denny at crosstab.com
2006-Jun-22 23:58 UTC
[Rd] Error - Compiling R on a Sun V40Z - R/R-2.2.1 (PR#9024)
configure: WARNING: dlfcn.h: present but cannot be compiled configure: WARNING: dlfcn.h: check for missing prerequisite headers? configure: WARNING: dlfcn.h: see the Autoconf documentation configure: WARNING: dlfcn.h: section "Present But Cannot Be Compiled" configure: WARNING: dlfcn.h: proceeding with the preprocessor's result configure: WARNING: dlfcn.h: in the future, the compiler will take precedence configure: WARNING: ## ----------------------------------- ## configure: WARNING: ## Report this to r-bugs at R-project.org ## configure: WARNING: ## ----------------------------------- ## checking for dlfcn.h... yes -------------------------------------------------------------------------------------------------------------------------- LANG=C LD_LIBRARY_PATH=/usr/sfw/lib:/usr/lib:/usr/local/lib:/usr/local/BerkeleyDB.4.4/lib LIVE_BIN_DIR=/dbdev/bin/:/dbdev/3.0.0/ LIVE_DIR=/dbdev LOGNAME=denny MAIL=/var/mail//denny MANPATH=/usr/sfw/man:/opt/sfw/pgsql/man::/usr/share/man:/usr/local/man NAMS_LOGINS=/dbdev/logins OPT_BIN_DIR=/usr/local/bin:/usr/sfw/bin OPT_MAN_DIR=/usr/sfw/man:/opt/sfw/pgsql/man PATH=/usr/ccs/bin:.:/dbdev/bin/:/dbdev/3.0.0/:/usr/local/bin:/usr/sfw/bin:/usr/bin:/opt/sfw/bin:/opt/sfw/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/usr/local/pgsql/bin -------------------------------------------------------------------------------------------------------------------------- $ cat ./z ./configure --with-readline=no --without-recommended-packages $ . ./z checking build system type... i386-pc-solaris2.10 checking host system type... i386-pc-solaris2.10 loading site script './config.site' loading build specific script './config.site' checking for pwd... /usr/bin/pwd checking whether builddir is srcdir... yes checking for working aclocal... missing checking for working autoconf... missing checking for working automake... missing checking for working autoheader... missing checking for working makeinfo... found checking for gawk... no checking for mawk... no checking for nawk... nawk checking for egrep... egrep checking whether ln -s works... yes checking for ranlib... ranlib checking for bison... bison -y checking for ar... ar checking for a BSD-compatible install... tools/install-sh -c checking for sed... /usr/xpg4/bin/sed checking for less... /usr/bin/less checking for perl... /usr/local/bin/perl checking whether perl version is at least 5.004... yes checking for dvips... no checking for tex... no checking for latex... no configure: WARNING: you cannot build DVI versions of the R manuals checking for makeindex... no checking for pdftex... no checking for pdflatex... no configure: WARNING: you cannot build PDF versions of the R manuals checking for makeinfo... /usr/sfw/bin/makeinfo checking for unzip... /usr/bin/unzip checking for zip... /usr/bin/zip checking for gzip... /dbdev/bin//gzip checking for firefox... no checking for mozilla... /usr/sfw/bin/mozilla using default browser ... /usr/sfw/bin/mozilla checking for acroread... no checking for acroread4... no checking for xpdf... no checking for gv... no checking for gnome-gv... no checking for ggv... /usr/bin/ggv checking for gcc... gcc checking for C compiler default output file name... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... checking whether we are using the GNU C compiler... no checking whether gcc accepts -g... no checking for gcc option to accept ANSI C... none needed checking how to run the C preprocessor... gcc -E checking how to run the C preprocessor... gcc -E checking for f95... no checking for fort... no checking for xlf95... no checking for ifort... no checking for ifc... no checking for efc... no checking for pgf95... no checking for lf95... no checking for gfortran... no checking for ftn... no checking for g95... no checking for f90... no checking for xlf90... no checking for pgf90... no checking for pghpf... no checking for epcf90... no checking for g77... g77 checking whether we are using the GNU Fortran 77 compiler... no checking whether g77 accepts -g... no checking for g++... g++ checking whether we are using the GNU C++ compiler... no checking whether g++ accepts -g... no checking how to run the C++ preprocessor... g++ -E checking for a sed that does not truncate output... /usr/bin/sed checking for non-GNU ld... /usr/ccs/bin/ld checking if the linker (/usr/ccs/bin/ld) is GNU ld... no checking for /usr/ccs/bin/ld option to reload object files... -r checking for BSD-compatible nm... /usr/ccs/bin/nm -p checking how to recognise dependent libraries... pass_all checking for ANSI C header files... no checking for sys/types.h... no checking for sys/stat.h... no checking for stdlib.h... no checking for string.h... no checking for memory.h... no checking for strings.h... no checking for inttypes.h... no checking for stdint.h... no checking for unistd.h... no checking dlfcn.h usability... no checking dlfcn.h presence... yes configure: WARNING: dlfcn.h: present but cannot be compiled configure: WARNING: dlfcn.h: check for missing prerequisite headers? configure: WARNING: dlfcn.h: see the Autoconf documentation configure: WARNING: dlfcn.h: section "Present But Cannot Be Compiled" configure: WARNING: dlfcn.h: proceeding with the preprocessor's result configure: WARNING: dlfcn.h: in the future, the compiler will take precedence configure: WARNING: ## ----------------------------------- ## configure: WARNING: ## Report this to r-bugs at R-project.org ## configure: WARNING: ## ----------------------------------- ## checking for dlfcn.h... yes checking the maximum length of command line arguments... 262144 checking command to parse /usr/ccs/bin/nm -p output from gcc object... failed checking for objdir... .libs checking for ranlib... (cached) ranlib checking for strip... strip checking if gcc static flag works... yes checking for gcc option to produce PIC... -KPIC checking if gcc PIC flag -KPIC works... no checking if gcc supports -c -o file.o... yes checking whether the gcc linker (/usr/ccs/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... solaris2.10 ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... no checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no configure: creating libtool appending configuration tag "CXX" to libtool checking whether the g++ linker (/usr/ccs/bin/ld) supports shared libraries... yes checking for g++ option to produce PIC... checking if g++ supports -c -o file.o... yes checking whether the g++ linker (/usr/ccs/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... solaris2.10 ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... no appending configuration tag "F77" to libtool checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for g77 option to produce PIC... -KPIC checking if g77 PIC flag -KPIC works... no checking if g77 supports -c -o file.o... yes checking whether the g77 linker (/usr/ccs/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... solaris2.10 ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... no checking whether makeinfo version is at least 4.7... yes checking for cos in -lm... yes checking for sin in -lm... yes checking for dlopen in -ldl... yes checking for ANSI C header files... (cached) no checking whether time.h and sys/time.h may both be included... yes checking for dirent.h that defines DIR... yes checking for library containing