Atte Tenkanen
2016-Apr-04 04:45 UTC
[R] Question about function DrawDensity3D {VecStatGraphs3D}
Hi, Here is the function DrawDensity3D in package VecStatGraphs3D. My question is: if we use more layers than one, could we change the function in a way that in the final plot only the outmost layer is drawn (the inner layers omitted)? Best regards, Atte Tenkanen function (vectors, Div = 40, Layers = 3, DrawAxes = FALSE) { open3d(windowRect = c(100, 100, 800, 800)) bg3d("white") Cx = vectors[, 1] Cy = vectors[, 2] Cz = vectors[, 3] Cr <- kde3d(x = Cx, y = Cy, z = Cz, n = Div) th <- seq(min(Cr$d), max(Cr$d), len = Layers + 2) ramp <- colorRamp(c("white", "yellow", "red")) colo <- rgb(ramp(seq(0, 1, length = Layers)), maxColorValue = 255) al <- seq(0.1, 0.6, len = Layers) module = sqrt(Cx * Cx + Cy * Cy + Cz * Cz) spheres3d(0, 0, 0, radius = max(module), color = "black", front = "line", back = "line", lwd = 1, smooth = TRUE, lit = TRUE, line_antialias = FALSE, alpha = 0.2) x <- c(0, max(module), 0, 0) y <- c(0, 0, max(module), 0) z <- c(0, 0, 0, max(module)) labels <- c("", "X", "Y", "Z") i <- c(1, 2, 1, 3, 1, 4) text3d(x, y, z, labels, adj = 0.8, cex = 1.5, font = 2, color = "black") segments3d(x[i], y[i], z[i], lwd = 3) rgl.points(x = Cx, y = Cy, z = Cz, size = 3, color = "black") contour3d(Cr$d, level = th[c(-1, -(Layers + 2))], x = Cr$x, y = Cr$y, z = Cr$z, alpha = al, color = colo, add = TRUE, engine = "rgl", fill = TRUE, smooth = 2, material = "shiny") if (DrawAxes == TRUE) { axes3d() } }