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dysonsphere

2012-Oct-30 18:21 UTC

[R] boxplots of various levels

noob here
trying to make boxplots of some data
i would like to separate the boxplots according to conditons of various
levels
for example:

i have 
group:1 and 2, each group performed tests consisting of
condition A,B,C,D
side: left and right
time: 1 to 10

I would like separate boxplots of the results (x) of the tests (numeric) for
each group under each condition on each side over time.

so far i have set it up like this:
boxplot(test$x~test$time)
this gives me the plot for all vaues of x in each time bin.  basicaly i
would need a command that tells R to include only the data that agrees with
the group, condition, and side I set.
something like 
boxplot(test$x~test$time) where test$group=1,test$condition=A,test$side=left

can this be done?




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Jose Iparraguirre

2012-Oct-31 10:11 UTC

head link

[R] boxplots of various levels

Have a look at this:
http://stats.stackexchange.com/questions/15486/plotting-a-boxplot-against-multiple-factors-in-r-with-ggplot2

Hope it helps.

Jos?


-----Original Message-----
From: r-help-bounces at r-project.org [mailto:r-help-bounces at r-project.org]
On Behalf Of dysonsphere
Sent: 30 October 2012 18:22
To: r-help at r-project.org
Subject: [R] boxplots of various levels

noob here
trying to make boxplots of some data
i would like to separate the boxplots according to conditons of various
levels
for example:

i have 
group:1 and 2, each group performed tests consisting of
condition A,B,C,D
side: left and right
time: 1 to 10

I would like separate boxplots of the results (x) of the tests (numeric) for
each group under each condition on each side over time.

so far i have set it up like this:
boxplot(test$x~test$time)
this gives me the plot for all vaues of x in each time bin.  basicaly i
would need a command that tells R to include only the data that agrees with
the group, condition, and side I set.
something like 
boxplot(test$x~test$time) where test$group=1,test$condition=A,test$side=left

can this be done?




--
View this message in context:
http://r.789695.n4.nabble.com/boxplots-of-various-levels-tp4647917.html
Sent from the R help mailing list archive at Nabble.com.

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John Kane

2012-Oct-31 12:12 UTC

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[R] boxplots of various levels

I am not sure I understand exactly what you want but does this do anything like
what you want?

library(ggplot2)
mydata  <-  data.frame(result = rnorm(100), group = rep(c("1",
"2"), each = 50),
                       side = sample(c("L", "R"), 100,
replace = TRUE) , dtime = rep(1:10, each=10))

p  <-  ggplot(mydata , aes( group, result, fill = side ))+ geom_boxplot() +
                            facet_wrap(~dtime)
p 

John Kane
Kingston ON Canada

> -----Original Message-----
> From: dysonsphere23 at gmail.com
> Sent: Tue, 30 Oct 2012 11:21:49 -0700 (PDT)
> To: r-help at r-project.org
> Subject: [R] boxplots of various levels
> 
> noob here
> trying to make boxplots of some data
> i would like to separate the boxplots according to conditons of various
> levels
> for example:
> 
> i have
> group:1 and 2, each group performed tests consisting of
> condition A,B,C,D
> side: left and right
> time: 1 to 10
> 
> I would like separate boxplots of the results (x) of the tests (numeric)
> for
> each group under each condition on each side over time.
> 
> so far i have set it up like this:
> boxplot(test$x~test$time)
> this gives me the plot for all vaues of x in each time bin.  basicaly i
> would need a command that tells R to include only the data that agrees
> with
> the group, condition, and side I set.
> something like
> boxplot(test$x~test$time) where
> test$group=1,test$condition=A,test$side=left
> 
> can this be done?
> 
> 
> 
> 
> --
> View this message in context:
> http://r.789695.n4.nabble.com/boxplots-of-various-levels-tp4647917.html
> Sent from the R help mailing list archive at Nabble.com.
> 
> ______________________________________________
> R-help at r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide
> http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.
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John Kane

2012-Nov-01 13:34 UTC

head link

[R] boxplots of various levels

Ah nice. I clearly misunderstood and thought that facet_wrap() made sense.  


