Therneau, Terry M., Ph.D.
2014-Mar-20 12:46 UTC
Re: [Re: Does a survival probability(the probability not, experiencing an event) have to be non-increasing?
On 03/20/2014 06:00 AM, r-help-request@r-project.org wrote:> My question is related to a cox model with time-dependent variable. > When I think about it more, I get a little confused about > non-increasing assumption for survival probability for an individual. > For example, for a time-dependent ,say x, assuming increasing x > increases the risk of event. Assume,time t1 < t2. If at x at t1<< x > at t2, obviously, hazard at t1 will less than hazard at t2, assuming > no other covariaates. But is it possible that s(t2|x at t2) > s(t1|x > at t1), since at t2, an individual is at greater risk. This is kind > of confusing to me. > > Thanks for any helpful insights!Time dependent covariates and survival curves are confusing to a lot of people. The Cox model is a hazard model h(t, x) = h_0(t) exp(x beta) which means it is a model of the moment-by-moment risk. A time dependent model replaces x with x(t) which is the moment-by-moment value of x. After the model is fit, one can compute the time dependent cumulative hazard as H(t,x) = \integral_0^t h_0(s) exp(x(s) beta) ds and the survival is S = exp(-H). Since everthing inside the integral is positive H(t) has to be an increasing function of t, and thus S a decreasing one. The key thing to note is that H or S depend on the entire covariate history for a subject. If you have a subject whose value of "x" changes from 1 to 2 at time 10, when computing their survival at time 15 you cannot just use a value of "2" all the way from 0 to 15 in the formula. Many Cox model programs (e.g.SAS) allow for time dependent covariates when computing the Cox fit, but then only allow for fixed covariates when computing a curve. You can only do predictions for people whose covariates never change. (For some diseases I work with such people do not exist, e.g. in PBC your bilirubin WILL rise with time. So such a curve is useless). This adds to the confusion. Terry T.