opendir... none required checking for sys/wait.h that is POSIX.1 compatible... yes checking arpa/inet.h usability... yes checking arpa/inet.h presence... yes checking for arpa/inet.h... yes checking dl.h usability... no checking dl.h presence... no checking for dl.h... no checking for dlfcn.h... (cached) yes checking elf.h usability... yes checking elf.h presence... yes checking for elf.h... yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking floatingpoint.h usability... yes checking floatingpoint.h presence... yes checking for floatingpoint.h... yes checking fpu_control.h usability... no checking fpu_control.h presence... no checking for fpu_control.h... no checking grp.h usability... yes checking grp.h presence... yes checking for grp.h... yes checking ieee754.h usability... no checking ieee754.h presence... no checking for ieee754.h... no checking ieeefp.h usability... yes checking ieeefp.h presence... yes checking for ieeefp.h... yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking locale.h usability... yes checking locale.h presence... yes checking for locale.h... yes checking netdb.h usability... yes checking netdb.h presence... yes checking for netdb.h... yes checking netinet/in.h usability... yes checking netinet/in.h presence... yes checking for netinet/in.h... yes checking pwd.h usability... yes checking pwd.h presence... yes checking for pwd.h... yes checking for strings.h... (cached) no checking sys/param.h usability... yes checking sys/param.h presence... yes checking for sys/param.h... yes checking sys/select.h usability... yes checking sys/select.h presence... yes checking for sys/select.h... yes checking sys/socket.h usability... yes checking sys/socket.h presence... yes checking for sys/socket.h... yes checking for sys/stat.h... (cached) no checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking sys/times.h usability... yes checking sys/times.h presence... yes checking for sys/times.h... yes checking sys/utsname.h usability... yes checking sys/utsname.h presence... yes checking for sys/utsname.h... yes checking for unistd.h... (cached) no checking errno.h usability... yes checking errno.h presence... yes checking for errno.h... yes checking stdarg.h usability... yes checking stdarg.h presence... yes checking for stdarg.h... yes checking for string.h... (cached) no checking whether setjmp.h is POSIX.1 compatible... yes checking for GNU C library with version >= 2... no checking return type of signal handlers... void checking for pid_t... no checking for size_t... yes checking whether SIZE_MAX is declared... yes checking for blkcnt_t... no checking for type of socket length... socklen_t * checking whether byte ordering is bigendian... no checking for an ANSI C-conforming const... yes checking for inline... inline checking for int... yes checking size of int... 4 checking for long... yes checking size of long... 4 checking for long long... yes checking size of long long... 8 checking for long double... yes checking size of long double... 12 checking whether we can compute C Make dependencies... yes, using gcc -M checking whether gcc supports -c -o FILE.lo... yes checking how to get verbose linking output from g77... -v checking for Fortran libraries of g77... -L/usr/ccs/lib -L/usr/lib -L/usr/local/lib -L/dska/local/bin/../lib/gcc-lib/i386-pc-solaris2.10/3.3.6 -L/dska/local/bin/../lib/gcc-lib -L/usr/local/lib/gcc-lib/i386-pc-solaris2.10/3.3.6 -L/usr/ccs/bin -L/dska/local/bin/../lib/gcc-lib/i386-pc-solaris2.10/3.3.6/../../.. -L/usr/local/lib/gcc-lib/i386-pc-solaris2.10/3.3.6/../../.. -lfrtbegin -lg2c -lm -lgcc_s checking how to get verbose linking output from gcc... -v checking for C libraries of gcc... -L/usr/ccs/lib -L/usr/lib -L/usr/local/lib -L/dska/local/bin/../lib/gcc-lib/i386-pc-solaris2.10/3.3.6 -L/dska/local/bin/../lib/gcc-lib -L/usr/local/lib/gcc-lib/i386-pc-solaris2.10/3.3.6 -L/usr/ccs/bin -L/dska/local/bin/../lib/gcc-lib/i386-pc-solaris2.10/3.3.6/../../.. -L/usr/local/lib/gcc-lib/i386-pc-solaris2.10/3.3.6/../../.. -lgcc_eh checking for dummy main to link with Fortran libraries... none checking for Fortran name-mangling scheme... lower case, underscore, extra underscore checking whether g77 appends underscores to external names... yes checking whether mixed C/Fortran code can be run... yes checking whether g77 and gcc agree on int and double... yes checking whether g77 and gcc agree on double complex... yes checking whether g77 supports -c -o FILE.lo... yes checking whether g++ accepts -M for generating dependencies... yes checking whether g++ supports -c -o FILE.lo... yes checking whether C runtime needs -D__NO_MATH_INLINES... yes checking for xmkmf... /usr/openwin/bin/xmkmf checking for off_t... yes checking for working alloca.h... yes checking for alloca... yes checking whether alloca is declared... yes checking for access... yes checking for chdir... yes checking for expm1... yes checking for fcntl... yes checking for finite... yes checking for fseeko... yes checking for ftello... yes checking for ftruncate... yes checking for getcwd... yes checking for getgrgid... yes checking for getpwuid... yes checking for getuid... yes checking for hypot... yes checking for isascii... yes checking for log1p... yes checking for matherr... yes checking for mkdtemp... no checking for mkfifo... yes checking for popen... yes checking for putenv... yes checking for realpath... yes checking for rint... yes checking for setenv... yes checking for strcoll... yes checking for stat... yes checking for strerror... yes checking for strptime... yes checking for symlink... yes checking for system... yes checking for times... yes checking for unsetenv... yes checking whether isfinite is declared... no checking whether isnan is declared... yes checking for finite... (cached) yes checking for isnan... yes checking whether isfinite is declared... (cached) no checking whether isnan is declared... (cached) yes checking whether you have IEEE 754 floating-point arithmetic... yes checking for nl_langinfo and CODESET... yes checking for acosh... yes checking for asinh... yes checking for atanh... yes checking for snprintf... yes checking for strdup... yes checking for strncasecmp... yes checking for vsnprintf... yes checking whether acosh is declared... yes checking whether asinh is declared... yes checking whether atanh is declared... yes checking whether snprintf is declared... yes checking whether strdup is declared... no checking whether strncasecmp is declared... no checking whether vsnprintf is declared... yes checking for library containing connect... -lsocket checking for library containing gethostbyname... -lnsl checking for library containing xdr_string... none required checking for __setfpucw... no checking for working calloc... yes checking for working finite... yes checking for working log... no checking for working log1p... yes checking for working strptime... yes checking whether ftell works correctly on files opened for append... yes checking whether C99 double complex is supported... checking complex.h usability... yes checking complex.h presence... yes checking for complex.h... yes checking for double complex... yes checking for cexp... yes checking for clog... yes checking for csqrt... yes checking for cpow... yes checking for ccos... yes checking for csin... yes checking for ctan... yes checking for cacos... yes checking for casin... yes checking for catan... yes checking for