Joseph Clark
2013-Mar-01 17:12 UTC
[R] interactive visualizations - anyone use SVGAnnotation?
Hi all:I found some great demonstrations of interactive presentation graphics
generated in R with the SVGAnnotation package,
here:http://www.omegahat.org/SVGAnnotation/http://www.omegahat.org/SVGAnnotation/SVGAnnotationPaper/SVGAnnotationPaper.htmlI
tried to install the package available at that website (it's not on CRAN)
and am getting some pretty uninformative errors (see below). My best guess is
that the package worked under an earlier version of R but is broken now. Do any
of you use this package for interactive presentation graphics? Or, what are
some good alternative libraries? I've played around a bit with
'iplots' and RStudio's 'manipulate' library, but those are
really geared for exploratory analysis. I'm looking for something geared
toward presentation, for example, on a web page. A good "hello,world"
I want to accomplish would be a time series with 2 or more line graphs that the
viewer can choose between with radio buttons or checkboxes.Thanks in advance!
The error I get when trying to install SVGAnnotation from the file: >
install.packages("SVGAnnotation_0.93-1.tar.gz",repos=NULL)
Warning in install.packages :
package ‘SVGAnnotation_0.93-1.tar.gz’ is not available (for R version 2.15.1)
Installing package(s) into ‘C:/Program Files/R/R-2.15.1/library’
(as ‘lib’ is unspecified)
Warning in install.packages :
error 1 in extracting from zip file
Warning in install.packages :
cannot open compressed file 'SVGAnnotation_0.93-1.tar.gz/DESCRIPTION',
probable reason 'No such file or directory'
Error in install.packages : cannot open the connection
// joseph w. clark , phd , visiting research associate
\\ university of nebraska at omaha - college of IS&T
[[alternative HTML version deleted]]
Jeff Newmiller
2013-Mar-01 17:44 UTC
[R] interactive visualizations - anyone use SVGAnnotation?
Try RStudio's "Shiny".
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Sent from my phone. Please excuse my brevity.
Joseph Clark <joeclark77 at hotmail.com> wrote:
>
>Hi all:I found some great demonstrations of interactive presentation
>graphics generated in R with the SVGAnnotation package,
>here:http://www.omegahat.org/SVGAnnotation/http://www.omegahat.org/SVGAnnotation/SVGAnnotationPaper/SVGAnnotationPaper.htmlI
>tried to install the package available at that website (it's not on
>CRAN) and am getting some pretty uninformative errors (see below). My
>best guess is that the package worked under an earlier version of R but
>is broken now. Do any of you use this package for interactive
>presentation graphics? Or, what are some good alternative libraries?
>I've played around a bit with 'iplots' and RStudio's
'manipulate'
>library, but those are really geared for exploratory analysis. I'm
>looking for something geared toward presentation, for example, on a web
>page. A good "hello,world" I want to accomplish would be a time
series
>with 2 or more line graphs that the viewer can choose between with
>radio buttons or checkboxes.Thanks in advance! The error I get when
>trying to install SVGAnnotation from the file: >
>install.packages("SVGAnnotation_0.93-1.tar.gz",repos=NULL)
>Warning in install.packages :
>package ?SVGAnnotation_0.93-1.tar.gz? is not available (for R version
>2.15.1)
>Installing package(s) into ?C:/Program Files/R/R-2.15.1/library?
>(as ?lib? is unspecified)
>Warning in install.packages :
> error 1 in extracting from zip file
>Warning in install.packages :
>cannot open compressed file
'SVGAnnotation_0.93-1.tar.gz/DESCRIPTION',
>probable reason 'No such file or directory'
>Error in install.packages : cannot open the connection
>
>
>// joseph w. clark , phd , visiting research associate
>\\ university of nebraska at omaha - college of IS&T
> [[alternative HTML version deleted]]
>
>
>
>------------------------------------------------------------------------
>
>______________________________________________
>R-help at r-project.org mailing list
>https://stat.ethz.ch/mailman/listinfo/r-help
>PLEASE do read the posting guide
>http://www.R-project.org/posting-guide.html
>and provide commented, minimal, self-contained, reproducible code.
Martin Morgan
2013-Mar-01 18:21 UTC
[R] interactive visualizations - anyone use SVGAnnotation?
