Divya Kakkillaya B
2012-Aug-24 06:45 UTC
[R] Error while installing gsubfn_0.6-4.tar.gz for R 2.15.1
Hi, I am getting the follwoing error while installing gsubfn_0.6-4.tar.gz library for R. R version is 2.15.1 and i am installing on Redhat linux version 2.6.18-238.9.1.el5 (mockbuild at x86-002.build.bos.redhat.com<mailto:mockbuild at x86-002.build.bos.redhat.com>) (gcc version 4.1.2 20080704 (Red Hat 4.1.2-50)) * installing to library ?/home/mapred/installables/R/library? * installing *source* package ?gsubfn? ... ** package ?gsubfn? successfully unpacked and MD5 sums checked ** R ** demo ** inst ** byte-compile and prepare package for lazy loading Warning: S3 methods ?$.tclvar?, ?$<-.tclvar?, ?as.character.tclObj?, ?as.character.tclVar?, ?as.double.tclObj?, ?as.integer.tclObj?, ?as.logical.tclObj?, ?as.raw.tclObj?, ?print.tclObj?, ?[[.tclArray?, ?[[<-.tclArray?, ?$.tclArray?, ?$<-.tclArray?, ?names.tclArray?, ?names<-.tclArray?, ?length.tclArray?, ?length<-.tclArray?, ?tclObj.tclVar?, ?tclObj<-.tclVar?, ?tclvalue.default?, ?tclvalue.tclObj?, ?tclvalue.tclVar?, ?tclvalue<-.default?, ?tclvalue<-.tclVar?, ?close.tkProgressBar? were declared in NAMESPACE but not found Error : .onLoad failed in loadNamespace() for 'tcltk', details: call: fun(libname, pkgname) error: Tcl/Tk support is not available on this system Error : package/namespace load failed for ?tcltk? Error : unable to load R code in package ?gsubfn? ERROR: lazy loading failed for package ?gsubfn? Regards, Divya **************** CAUTION - Disclaimer ***************** This e-mail contains PRIVILEGED AND CONFIDENTIAL INFORMATION intended solely for the use of the addressee(s). If you are not the intended recipient, please notify the sender by e-mail and delete the original message. Further, you are not to copy, disclose, or distribute this e-mail or its contents to any other person and any such actions are unlawful. This e-mail may contain viruses. Infosys has taken every reasonable precaution to minimize this risk, but is not liable for any damage you may sustain as a result of any virus in this e-mail. You should carry out your own virus checks before opening the e-mail or attachment. Infosys reserves the right to monitor and review the content of all messages sent to or from this e-mail address. Messages sent to or from this e-mail address may be stored on the Infosys e-mail system. ***INFOSYS******** End of Disclaimer ********INFOSYS***
Gabor Grothendieck
2012-Aug-24 12:59 UTC
[R] Error while installing gsubfn_0.6-4.tar.gz for R 2.15.1
I have never seen that before. It has been independently verified that gsubfn works on Fedora Red Hat as you can see here: http://cran.r-project.org/web/checks/check_results_gsubfn.html The message about Tcl/Tk in your log suggests that there is something wrong with your version of R itself. See FAQ2: http://code.google.com/p/gsubfn/#FAQs Given that its been independently verified to install properly on fedora red hat and that your log shows that your version of R is broken you may need to get a proper version of R. The following things may not be sufficient given the above but you could try it just in case: options(gsubfn.engine = FALSE) install.packages("gsubfn") # do NOT use dep=TRUE Let me know when you resolve it so we can add something to the FAQ. Regards. On Fri, Aug 24, 2012 at 2:45 AM, Divya Kakkillaya B <Divya_B08 at infosys.com> wrote:> Hi, > > I am getting the follwoing error while installing gsubfn_0.6-4.tar.gz library for R. R version is 2.15.1 and i am installing on Redhat linux version 2.6.18-238.9.1.el5 (mockbuild at x86-002.build.bos.redhat.com<mailto:mockbuild at x86-002.build.bos.redhat.com>) (gcc version 4.1.2 20080704 (Red Hat 4.1.2-50)) > > > > * installing to library ?/home/mapred/installables/R/library? > * installing *source* package ?gsubfn? ... > ** package ?gsubfn? successfully unpacked and MD5 sums checked > ** R > ** demo > ** inst > ** byte-compile and prepare package for lazy loading > Warning: S3 methods ?$.tclvar?, ?$<-.tclvar?, ?as.character.tclObj?, ?as.character.tclVar?, ?as.double.tclObj?, ?as.integer.tclObj?, ?as.logical.tclObj?, ?as.raw.tclObj?, ?print.tclObj?, ?[[.tclArray?, ?[[<-.tclArray?, ?$.tclArray?, ?$<-.tclArray?, ?names.tclArray?, ?names<-.tclArray?, ?length.tclArray?, ?length<-.tclArray?, ?tclObj.tclVar?, ?tclObj<-.tclVar?, ?tclvalue.default?, ?tclvalue.tclObj?, ?tclvalue.tclVar?, ?tclvalue<-.default?, ?tclvalue<-.tclVar?, ?close.tkProgressBar? were declared in NAMESPACE but not found > Error : .onLoad failed in loadNamespace() for 'tcltk', details: > call: fun(libname, pkgname) > error: Tcl/Tk support is not available on this system > Error : package/namespace load failed for ?tcltk? > Error : unable to load R code in package ?gsubfn? > ERROR: lazy loading failed for package ?gsubfn? > > > > Regards, > Divya > > **************** CAUTION - Disclaimer ***************** > This e-mail contains PRIVILEGED AND CONFIDENTIAL INFORMATION intended solely > for the use of the addressee(s). If you are not the intended recipient, please > notify the sender by e-mail and delete the original message. Further, you are not > to copy, disclose, or distribute this e-mail or its contents to any other person and > any such actions are unlawful. This e-mail may contain viruses. Infosys has taken > every reasonable precaution to minimize this risk, but is not liable for any damage > you may sustain as a result of any virus in this e-mail. You should carry out your > own virus checks before opening the e-mail or attachment. Infosys reserves the > right to monitor and review the content of all messages sent to or from this e-mail > address. Messages sent to or from this e-mail address may be stored on the > Infosys e-mail system. > ***INFOSYS******** End of Disclaimer ********INFOSYS*** > > ______________________________________________ > R-help at r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code.-- Statistics & Software Consulting GKX Group, GKX Associates Inc. tel: 1-877-GKX-GROUP email: ggrothendieck at gmail.com