search for: cblas_cdotu_sub

...eds -D__NO_MATH_INLINES... no checking for library containing connect... none required checking for library containing gethostbyname... none required checking for library containing xdr_string... none required checking for __setfpucw... no checking whether mktime sets errno... no checking for cblas_cdotu_sub in vecLib framework... no checking for CFStringGetSystemEncoding in CoreFoundation framework... no checking for tclConfig.sh... no checking for tclConfig.sh in library (sub)directories... /usr/lib/tcl8.5/tclConfig.sh checking for tkConfig.sh... no checking for tkConfig.sh in library (sub)director...

...H EL head node of a cluster. The configure process seems to have problems when it checks for dgemm in the BLAS. I'm using configure as: ./configure CC=icc F77=ifort --with-lapack="$MKL" --with-blas="$MKL" where $MKL is defined as in R-admin section A.3.1.4. checking for cblas_cdotu_sub in vecLib framework... no checking for dgemm_ in -L/usr1/util/Intel/mkl/10.0.1.014/lib/em64t -Wl,--start-group /usr1/util/Intel/mkl/10.0.1.014/lib/em64t/libmkl_gf_lp64.a /usr...

...ot;-L/usr/local/atlas/lib -latlas -lf77blas" --with-lapack="-L/usr/local/atlas/lib -llapack -lcblas" CFLAGS='-O3 -pipe -march=native' CXXFLAGS='-O3 -pipe -march=native' R_PAPERSIZE='letter' The configuration routine returns the following errors: checking for cblas_cdotu_sub in vecLib framework... no checking for dgemm_ in -L/usr/local/atlas/lib -latlas -lf77blas... no checking for dgemm_... no checking for ATL_xerbla in -latlas... no checking for dgemm_ in -lblas... no checking for dgemm_ in -lblas... (cached) no checking for dgemm_ in -lblas... (cached) no Looking a...

...l take precedence configure: WARNING: ## ----------------------------------- ## configure: WARNING: ## Report this to r-bugs at R-project.org ## configure: WARNING: ## ----------------------------------- ## checking for complex.h... yes checking for double complex... no no checking for cblas_cdotu_sub in vecLib framework... no .... R is now configured for x86_64-unknown-linux-gnu Source directory: ../../src/R-2.3.0-patched Installation directory: /usr/local C compiler: pgcc -g -O2 -Kieee Fortran 77 compiler: pgf77 -g -O2 -Kieee C++ compiler:...

...sts' make: *** [check] Error 2 I don't really *know* if the configure results are "clean". Here is a subset of the configure results (that may be suspect) : checking build system type... i686-pc-linux-gnu checking host system type... i686-pc-linux-gnu . . . checking for cblas_cdotu_sub in vecLib framework... no checking iconv.h usability... yes checking iconv.h presence... yes checking for iconv.h... yes checking for iconv... yes checking whether iconv() accepts "UTF-8", "latin1" and "UCS-*"... yes checking for iconvlist... no . . . checking...

.../lib/tcl8.4/tclConfig.sh --enable-threads=posix --with-blas > > checking build system type... x86_64-unknown-linux-gnu > checking host system type... x86_64-unknown-linux-gnu > > checking whether C99 double complex is compatible with Rcomplex... yes > yes > checking for cblas_cdotu_sub in vecLib framework... no > checking for dgemm_... no > checking for ATL_xerbla in -latlas... no > checking for dgemm_ in -lblas... yes > checking for dgemm_ in -ldgemm... no > checking for dgemm_ in -lblas... (cached) yes > checking for dgemm_ in -lessl... no > checking...

...declared... yes checking whether casin exists and is declared... yes checking whether catan exists and is declared... yes checking whether ccosh exists and is declared... yes checking whether csinh exists and is declared... yes checking whether ctanh exists and is declared... yes checking for cblas_cdotu_sub in vecLib framework... no checking iconv.h usability... yes checking iconv.h presence... yes checking for iconv.h... yes checking for iconv... no checking for iconvlist... no checking for iconv... no, consider installing GNU libiconv checking wchar.h usability... yes checking wchar.h presen...

...es checking for casin... yes checking for catan... yes checking for ccosh... yes checking for csinh... yes checking for ctanh... yes checking for cacosh... yes checking for casinh... yes checking for catanh... yes checking whether C99 double complex is compatible with Rcomplex... no no checking for cblas_cdotu_sub in vecLib framework... no checking for dgemm_... no checking for ATL_xerbla in -latlas... no checking for dgemm_ in -lblas... no checking for dgemm_ in -lsunperf... no checking for dgemm_ in -lblas... (cached) no checking for dgemm_ in -lblas... (cached) no checking wchar.h usability... yes checkin...

...cking whether ctanh exists and is declared... yes checking whether cacosh exists and is declared... yes checking whether casinh exists and is declared... yes checking whether catanh exists and is declared... yes checking whether C99 double complex is compatible with Rcomplex... yes yes checking for cblas_cdotu_sub in vecLib framework... no checking iconv.h usability... yes checking iconv.h presence... yes checking for iconv.h... yes checking for iconv... yes checking whether iconv accepts "UTF-8", "latin1" and "UCS-*"... yes checking for iconvlist... no checking wchar.h usabilit...

...l take precedence configure: WARNING: ## ----------------------------------- ## configure: WARNING: ## Report this to r-bugs at R-project.org ## configure: WARNING: ## ----------------------------------- ## checking for complex.h... yes checking for double complex... no no checking for cblas_cdotu_sub in vecLib framework... no checking for dgemm_... no checking for ATL_xerbla in -latlas... no checking for dgemm_ in -lblas... yes checking for dgemm_ in -ldgemm... no checking for dgemm_ in -lsunperf... no checking for dgemm_ in -lblas... (cached) yes checking for dgemm_ in -lessl... no checking fo...

...nd is declared... yes checking whether casin exists and is declared... yes checking whether catan exists and is declared... yes checking whether ccosh exists and is declared... yes checking whether csinh exists and is declared... yes checking whether ctanh exists and is declared... yes checking for cblas_cdotu_sub in vecLib framework... no checking for dgemm_ in -L/usr/lib/blas/reference -lblas ... yes checking whether double complex BLAS can be used... yes checking whether the BLAS is complete... yes checking iconv.h usability... yes checking iconv.h presence... yes checking for iconv.h... yes checking for...

...cking whether ctanh exists and is declared... yes checking whether cacosh exists and is declared... yes checking whether casinh exists and is declared... yes checking whether catanh exists and is declared... yes checking whether C99 double complex is compatible with Rcomplex... yes yes checking for cblas_cdotu_sub in vecLib framework... -framework vecLib checking for dgemm_ in -framework vecLib... yes checking whether double complex BLAS can be used... no checking whether the BLAS is complete... yes checking iconv.h usability... yes checking iconv.h presence... yes checking for iconv.h... yes checking for ic...

...cking whether ctanh exists and is declared... yes checking whether cacosh exists and is declared... yes checking whether casinh exists and is declared... yes checking whether catanh exists and is declared... yes checking whether C99 double complex is compatible with Rcomplex... yes yes checking for cblas_cdotu_sub in vecLib framework... -framework vecLib checking for dgemm_ in -framework vecLib... yes checking whether double complex BLAS can be used... no checking whether the BLAS is complete... yes checking iconv.h usability... yes checking iconv.h presence... yes checking for iconv.h... yes checking for ic...