ccosh... yes checking for csinh... yes checking for ctanh... yes checking for cacosh... yes checking for casinh... yes checking for catanh... yes checking whether C99 double complex is compatible with Rcomplex... no no checking for cblas_cdotu_sub in vecLib framework... no checking for dgemm_... no checking for ATL_xerbla in -latlas... no checking for dgemm_ in -lblas... no checking for dgemm_ in -lsunperf... no checking for dgemm_ in -lblas... (cached) no checking for dgemm_ in -lblas... (cached) no checking wchar.h usability... yes checking wchar.h presence... yes checking for wchar.h... yes checking wctype.h usability... yes checking wctype.h presence... yes checking for wctype.h... yes checking for mbrtowc... yes checking for mbstowcs... yes checking for wcrtomb... yes checking for wcscoll... yes checking for wcsftime... yes checking for wcstombs... yes checking for wcswidth... yes checking for wctrans... yes checking for wcwidth... yes checking whether wcwidth is declared... yes checking whether wcswidth is declared... yes checking for wctrans_t... yes checking iconv.h usability... yes checking iconv.h presence... yes checking for iconv.h... yes checking for iconv... yes checking whether iconv() accepts "UTF-8" and "latin1"... no checking for iconvlist... no checking for X... libraries , headers checking for gethostbyname... yes checking for connect... yes checking for remove... yes checking for shmat... yes checking for IceConnectionNumber in -lICE... yes using X11 ... yes checking for KeySym... yes checking for CFStringGetSystemEncoding in CoreFoundation framework... no checking for tclConfig.sh... no checking for tclConfig.sh in library (sub)directories... /usr/local/lib/tclConfig.sh checking for tkConfig.sh... no checking for tkConfig.sh in library (sub)directories... no checking /usr/local/include/tcl8.3/generic/tcl.h usability... no checking /usr/local/include/tcl8.3/generic/tcl.h presence... no checking for /usr/local/include/tcl8.3/generic/tcl.h... no checking /usr/local/include/tcl8.3/tcl.h usability... no checking /usr/local/include/tcl8.3/tcl.h presence... no checking for /usr/local/include/tcl8.3/tcl.h... no checking /usr/local/include/tcl.h usability... yes checking /usr/local/include/tcl.h presence... yes checking for /usr/local/include/tcl.h... yes checking for tk.h... no checking for BSD networking... yes checking if jpeglib version >= 6b... yes checking for jpeg_destroy_compress in -ljpeg... yes checking for main in -lz... yes checking if libpng version >= 1.0.5... yes checking for png_create_write_struct in -lpng... yes checking rpc/types.h usability... yes checking rpc/types.h presence... yes checking for rpc/types.h... yes checking for rpc/xdr.h... yes checking for XDR support... yes checking whether zlib support needs to be compiled... yes checking mmap support for zlib... yes checking whether bzip2 support needs to be compiled... yes checking whether PCRE support needs to be compiled... yes checking whether leap seconds are treated according to POSIX... yes checking for setitimer... yes checking for lpr... no checking for lp... lp checking for paperconf... false checking for java... /usr/bin/java checking for javac... /usr/bin/javac checking whether Java interpreter works... yes checking for Java environment... in /usr/jdk/instances/jdk1.5.0/jre checking whether NLS is requested... yes checking whether make sets $(MAKE)... yes checking for msgfmt... no checking for gmsgfmt... : checking for xgettext... no checking for msgmerge... no checking for strerror in -lcposix... no checking for signed... yes checking for inline... inline checking for off_t... (cached) yes checking for long long... (cached) yes checking for long double... yes checking for wchar_t... yes checking for wint_t... yes checking for inttypes.h... yes checking for stdint.h... yes checking for intmax_t... yes checking whether printf() supports POSIX/XSI format strings... yes checking for stdlib.h... (cached) no checking for unistd.h... (cached) no checking for getpagesize... yes checking for working mmap... yes checking whether we are using the GNU C Library 2.1 or newer... no checking whether integer division by zero raises SIGFPE... yes checking for unsigned long long... yes checking for inttypes.h... yes checking whether the inttypes.h PRIxNN macros are broken... no checking for stdint.h... (cached) no checking for SIZE_MAX... yes checking for stdint.h... (cached) no checking for non-GNU ld... /usr/ccs/bin/ld checking if the linker (/usr/ccs/bin/ld) is GNU ld... no checking for shared library run path origin... done checking for ptrdiff_t... no checking argz.h usability... no checking argz.h presence... no checking for argz.h... no checking for limits.h... (cached) yes checking for locale.h... (cached) yes checking nl_types.h usability... yes checking nl_types.h presence... yes checking for nl_types.h... yes checking malloc.h usability... yes checking malloc.h presence... yes checking for malloc.h... yes checking stddef.h usability... yes checking stddef.h presence... yes checking for stddef.h... yes checking for stdlib.h... (cached) no checking for string.h... (cached) no checking for unistd.h... (cached) no checking for sys/param.h... (cached) yes checking for asprintf... no checking for fwprintf... yes checking for getcwd... (cached) yes checking for getegid... yes checking for geteuid... yes checking for getgid... yes checking for getuid... (cached) yes checking for mempcpy... no checking for munmap... yes checking for putenv... (cached) yes checking for setenv... (cached) yes checking for setlocale... yes checking for snprintf... (cached) yes checking for stpcpy... no checking for strcasecmp... yes checking for strdup... (cached) yes checking for strtoul... yes checking for tsearch... yes checking for wcslen... yes checking for __argz_count... no checking for __argz_stringify... no checking for __argz_next... no checking for __fsetlocking... yes checking whether _snprintf is declared... no checking whether _snwprintf is declared... no checking whether feof_unlocked is declared... no checking whether fgets_unlocked is declared... no checking whether getc_unlocked is declared... no checking for iconv... yes checking for iconv declaration... extern size_t iconv (iconv_t cd, const char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft); checking for nl_langinfo and CODESET... (cached) yes checking for LC_MESSAGES... yes checking for bison... bison checking version of bison... 