John Kane
Kingston ON Canada

> -----Original Message-----
> From: ruipbarradas at sapo.pt
> Sent: Wed, 31 Oct 2012 19:45:33 +0000
> To: dysonsphere23 at gmail.com
> Subject: Re: [R] boxplots of various levels
> 
> Hello,
> 
> Like this?
> 
> 
> library(ggplot2)
> set.seed(3101)
> mydata <- data.frame(
>      BRCLNET = rnorm(1000),
>      group = rep(c("1", "2"), each = 500),
>        side = sample(c("Left", "Middle",
"Right"), 1000, replace = TRUE)
> ,
>      dtime = rep(1:10, 100))
> 
> 
> 
> p  <-  ggplot(mydata , aes(factor(dtime), BRCLNET, fill = side)) +
>          geom_boxplot() +
>          facet_grid(group~side)
> p
> 
> 
> Note that it's factor(dtime) and facet_grid(), not facet_wrap()
> 
> Hope this helps,
> 
> Rui Barradas
> Em 31-10-2012 17:33, dysonsphere escreveu:
>> ok this is close, thanks for your effort
>> 
>> i will be more specific about my data set now, maybe that will help.
>> 
>> there are 2 cats, labeled rs29 and rs30
>> there are a number of experimental results, i will make a graph set for
>> each one. for example we can look at the results of BRCLNET.
>> the tasks are devided into right middle and left
>> the tasks are performed over time 1 to 10.
>> 
>> i was a boxplot per cat per side (1 left 1 middle 1 right) over the
time
>> (1
>> to 10)
>> 
>> at this point I have adjusted the code you sent me to this:
>> mydata  <-  data.frame(BRCLNET, cat, side, group)
>> 
>> mydata then gives me a list of 4 columns: BRCLNET, cat, side, time
>> that is perfect
>> 
>> then:
>> ggplot(mydata , aes( group, BRCLNET, fill = cat ))+ geom_boxplot() +
>> +                             facet_wrap(~side)
>> 
>> this gives me a figure divided into 3 columns: LEFT MIDDLE RIGHT
>> with 2 boxes in each (RS29 and RS30). the yaxis is labeled BRCLNET and
>> the
>> xaxis is labeled time. but there is not a separate box for each time
>> point.
>> there are only 2 boxes per plot.
>> 
>> i would like to have six separate plots:
>> 1. LEFT RS29 BRCLNET over time (10 boxes)
>> 2. MIDDLE RS29 BRCLNET overtime (10 boxes)
>> .....
>> 6. RIGHT RS30 BRCLNET over time
>> 
>> thanks for your help
>> 
>> 
>> On Wed, Oct 31, 2012 at 8:16 AM, John Kane [via R] <
>> ml-node+s789695n4647989h85 at n4.nabble.com> wrote:
>> 
>>> I am not sure I understand exactly what you want but does this do
>>> anything
>>> like what you want?
>>> 
>>> library(ggplot2)
>>> mydata  <-  data.frame(result = rnorm(100), group =
rep(c("1", "2"),
>>> each
>>> = 50),
>>>                         side = sample(c("L",
"R"), 100, replace = TRUE)
>>> ,
>>> dtime = rep(1:10, each=10))
>>> 
>>> p  <-  ggplot(mydata , aes( group, result, fill = side ))+
>>> geom_boxplot()
>>> +
>>>                              facet_wrap(~dtime)
>>> p
>>> 
>>> John Kane
>>> Kingston ON Canada
>>> 
>>> 
>>>> -----Original Message-----
>>>> From: [hidden
>>>>
email]<http://user/SendEmail.jtp?type=node&node=4647989&i=0>
>>>> Sent: Tue, 30 Oct 2012 11:21:49 -0700 (PDT)
>>>> To: [hidden
>>>>
email]<http://user/SendEmail.jtp?type=node&node=4647989&i=1>
>>>> Subject: [R] boxplots of various levels
>>>> 
>>>> noob here
>>>> trying to make boxplots of some data
>>>> i would like to separate the boxplots according to conditons of
>>>> various
>>>> levels
>>>> for example:
>>>> 
>>>> i have
>>>> group:1 and 2, each group performed tests consisting of
>>>> condition A,B,C,D
>>>> side: left and right
>>>> time: 1 to 10
>>>> 
>>>> I would like separate boxplots of the results (x) of the tests
>>>> (numeric)
>>>> for
>>>> each group under each condition on each side over time.
>>>> 
>>>> so far i have set it up like this:
>>>> boxplot(test$x~test$time)
>>>> this gives me the plot for all vaues of x in each time bin. 
basicaly
>>>> i
>>>> would need a command that tells R to include only the data that
agrees
>>>> with
>>>> the group, condition, and side I set.
>>>> something like
>>>> boxplot(test$x~test$time) where
>>>> test$group=1,test$condition=A,test$side=left
>>>> 
>>>> can this be done?
>>>> 
>>>> 
>>>> 
>>>> 
>>>> --
>>>> View this message in context:
>>>>
http://r.789695.n4.nabble.com/boxplots-of-various-levels-tp4647917.html
>>>> Sent from the R help mailing list archive at Nabble.com.
>>>> 
>>>> ______________________________________________
>>>> [hidden email]
>>>>
<http://user/SendEmail.jtp?type=node&node=4647989&i=2>mailing list
>>>> https://stat.ethz.ch/mailman/listinfo/r-help
>>>> PLEASE do read the posting guide
>>>> http://www.R-project.org/posting-guide.html
>>>> and provide commented, minimal, self-contained, reproducible
code.
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>> 
>> 
>> 
>> ______________________________________________
>> R-help at r-project.org mailing list
>> https://stat.ethz.ch/mailman/listinfo/r-help
>> PLEASE do read the posting guide
>> http://www.R-project.org/posting-guide.html
>> and provide commented, minimal, self-contained, reproducible code.
> 
> 
> 	[[alternative HTML version deleted]]
> 
> ______________________________________________
> R-help at r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide
> http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.
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