../../../library/splines/man
gmake[4]: Entering directory `/soft/R/R-1.5.1/src/library/splines/src'
making splines.d from splines.c
gmake[5]: Entering directory `/soft/R/R-1.5.1/src/library/splines/src'
gmake[5]: `Makedeps' is up to date.
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/usr/bin/cc -I../../../../include  -I/soft/readline/v4.2.1/include -std1 
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/usr/bin/cc -I../../../../include  -I/soft/readline/v4.2.1/include -std1 
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 >>> Building/Updating help pages for package `ctest'
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 >>> Building/Updating help pages for package `eda'
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 >>> Building/Updating help pages for package `lqs'
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 >>> Building/Updating help pages for package `methods'
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 >>> Building/Updating help pages for package `modreg'
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 >>> Building/Updating help pages for package `mva'
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 >>> Building/Updating help pages for package `nls'
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 >>> Building/Updating help pages for package `splines'
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 >>> Building/Updating help pages for package `stepfun'
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 >>> Building/Updating help pages for package `tcltk'
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 >>> Building/Updating help pages for package `tools'
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<   -4 0.000-0.500i 1+0i 0.000+2.000i -4+0i -0.000-8.000i  16+-0i
<   -3 0.000-0.577i 1+0i 0.000+1.732i -3+0i -0.000-5.196i   9+-0i
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>   -3 0.000-0.577i 1+0i 0.000+1.732i -3+0i  0.000-5.196i   9+0i
>   -2 0.000-0.707i 1+0i 0.000+1.414i -2+0i  0.000-2.828i   4+0i
>   -1 0.000-1.000i 1+0i 0.000+1.000i -1+0i  0.000-1.000i   1+0i53c53
< [1] -0.0720852+0.6383267i -0.6058296+-0.0000000i -0.0720852-0.6383267i
---> [1] -0.0720852+0.6383267i -0.6058296+0.0000000i -0.0720852-0.6383267i122c122
< n= 30 : 465+0i -15+142.7155i -15+70.56945i -15+46.16525i -15+33.69055i 
-15+25.98076i -15+20.64573i -15+16.65919i -15+13.50606i -15+10.89814i 
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-15-33.69055i -15-46.16525i -15-70.56945i -15-142.7155i 
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--please do not edit the information below--

Version:
 platform = alphaev56-dec-osf5.1
 arch = alphaev56
 os = osf5.1
 system = alphaev56, osf5.1
 status = 
 major = 1
 minor = 5.1
 year = 2002
 month = 06
 day = 17
 language = R

Search Path:
 .GlobalEnv, package:ctest, Autoloads, package:base

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Peter Dalgaard BSA

2002-Jul-12 11:00 UTC

head link

dyn.load tcl/tk (PR#1774)

joeckel@mpch-mainz.mpg.de writes:
> <<insert bug report here>>
> ------------------------------------------------------
> Error:
Perhaps some mental preprocessing could have been applied? These seem
to be the relevant bits of your 3850 line mail:
 > R : Copyright 2002, The R Development Core Team
> Version 1.5.1  (2002-06-17)
....> > require(tcltk) || stop("tcltk support is absent")
> Loading required package: tcltk
> Error in dyn.load(x, as.logical(local), as.logical(now)) :
>         unable to load shared library 
> "/soft/R/v1.5.1/lib/R/library/tcltk/libs/tcltk.so":
>   dlopen: /soft/R/v1.5.1/lib/R/library/tcltk/libs/tcltk.so: symbol 
> "Tcl_GetDoubleFromObj" unresolved
...> setenv TCLTK_LIBS "-L/soft/tcl/v8.3.4/lib"
> setenv TCLTK_CPPFLAGS "-I/soft/tcl/v8.3.4/include"
...> ./configure --prefix=/soft/R/v1.5.1 
> --with-tcl-config=/soft/tcl/v8.3.4/lib/tclConfig.sh 
> --with-tk-config=/soft/tcl/v8.3.4/lib/tkConfig.sh >&! config.out
.....> /usr/bin/cc -shared -L/soft/readline/v4.2.1/lib -o tcltk.so tcltk.o  
> -L/soft/tcl/v8.3.4/lib -lm   
> ld:
> Warning: Unresolved:
> TclFreeObj
> Tcl_GetDoubleFromObj
> Tcl_GetIntFromObj
> Tcl_GetStringFromObj
> Tcl_ListObjAppendElement
..... > 
> --please do not edit the information below--
> 
> Version:
>  platform = alphaev56-dec-osf5.1
>  arch = alphaev56
>  os = osf5.1
>  system = alphaev56, osf5.1
>  status = 
>  major = 1
>  minor = 5.1
>  year = 2002
>  month = 06
>  day = 17
>  language = R
> 
> Search Path:
>  .GlobalEnv, package:ctest, Autoloads, package:base
> 
As far as I can see, you never actually link against the tcl/tk
libraries (-ltcl -ltk) so you'd need more stuff in TCLTK_LIBS. Or
maybe simply *not* set it and let configure work it out.

-- 
   O__  ---- Peter Dalgaard             Blegdamsvej 3  
  c/ /'_ --- Dept. of Biostatistics     2200 Cph. N   
 (*) \(*) -- University of Copenhagen   Denmark      Ph: (+45) 35327918
~~~~~~~~~~ - (p.dalgaard@biostat.ku.dk)             FAX: (+45) 35327907
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