Yuan, Rebecca
2014-Mar-13 15:59 UTC
[R] How to get the adjusted R squared from GLS() estimator
Hello, Although lm() gives a way to get the adjusted R squared by adjr2 <- summary(mdl)$adj.r.squared I cannot find a way to extract the adjusted R squared from gls(), any hint? Thanks, Rebecca ---------------------------------------------------------------------- This message, and any attachments, is for the intended r...{{dropped:5}}
Greg Snow
2014-Mar-13 21:26 UTC
[R] How to get the adjusted R squared from GLS() estimator
Well if I had it and you asked nicely, then I would be happy to give it to you. Oh, you mean the gls function, not GLS as my initials (my parents are OLS and WLS, perhaps I was destined to regress), sorry. The gls function in the nlme package (is that the one that you are asking about? or is there another gls function?) fits using maximum likelihood (or restricted maximum likelihood) rather than looking at sums of squares, so an adjusted r-squared is not a direct result like in ordinary least squares. The idea of r-squared does not really translate well to models beyond ordinary least squares (see fortune(252), fortune(253), and fortune(254)), so adjusted r-squared would not either. There are other measures of overall model fit that penalize or adjust for the number of terms in the model, e.g. AIC and BIC, perhaps one of those would be better for what you are trying to accomplish. One possibility would be to square the correlation between the original y-values and the predicted y-values (y-hats) as an estimate of r-squared, then apply the same adjustment (http://en.wikipedia.org/wiki/Adjusted_R-squared#Adjusted_R2), but there is no guarantee that it has the same effect for the generalized model (might be an interesting project for a student to look at this by simulation). I would suggest looking into AIC or BIC instead. On Thu, Mar 13, 2014 at 9:59 AM, Yuan, Rebecca <rebecca.yuan at bankofamerica.com> wrote:> Hello, > > Although lm() gives a way to get the adjusted R squared by > > adjr2 <- summary(mdl)$adj.r.squared > > > I cannot find a way to extract the adjusted R squared from gls(), any hint? > > Thanks, > > Rebecca > > ---------------------------------------------------------------------- > This message, and any attachments, is for the intended...{{dropped:14}}