On 3/1/2013 9:12 AM, Joseph Clark wrote:> > Hi all:I found some great demonstrations of interactive presentation graphics generated in R with the SVGAnnotation package, here:http://www.omegahat.org/SVGAnnotation/http://www.omegahat.org/SVGAnnotation/SVGAnnotationPaper/SVGAnnotationPaper.htmlI tried to install the package available at that website (it's not on CRAN) and am getting some pretty uninformative errors (see below). My best guess is that the package worked under an earlier version of R but is broken now. Do any of you use this package for interactive presentation graphics? Or, what are some good alternative libraries? I've played around a bit with 'iplots' and RStudio's 'manipulate' library, but those are really geared for exploratory analysis. I'm looking for something geared toward presentation, for example, on a web page. A good "hello,world" I want to accomplish would be a time series with 2 or more line graphs that the viewer can choose between with radio buttons or checkboxes.Thanks in advance! The erro r I get when trying to install SVGAnnotation from the file: > install.packages("SVGAnnotation_0.93-1.tar.gz",repos=NULL)> Warning in install.packages : > package ?SVGAnnotation_0.93-1.tar.gz? is not available (for R version 2.15.1) > Installing package(s) into ?C:/Program Files/R/R-2.15.1/library? > (as ?lib? is unspecified) > Warning in install.packages : > error 1 in extracting from zip file > Warning in install.packages : > cannot open compressed file 'SVGAnnotation_0.93-1.tar.gz/DESCRIPTION', probable reason 'No such file or directory' > Error in install.packages : cannot open the connectionHi Joseph -- likely you will be able to install with install.packages("path/to/SVGAnnotation_0.93-1.tar.gz", repos=NULL, type="source") I've enjoyed using this package for producing heatmaps that can be moused over and display information about underlying row / column values. Martin> > > // joseph w. clark , phd , visiting research associate > \\ university of nebraska at omaha - college of IS&T > [[alternative HTML version deleted]] > > > > ______________________________________________ > R-help at r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. >-- Dr. Martin Morgan, PhD Fred Hutchinson Cancer Research Center 1100 Fairview Ave. N. PO Box 19024 Seattle, WA 98109
Paul Murrell
2013-Mar-04 20:13 UTC
[R] interactive visualizations - anyone use SVGAnnotation?
Hi An alternative is the 'gridSVG' package http://www.stat.auckland.ac.nz/~paul/gridSVG/gridsvg.pdf Paul On 02/03/13 06:12, Joseph Clark wrote:> > Hi all:I found some great demonstrations of interactive presentation graphics generated in R with the SVGAnnotation package, here:http://www.omegahat.org/SVGAnnotation/http://www.omegahat.org/SVGAnnotation/SVGAnnotationPaper/SVGAnnotationPaper.htmlI tried to install the package available at that website (it's not on CRAN) and am getting some pretty uninformative errors (see below). My best guess is that the package worked under an earlier version of R but is broken now. Do any of you use this package for interactive presentation graphics? Or, what are some good alternative libraries? I've played around a bit with 'iplots' and RStudio's 'manipulate' library, but those are really geared for exploratory analysis. I'm looking for something geared toward presentation, for example, on a web page. A good "hello,world" I want to accomplish would be a time series with 2 or more line graphs that the viewer can choose between with radio buttons or checkboxes.Thanks in advance! The errorI get when trying to install SVGAnnotation from the file: > install.packages("SVGAnnotation_0.93-1.tar.gz",repos=NULL)> Warning in install.packages : > package ?SVGAnnotation_0.93-1.tar.gz? is not available (for R version 2.15.1) > Installing package(s) into ?C:/Program Files/R/R-2.15.1/library? > (as ?lib? is unspecified) > Warning in install.packages : > error 1 in extracting from zip file > Warning in install.packages : > cannot open compressed file 'SVGAnnotation_0.93-1.tar.gz/DESCRIPTION', probable reason 'No such file or directory' > Error in install.packages : cannot open the connection > > > // joseph w. clark , phd , visiting research associate > \\ university of nebraska at omaha - college of IS&T > [[alternative HTML version deleted]] > > > > ______________________________________________ > R-help at r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. >-- Dr Paul Murrell Department of Statistics The University of Auckland Private Bag 92019 Auckland New Zealand 64 9 3737599 x85392 paul at stat.auckland.ac.nz http://www.stat.auckland.ac.nz/~paul/