1.875, ok checking whether included gettext is requested... no checking for GNU gettext in libc... no checking for GNU gettext in libintl... no checking whether to use NLS... yes checking where the gettext function comes from... included intl directory configure: creating ./config.status config.status: creating Makeconf config.status: creating Makefile config.status: creating doc/Makefile config.status: creating doc/html/Makefile config.status: creating doc/html/search/Makefile config.status: creating doc/manual/Makefile config.status: creating etc/Makefile config.status: creating etc/Makeconf config.status: creating etc/Renviron config.status: creating m4/Makefile config.status: creating po/Makefile.in config.status: creating share/Makefile config.status: creating src/Makefile config.status: creating src/appl/Makefile config.status: creating src/extra/Makefile config.status: creating src/extra/bzip2/Makefile config.status: creating src/extra/intl/Makefile config.status: creating src/extra/pcre/Makefile config.status: creating src/extra/xdr/Makefile config.status: creating src/extra/zlib/Makefile config.status: creating src/include/Makefile config.status: creating src/include/Rmath.h0 config.status: creating src/include/R_ext/Makefile config.status: creating src/library/Recommended/Makefile config.status: creating src/library/Makefile config.status: creating src/library/base/DESCRIPTION config.status: creating src/library/base/Makefile config.status: creating src/library/datasets/DESCRIPTION config.status: creating src/library/datasets/Makefile config.status: creating src/library/graphics/DESCRIPTION config.status: creating src/library/graphics/Makefile config.status: creating src/library/grDevices/DESCRIPTION config.status: creating src/library/grDevices/Makefile config.status: creating src/library/grDevices/src/Makefile config.status: creating src/library/grid/DESCRIPTION config.status: creating src/library/grid/Makefile config.status: creating src/library/grid/src/Makefile config.status: creating src/library/methods/DESCRIPTION config.status: creating src/library/methods/Makefile config.status: creating src/library/methods/src/Makefile config.status: creating src/library/profile/Makefile config.status: creating src/library/stats/DESCRIPTION config.status: creating src/library/stats/Makefile config.status: creating src/library/stats/src/Makefile config.status: creating src/library/stats4/DESCRIPTION config.status: creating src/library/stats4/Makefile config.status: creating src/library/splines/DESCRIPTION config.status: creating src/library/splines/Makefile config.status: creating src/library/splines/src/Makefile config.status: creating src/library/tcltk/DESCRIPTION config.status: creating src/library/tcltk/Makefile config.status: creating src/library/tcltk/src/Makefile config.status: creating src/library/tools/DESCRIPTION config.status: creating src/library/tools/Makefile config.status: creating src/library/tools/src/Makefile config.status: creating src/library/utils/DESCRIPTION config.status: creating src/library/utils/Makefile config.status: creating src/main/Makefile config.status: creating src/modules/Makefile config.status: creating src/modules/X11/Makefile config.status: creating src/modules/internet/Makefile config.status: creating src/modules/lapack/Makefile config.status: creating src/modules/vfonts/Makefile config.status: creating src/nmath/Makefile config.status: creating src/nmath/standalone/Makefile config.status: creating src/scripts/Makefile config.status: creating src/scripts/COMPILE config.status: creating src/scripts/INSTALL config.status: creating src/scripts/REMOVE config.status: creating src/scripts/R.sh config.status: creating src/scripts/Rdconv config.status: creating src/scripts/Rprof config.status: creating src/scripts/SHLIB config.status: creating src/scripts/Sd2Rd config.status: creating src/scripts/build config.status: creating src/scripts/check config.status: creating src/scripts/f77 config.status: creating src/unix/Makefile config.status: creating tests/Makefile config.status: creating tests/Embedding/Makefile config.status: creating tests/Examples/Makefile config.status: creating tests/Native/Makefile config.status: creating tools/Makefile config.status: creating src/include/config.h config.status: src/include/config.h is unchanged config.status: executing default-1 commands config.status: creating po/POTFILES config.status: creating po/Makefile config.status: executing stamp-h commands R is now configured for i386-pc-solaris2.10 Source directory: . Installation directory: /usr/local C compiler: gcc -D__NO_MATH_INLINES C++ compiler: g++ Fortran compiler: g77 Interfaces supported: X11 External libraries: Additional capabilities: PNG, JPEG, MBCS, NLS Options enabled: R profiling Recommended packages: no configure: WARNING: you cannot build DVI versions of the R manuals configure: WARNING: you cannot build PDF versions of the R manuals $ $ make creating src/scripts/R.fe config.status: creating src/include/config.h config.status: src/include/config.h is unchanged Rmath.h is unchanged `libbz2.a' is up to date. `libpcre.a' is up to date. `libz.a' is up to date. ../../../src/include/libintl.h is unchanged ../../../include/libintl.h is unchanged `localecharset.h' is up to date. `libintl.a' is up to date. `libappl.a' is up to date. `libnmath.a' is up to date. `libunix.a' is up to date. gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -D__NO_MATH_INLINES -c connections.c -o connections.o connections.c: In function `fifo_open': connections.c:626: error: storage size of `sb' isn't known connections.c:649: error: `S_IFIFO' undeclared (first use in this function) connections.c:649: error: (Each undeclared identifier is reported only once connections.c:649: error: for each function it appears in.) *** Error code 1 make: Fatal error: Command failed for target `connections.o' Current working directory /dska/dbdev/home/denny/R/R-2.2.1/src/main *** Error code 1 The following command caused the error: make install-bin-local make: Fatal error: Command failed for target `R' Current working directory /dska/dbdev/home/denny/R/R-2.2.1/src/main *** Error code 1 The following command caused the error: for d in scripts include extra appl nmath unix main modules library; do \ (cd ${d} && make R) || exit 1; \ done make: Fatal error: Command failed for target `R' Current working directory /dska/dbdev/home/denny/R/R-2.2.1/src *** Error code 1 The following command caused the error: for d in m4 tools doc etc share src tests po; do \ (cd ${d} && make R) || exit 1; \ done make: Fatal error: Command failed for target `R' $
ripley at stats.ox.ac.uk
2006-Jun-23 07:24 UTC
[Rd] Error - Compiling R on a Sun V40Z - R/R-2.2.1 (PR#9024)
The current version of R is 2.3.1 patched. You are asked not to report problems on obselete versions of R. This seems to be gcc 3.3.6, also obselete. On Fri, 23 Jun 2006, denny at crosstab.com wrote:> configure: WARNING: dlfcn.h: present but cannot be compiled > configure: WARNING: dlfcn.h: check for missing prerequisite headers? > configure: WARNING: dlfcn.h: see the Autoconf documentation > configure: WARNING: dlfcn.h: section "Present But Cannot Be Compiled" > configure: WARNING: dlfcn.h: proceeding with the preprocessor's result > configure: WARNING: dlfcn.h: in the future, the compiler will take > precedence > configure: WARNING: ## ----------------------------------- ## > configure: WARNING: ## Report this to r-bugs at R-project.org ## > configure: WARNING: ## ----------------------------------- ## > checking for dlfcn.h... yesThat seems to be a Solaris/gcc and not an R problem, though.