Bachelor student
2013-Jan-31 09:12 UTC
[R] Addressing results of modFit() of the FME package
Hello, I don?t manage to address the results I get from modFit(). Would be really nice if you could help me to do so. This is my loop: for (i in 1:10) { CO2 <- CO2.list[[i]] #Beobachtungen Obs <- data.frame("x=t"=numeric(),"y=Respi"=numeric()) Obs <- cbind(CO2[,1],CO2[,3]) colnames(Obs) <- c("x","y") Corg.mg <- CO2$Corg.mg Model<-function(p,x) return(data.frame(x=x, y=(p[1]*p[2]*exp((-p[2])*x))+((Corg.mg-p[1])*p[3]*exp((-p[3]*x))))) Residuals<-function(p)(Obs[,2]-Model(p, Obs[,1])$y) print(system.time(P <- modFit(f=Residuals, p=c(300, 0.1, 0.002), lower=c(0,0,0), upper=c(500, 5, 1)))) sP<-summary(P) sP } #sP, gives me the following output. I can address the estimates with P$par but I cannot address Std. Error and Pr(>t). That?s what I would like to do! Parameters: Estimate Std. Error t value Pr(>|t|) [1,] 4.005e+00 2.510e+00 1.595 0.131469 [2,] 1.603e-01 9.442e-02 1.698 0.110100 [3,] 3.647e-04 8.581e-05 4.251 0.000698 *** --- Signif. codes: 0 ?***? 0.001 ?**? 0.01 ?*? 0.05 ?.? 0.1 ? ? 1 Residual standard error: 0.2427 on 15 degrees of freedom Parameter correlation: [,1] [,2] [,3] [1,] 1.0000 -0.9164 -0.7697 [2,] -0.9164 1.0000 0.5599 [3,] -0.7697 0.5599 1.0000 Thanks in advance!! -- View this message in context: http://r.789695.n4.nabble.com/Addressing-results-of-modFit-of-the-FME-package-tp4657140.html Sent from the R help mailing list archive at Nabble.com.