> -------------------------------------------------------------------------------------------------------------------------- > > LANG=C > LD_LIBRARY_PATH=/usr/sfw/lib:/usr/lib:/usr/local/lib:/usr/local/BerkeleyDB.4.4/lib > LIVE_BIN_DIR=/dbdev/bin/:/dbdev/3.0.0/ > LIVE_DIR=/dbdev > LOGNAME=denny > MAIL=/var/mail//denny > MANPATH=/usr/sfw/man:/opt/sfw/pgsql/man::/usr/share/man:/usr/local/man > NAMS_LOGINS=/dbdev/logins > OPT_BIN_DIR=/usr/local/bin:/usr/sfw/bin > OPT_MAN_DIR=/usr/sfw/man:/opt/sfw/pgsql/man > PATH=/usr/ccs/bin:.:/dbdev/bin/:/dbdev/3.0.0/:/usr/local/bin:/usr/sfw/bin:/usr/bin:/opt/sfw/bin:/opt/sfw/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/usr/local/pgsql/bin > > -------------------------------------------------------------------------------------------------------------------------- > $ cat ./z > ./configure --with-readline=no --without-recommended-packages > $ . ./z > checking build system type... i386-pc-solaris2.10 > checking host system type... i386-pc-solaris2.10 > loading site script './config.site' > loading build specific script './config.site' > checking for pwd... /usr/bin/pwd > checking whether builddir is srcdir... yes > checking for working aclocal... missing > checking for working autoconf... missing > checking for working automake... missing > checking for working autoheader... missing > checking for working makeinfo... found > checking for gawk... no > checking for mawk... no > checking for nawk... nawk > checking for egrep... egrep > checking whether ln -s works... yes > checking for ranlib... ranlib > checking for bison... bison -y > checking for ar... ar > checking for a BSD-compatible install... tools/install-sh -c > checking for sed... /usr/xpg4/bin/sed > checking for less... /usr/bin/less > checking for perl... /usr/local/bin/perl > checking whether perl version is at least 5.004... yes > checking for dvips... no > checking for tex... no > checking for latex... no > configure: WARNING: you cannot build DVI versions of the R manuals > checking for makeindex... no > checking for pdftex... no > checking for pdflatex... no > configure: WARNING: you cannot build PDF versions of the R manuals > checking for makeinfo... /usr/sfw/bin/makeinfo > checking for unzip... /usr/bin/unzip > checking for zip... /usr/bin/zip > checking for gzip... /dbdev/bin//gzip > checking for firefox... no > checking for mozilla... /usr/sfw/bin/mozilla > using default browser ... /usr/sfw/bin/mozilla > checking for acroread... no > checking for acroread4... no > checking for xpdf... no > checking for gv... no > checking for gnome-gv... no > checking for ggv... /usr/bin/ggv > checking for gcc... gcc > checking for C compiler default output file name... a.out > checking whether the C compiler works... yes > checking whether we are cross compiling... no > checking for suffix of executables... > checking for suffix of object files... > checking whether we are using the GNU C compiler... no > checking whether gcc accepts -g... no > checking for gcc option to accept ANSI C... none needed > checking how to run the C preprocessor... gcc -E > checking how to run the C preprocessor... gcc -E > checking for f95... no > checking for fort... no > checking for xlf95... no > checking for ifort... no > checking for ifc... no > checking for efc... no > checking for pgf95... no > checking for lf95... no > checking for gfortran... no > checking for ftn... no > checking for g95... no > checking for f90... no > checking for xlf90... no > checking for pgf90... no > checking for pghpf... no > checking for epcf90... no > checking for g77... g77 > checking whether we are using the GNU Fortran 77 compiler... no > checking whether g77 accepts -g... no > checking for g++... g++ > checking whether we are using the GNU C++ compiler... no > checking whether g++ accepts -g... no > checking how to run the C++ preprocessor... g++ -E > checking for a sed that does not truncate output... /usr/bin/sed > checking for non-GNU ld... /usr/ccs/bin/ld > checking if the linker (/usr/ccs/bin/ld) is GNU ld... no > checking for /usr/ccs/bin/ld option to reload object files... -r > checking for BSD-compatible nm... /usr/ccs/bin/nm -p > checking how to recognise dependent libraries... pass_all > checking for ANSI C header files... no > checking for sys/types.h... no > checking for sys/stat.h... no > checking for stdlib.h... no > checking for string.h... no > checking for memory.h... no > checking for strings.h... no > checking for inttypes.h... no > checking for stdint.h... no > checking for unistd.h... no > checking dlfcn.h usability... no > checking dlfcn.h presence... yes > configure: WARNING: dlfcn.h: present but cannot be compiled > configure: WARNING: dlfcn.h: check for missing prerequisite headers? > configure: WARNING: dlfcn.h: see the Autoconf documentation > configure: WARNING: dlfcn.h: section "Present But Cannot Be Compiled" > configure: WARNING: dlfcn.h: proceeding with the preprocessor's result > configure: WARNING: dlfcn.h: in the future, the compiler will take > precedence > configure: WARNING: ## ----------------------------------- ## > configure: WARNING: ## Report this to r-bugs at R-project.org ## > configure: WARNING: ## ----------------------------------- ## > checking for dlfcn.h... yes > checking the maximum length of command line arguments... 262144 > checking command to parse /usr/ccs/bin/nm -p output from gcc object... > failed > checking for objdir... .libs > checking for ranlib... (cached) ranlib > checking for strip... strip > checking if gcc static flag works... yes > checking for gcc option to produce PIC... -KPIC > checking if gcc PIC flag -KPIC works... no > checking if gcc supports -c -o file.o... yes > checking whether the gcc linker (/usr/ccs/bin/ld) supports shared > libraries... yes > checking dynamic linker characteristics... solaris2.10 ld.so > checking how to hardcode library paths into programs... immediate > checking whether stripping libraries is possible... no > checking if libtool supports shared libraries... yes > checking whether to build shared libraries... yes > checking whether to build static libraries... no > configure: creating libtool > appending configuration tag "CXX" to libtool > checking whether the g++ linker (/usr/ccs/bin/ld) supports shared > libraries... yes > checking for g++ option to produce PIC... > checking if g++ supports -c -o file.o... yes > checking whether the g++ linker (/usr/ccs/bin/ld) supports shared > libraries... yes > checking dynamic linker characteristics... solaris2.10 ld.so > checking how to hardcode library paths into programs... immediate > checking whether stripping libraries is possible... no > appending configuration tag "F77" to libtool > checking if libtool supports shared libraries... yes > checking whether to build shared libraries... yes > checking whether to build static libraries... no > checking for g77 option to produce PIC... -KPIC > checking if g77 PIC flag -KPIC works... no > checking if g77 supports -c -o file.o... yes > checking whether the g77 linker (/usr/ccs/bin/ld) supports shared > libraries... yes > checking dynamic linker characteristics... solaris2.10 ld.so > checking how to hardcode library paths into programs... immediate > checking whether stripping libraries is possible... no > checking whether makeinfo version is at least 4.7... yes > checking for cos in -lm... yes > checking for sin in -lm... yes > checking for dlopen in -ldl... yes > checking for ANSI C header files... (cached) no > checking whether time.h and sys/time.h may both be included... yes > checking for dirent.h that defines DIR... yes > checking for library containing opendir... none required > checking for sys/wait.h that is POSIX.1 compatible... yes > checking arpa/inet.h usability... yes > checking arpa/inet.h presence... yes > checking for arpa/inet.h... yes > checking dl.h usability... no > checking dl.h presence... no > checking for dl.h... no > checking for dlfcn.h... (cached) yes > checking elf.h usability... yes > checking elf.h presence... yes > checking for elf.h... yes > checking fcntl.h usability... yes > checking fcntl.h presence... yes > checking for fcntl.h... yes > checking floatingpoint.h usability... yes > checking floatingpoint.h presence... yes > checking for floatingpoint.h... yes > checking fpu_control.h usability... no > checking fpu_control.h presence... no > checking for fpu_control.h... no > checking grp.h usability... yes > checking grp.h presence... yes > checking for grp.h... yes > checking ieee754.h usability... no > checking ieee754.h presence... no > checking for ieee754.h... no > checking ieeefp.h usability... yes > checking ieeefp.h presence... yes > checking for ieeefp.h... yes > checking limits.h usability... yes > checking limits.h presence... yes > checking for limits.h... yes > checking locale.h usability... yes > checking locale.h presence... yes > checking for locale.h... yes > checking netdb.h usability... yes > checking netdb.h presence... yes > checking for netdb.h... yes > checking netinet/in.h usability... yes > checking netinet/in.h presence... yes > checking for netinet/in.h... yes > checking pwd.h usability... yes > checking pwd.h presence... yes > checking for pwd.h... yes > checking for strings.h... (cached) no > checking sys/param.h usability... yes > checking sys/param.h presence... yes > checking for sys/param.h... yes > checking sys/select.h usability... yes > checking sys/select.h presence... yes > checking for sys/select.h... yes > checking sys/socket.h usability... yes > checking sys/socket.h presence... yes > checking for sys/socket.h... yes > checking for sys/stat.h... (cached) no > checking sys/time.h usability... yes > checking sys/time.h presence... yes > checking for sys/time.h... yes > checking sys/times.h usability... yes > checking sys/times.h presence... yes > checking for sys/times.h... yes > checking sys/utsname.h usability... yes > checking sys/utsname.h presence... yes > checking for sys/utsname.h... yes > checking for unistd.h... (cached) no > checking errno.h usability... yes > checking errno.h presence... yes > checking for errno.h... yes > checking stdarg.h usability... yes > checking stdarg.h presence... yes > checking for stdarg.h... yes > checking for string.h... (cached) no > checking whether setjmp.h is POSIX.1 compatible... yes > checking for GNU C library with version >= 2... no > checking return type of signal handlers... void > checking for pid_t... no > checking for size_t... yes > checking whether SIZE_MAX is declared... yes > checking for blkcnt_t... no > checking for type of socket length... socklen_t * > checking whether byte ordering is bigendian... no > checking for an ANSI C-conforming const... yes > checking for inline... inline > checking for int... yes > checking size of int... 4 > checking for long... yes > checking size of long... 4 > checking for long long... yes > checking size of long long... 8 > checking for long double... yes > checking size of long double... 12 > checking whether we can compute C Make dependencies... yes, using gcc -M > checking whether gcc supports -c -o FILE.lo... yes > checking how to get verbose linking output from g77... -v > checking for Fortran libraries of g77... -L/usr/ccs/lib -L/usr/lib > -L/usr/local/lib > -L/dska/local/bin/../lib/gcc-lib/i386-pc-solaris2.10/3.3.6 > -L/dska/local/bin/../lib/gcc-lib > -L/usr/local/lib/gcc-lib/i386-pc-solaris2.10/3.3.6 -L/usr/ccs/bin > -L/dska/local/bin/../lib/gcc-lib/i386-pc-solaris2.10/3.3.6/../../.. > -L/usr/local/lib/gcc-lib/i386-pc-solaris2.10/3.3.6/../../.. -lfrtbegin > -lg2c -lm -lgcc_s > checking how to get verbose linking output from gcc... -v > checking for C libraries of gcc... -L/usr/ccs/lib -L/usr/lib > -L/usr/local/lib > -L/dska/local/bin/../lib/gcc-lib/i386-pc-solaris2.10/3.3.6 > -L/dska/local/bin/../lib/gcc-lib > -L/usr/local/lib/gcc-lib/i386-pc-solaris2.10/3.3.6 -L/usr/ccs/bin > -L/dska/local/bin/../lib/gcc-lib/i386-pc-solaris2.10/3.3.6/../../.. > -L/usr/local/lib/gcc-lib/i386-pc-solaris2.10/3.3.6/../../.. -lgcc_eh > checking for dummy main to link with Fortran libraries... none > checking for Fortran name-mangling scheme... lower case, underscore, > extra underscore > checking whether g77 appends underscores to external names... yes > checking whether mixed C/Fortran code can be run... yes > checking whether g77 and gcc agree on int and double... yes > checking whether g77 and gcc agree on double complex... yes > checking whether g77 supports -c -o FILE.lo... yes > checking whether g++ accepts -M for generating dependencies... yes > checking whether g++ supports -c -o FILE.lo... yes > checking whether C runtime needs -D__NO_MATH_INLINES... yes > checking for xmkmf... /usr/openwin/bin/xmkmf > checking for off_t... yes > checking for working alloca.h... yes > checking for alloca... yes > checking whether alloca is declared... yes > checking for access... yes > checking for chdir... yes > checking for expm1... yes > checking for fcntl... yes > checking for finite... yes > checking for fseeko... yes > checking for ftello... yes > checking for ftruncate... yes > checking for getcwd... yes > checking for getgrgid... yes > checking for getpwuid... yes > checking for getuid... yes > checking for hypot... yes > checking for isascii... yes > checking for log1p... yes > checking for matherr... yes > checking for mkdtemp... no > checking for mkfifo... yes > checking for popen... yes > checking for putenv... yes > checking for realpath... yes > checking for rint... yes > checking for setenv... yes > checking for strcoll... yes > checking for stat... yes > checking for strerror... yes > checking for strptime... yes > checking for symlink... yes > checking for system... yes > checking for times... yes > checking for unsetenv... yes > checking whether isfinite is declared... no > checking whether isnan is declared... yes > checking for finite... (cached) yes > checking for isnan... yes > checking whether isfinite is declared... (cached) no > checking whether isnan is declared... (cached) yes > checking whether you have IEEE 754 floating-point arithmetic... yes > checking for nl_langinfo and CODESET... yes > checking for acosh... yes > checking for asinh... yes > checking for atanh... yes > checking for snprintf... yes > checking for strdup... yes > checking for strncasecmp... yes > checking for vsnprintf... yes > checking whether acosh is declared... yes > checking whether asinh is declared... yes > checking whether atanh is declared... yes > checking whether snprintf is declared... yes > checking whether strdup is declared... no > checking whether strncasecmp is declared... no > checking whether vsnprintf is declared... yes > checking for library containing connect... -lsocket > checking for library containing gethostbyname... -lnsl > checking for library containing xdr_string... none required > checking for __setfpucw... no > checking for working calloc... yes > checking for working finite... yes > checking for working log... no > checking for working log1p... yes > checking for working strptime... yes > checking whether ftell works correctly on files opened for append... yes > checking whether C99 double complex is supported... > checking complex.h usability... yes > checking complex.h presence... yes > checking for complex.h... yes > checking for double complex... yes > checking for cexp... yes > checking for clog... yes > checking for csqrt... yes > checking for cpow... yes > checking for ccos... yes > checking for csin... yes > checking for ctan... yes > checking for cacos... yes > checking for casin... yes > checking for catan... yes > checking for ccosh... yes > checking for csinh... yes > checking for ctanh... yes > checking for cacosh... yes > checking for casinh... yes > checking for catanh... yes > checking whether C99 double complex is compatible with Rcomplex... no > no > checking for cblas_cdotu_sub in vecLib framework... no > checking for dgemm_... no > checking for ATL_xerbla in -latlas... no > checking for dgemm_ in -lblas... no > checking for dgemm_ in -lsunperf... no > checking for dgemm_ in -lblas... (cached) no > checking for dgemm_ in -lblas... (cached) no > checking wchar.h usability... yes > checking wchar.h presence... yes > checking for wchar.h... yes > checking wctype.h usability... yes > checking wctype.h presence... yes > checking for wctype.h... yes > checking for mbrtowc... yes > checking for mbstowcs... yes > checking for wcrtomb... yes > checking for wcscoll... yes > checking for wcsftime... yes > checking for wcstombs... yes > checking for wcswidth... yes > checking for wctrans... yes > checking for wcwidth... yes > checking whether wcwidth is declared... yes > checking whether wcswidth is declared... yes > checking for wctrans_t... yes > checking iconv.h usability... yes > checking iconv.h presence... yes > checking for iconv.h... yes > checking for iconv... yes > checking whether iconv() accepts "UTF-8" and "latin1"... no > checking for iconvlist... no > checking for X... libraries , headers > checking for gethostbyname... yes > checking for connect... yes > checking for remove... yes > checking for shmat... yes > checking for IceConnectionNumber in -lICE... yes > using X11 ... yes > checking for KeySym... yes > checking for CFStringGetSystemEncoding in CoreFoundation framework... no > checking for tclConfig.sh... no > checking for tclConfig.sh in library (sub)directories... > /usr/local/lib/tclConfig.sh > checking for tkConfig.sh... no > checking for tkConfig.sh in library (sub)directories... no > checking /usr/local/include/tcl8.3/generic/tcl.h usability... no > checking /usr/local/include/tcl8.3/generic/tcl.h presence... no > checking for /usr/local/include/tcl8.3/generic/tcl.h... no > checking /usr/local/include/tcl8.3/tcl.h usability... no > checking /usr/local/include/tcl8.3/tcl.h presence... no > checking for /usr/local/include/tcl8.3/tcl.h... no > checking /usr/local/include/tcl.h usability... yes > checking /usr/local/include/tcl.h presence... yes > checking for /usr/local/include/tcl.h... yes > checking for tk.h... no > checking for BSD networking... yes > checking if jpeglib version >= 6b... yes > checking for jpeg_destroy_compress in -ljpeg... yes > checking for main in -lz... yes > checking if libpng version >= 1.0.5... yes > checking for png_create_write_struct in -lpng... yes > checking rpc/types.h usability... yes > checking rpc/types.h presence... yes > checking for rpc/types.h... yes > checking for rpc/xdr.h... yes > checking for XDR support... yes > checking whether zlib support needs to be compiled... yes > checking mmap support for zlib... yes > checking whether bzip2 support needs to be compiled... yes > checking whether PCRE support needs to be compiled... yes > checking whether leap seconds are treated according to POSIX... yes > checking for setitimer... yes > checking for lpr... no > checking for lp... lp > checking for paperconf... false > checking for java... /usr/bin/java > checking for javac... /usr/bin/javac > checking whether Java interpreter works... yes > checking for Java environment... in /usr/jdk/instances/jdk1.5.0/jre > checking whether NLS is requested... yes > checking whether make sets $(MAKE)... yes > checking for msgfmt... no > checking for gmsgfmt... : > checking for xgettext... no > checking for msgmerge... no > checking for strerror in -lcposix... no > checking for signed... yes > checking for inline... inline > checking for off_t... (cached) yes > checking for long long... (cached) yes > checking for long double... yes > checking for wchar_t... yes > checking for wint_t... yes > checking for inttypes.h... yes > checking for stdint.h... yes > checking for intmax_t... yes > checking whether printf() supports POSIX/XSI format strings... yes > checking for stdlib.h... (cached) no > checking for unistd.h... (cached) no > checking for getpagesize... yes > checking for working mmap... yes > checking whether we are using the GNU C Library 2.1 or newer... no > checking whether integer division by zero raises SIGFPE... yes > checking for unsigned long long... yes > checking for inttypes.h... yes > checking whether the inttypes.h PRIxNN macros are broken... no > checking for stdint.h... (cached) no > checking for SIZE_MAX... yes > checking for stdint.h... (cached) no > checking for non-GNU ld... /usr/ccs/bin/ld > checking if the linker (/usr/ccs/bin/ld) is GNU ld... no > checking for shared library run path origin... done > checking for ptrdiff_t... no > checking argz.h usability... no > checking argz.h presence... no > checking for argz.h... no > checking for limits.h... (cached) yes > checking for locale.h... (cached) yes > checking nl_types.h usability... yes > checking nl_types.h presence... yes > checking for nl_types.h... yes > checking malloc.h usability... yes > checking malloc.h presence... yes > checking for malloc.h... yes > checking stddef.h usability... yes > checking stddef.h presence... yes > checking for stddef.h... yes > checking for stdlib.h... (cached) no > checking for string.h... (cached) no > checking for unistd.h... (cached) no > checking for sys/param.h... (cached) yes > checking for asprintf... no > checking for fwprintf... yes > checking for getcwd... (cached) yes > checking for getegid... yes > checking for geteuid... yes > checking for getgid... yes > checking for getuid... (cached) yes > checking for mempcpy... no > checking for munmap... yes > checking for putenv... (cached) yes > checking for setenv... (cached) yes > checking for setlocale... yes > checking for snprintf... (cached) yes > checking for stpcpy... no > checking for strcasecmp... yes > checking for strdup... (cached) yes > checking for strtoul... yes > checking for tsearch... yes > checking for wcslen... yes > checking for __argz_count... no > checking for __argz_stringify... no > checking for __argz_next... no > checking for __fsetlocking... yes > checking whether _snprintf is declared... no > checking whether _snwprintf is declared... no > checking whether feof_unlocked is declared... no > checking whether fgets_unlocked is declared... no > checking whether getc_unlocked is declared... no > checking for iconv... yes > checking for iconv declaration... > extern size_t iconv (iconv_t cd, const char * *inbuf, size_t > *inbytesleft, char * *outbuf, size_t *outbytesleft); > checking for nl_langinfo and CODESET... (cached) yes > checking for LC_MESSAGES... yes > checking for bison... bison > checking version of bison... 1.875, ok > checking whether included gettext is requested... no > checking for GNU gettext in libc... no > checking for GNU gettext in libintl... no > checking whether to use NLS... yes > checking where the gettext function comes from... included intl directory > configure: creating ./config.status > config.status: creating Makeconf > config.status: creating Makefile > config.status: creating doc/Makefile > config.status: creating doc/html/Makefile > config.status: creating doc/html/search/Makefile > config.status: creating doc/manual/Makefile > config.status: creating etc/Makefile > config.status: creating etc/Makeconf > config.status: creating etc/Renviron > config.status: creating m4/Makefile > config.status: creating po/Makefile.in > config.status: creating share/Makefile > config.status: creating src/Makefile > config.status: creating src/appl/Makefile > config.status: creating src/extra/Makefile > config.status: creating src/extra/bzip2/Makefile > config.status: creating src/extra/intl/Makefile > config.status: creating src/extra/pcre/Makefile > config.status: creating src/extra/xdr/Makefile > config.status: creating src/extra/zlib/Makefile > config.status: creating src/include/Makefile > config.status: creating src/include/Rmath.h0 > config.status: creating src/include/R_ext/Makefile > config.status: creating src/library/Recommended/Makefile > config.status: creating src/library/Makefile > config.status: creating src/library/base/DESCRIPTION > config.status: creating src/library/base/Makefile > config.status: creating src/library/datasets/DESCRIPTION > config.status: creating src/library/datasets/Makefile > config.status: creating src/library/graphics/DESCRIPTION > config.status: creating src/library/graphics/Makefile > config.status: creating src/library/grDevices/DESCRIPTION > config.status: creating src/library/grDevices/Makefile > config.status: creating src/library/grDevices/src/Makefile > config.status: creating src/library/grid/DESCRIPTION > config.status: creating src/library/grid/Makefile > config.status: creating src/library/grid/src/Makefile > config.status: creating src/library/methods/DESCRIPTION > config.status: creating src/library/methods/Makefile > config.status: creating src/library/methods/src/Makefile > config.status: creating src/library/profile/Makefile > config.status: creating src/library/stats/DESCRIPTION > config.status: creating src/library/stats/Makefile > config.status: creating src/library/stats/src/Makefile > config.status: creating src/library/stats4/DESCRIPTION > config.status: creating src/library/stats4/Makefile > config.status: creating src/library/splines/DESCRIPTION > config.status: creating src/library/splines/Makefile > config.status: creating src/library/splines/src/Makefile > config.status: creating src/library/tcltk/DESCRIPTION > config.status: creating src/library/tcltk/Makefile > config.status: creating src/library/tcltk/src/Makefile > config.status: creating src/library/tools/DESCRIPTION > config.status: creating src/library/tools/Makefile > config.status: creating src/library/tools/src/Makefile > config.status: creating src/library/utils/DESCRIPTION > config.status: creating src/library/utils/Makefile > config.status: creating src/main/Makefile > config.status: creating src/modules/Makefile > config.status: creating src/modules/X11/Makefile > config.status: creating src/modules/internet/Makefile > config.status: creating src/modules/lapack/Makefile > config.status: creating src/modules/vfonts/Makefile > config.status: creating src/nmath/Makefile > config.status: creating src/nmath/standalone/Makefile > config.status: creating src/scripts/Makefile > config.status: creating src/scripts/COMPILE > config.status: creating src/scripts/INSTALL > config.status: creating src/scripts/REMOVE > config.status: creating src/scripts/R.sh > config.status: creating src/scripts/Rdconv > config.status: creating src/scripts/Rprof > config.status: creating src/scripts/SHLIB > config.status: creating src/scripts/Sd2Rd > config.status: creating src/scripts/build > config.status: creating src/scripts/check > config.status: creating src/scripts/f77 > config.status: creating src/unix/Makefile > config.status: creating tests/Makefile > config.status: creating tests/Embedding/Makefile > config.status: creating tests/Examples/Makefile > config.status: creating tests/Native/Makefile > config.status: creating tools/Makefile > config.status: creating src/include/config.h > config.status: src/include/config.h is unchanged > config.status: executing default-1 commands > config.status: creating po/POTFILES > config.status: creating po/Makefile > config.status: executing stamp-h commands > > R is now configured for i386-pc-solaris2.10 > > Source directory: . > Installation directory: /usr/local > > C compiler: gcc -D__NO_MATH_INLINES > C++ compiler: g++ > Fortran compiler: g77 > > Interfaces supported: X11 > External libraries: > Additional capabilities: PNG, JPEG, MBCS, NLS > Options enabled: R profiling > > Recommended packages: no > > configure: WARNING: you cannot build DVI versions of the R manuals > configure: WARNING: you cannot build PDF versions of the R manuals > $ > $ make > creating src/scripts/R.fe > config.status: creating src/include/config.h > config.status: src/include/config.h is unchanged > Rmath.h is unchanged > `libbz2.a' is up to date. > `libpcre.a' is up to date. > `libz.a' is up to date. > ../../../src/include/libintl.h is unchanged > ../../../include/libintl.h is unchanged > `localecharset.h' is up to date. > `libintl.a' is up to date. > `libappl.a' is up to date. > `libnmath.a' is up to date. > `libunix.a' is up to date. > gcc -I../../src/extra/zlib -I../../src/extra/bzip2 > -I../../src/extra/pcre -I. -I../../src/include -I../../src/include > -I/usr/local/include -DHAVE_CONFIG_H -D__NO_MATH_INLINES -c > connections.c -o connections.o > connections.c: In function `fifo_open': > connections.c:626: error: storage size of `sb' isn't known > connections.c:649: error: `S_IFIFO' undeclared (first use in this function) > connections.c:649: error: (Each undeclared identifier is reported only once > connections.c:649: error: for each function it appears in.) > *** Error code 1 > make: Fatal error: Command failed for target `connections.o' > Current working directory /dska/dbdev/home/denny/R/R-2.2.1/src/main > *** Error code 1 > The following command caused the error: > make install-bin-local > make: Fatal error: Command failed for target `R' > Current working directory /dska/dbdev/home/denny/R/R-2.2.1/src/main > *** Error code 1 > The following command caused the error: > for d in scripts include extra appl nmath unix main modules library; do \ > (cd ${d} && make R) || exit 1; \ > done > make: Fatal error: Command failed for target `R' > Current working directory /dska/dbdev/home/denny/R/R-2.2.1/src > *** Error code 1 > The following command caused the error: > for d in m4 tools doc etc share src tests po; do \ > (cd ${d} && make R) || exit 1; \ > done > make: Fatal error: Command failed for target `R' > $ > > ______________________________________________ > R-devel at r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-devel > >-- Brian D. Ripley, ripley at stats.ox.ac.uk Professor of Applied Statistics, http://www.stats.ox.ac.uk/~ripley/ University of Oxford, Tel: +44 1865 272861 (self) 1 South Parks Road, +44 1865 272866 (PA) Oxford OX1 3TG, UK Fax: +44 1865 272595
ripley at stats.ox.ac.uk wrote:> The current version of R is 2.3.1 patched. You are asked not to report > problems on obselete versions of R. > > This seems to be gcc 3.3.6, also obselete.If configure says:>>configure: WARNING: ## ----------------------------------- ## >>configure: WARNING: ## Report this to r-bugs at R-project.org ## >>configure: WARNING: ## ----------------------------------- ##then people might just do what it says. Perhaps the message should mention something about current, patched, and obsolete versions... Barry