R help - Mar 2012 - Correlation analysis for an exon array

Dear All,
I have an exon array and did not find any differential gene expression between
two samples. I was looking to perform correlation analysis on the same. Can
anyone recommend any package that would do this for an affy exon array?

Will SAM analysis give me correlated genes?

Thanks and regards,
Ekta
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This question seems more suited to the Bioconductor mailing list:
you'll get specialized (and very good) help if you post there.

Michael

On Thu, Mar 8, 2012 at 6:22 AM, Ekta Jain <Ekta_Jain at
jubilantbiosys.com> wrote:
> Dear All,
> I have an exon array and did not find any differential gene expression
between two samples. I was looking to perform correlation analysis on the same.
Can anyone recommend any package that would do this for an affy exon array?
>
> Will SAM analysis give me correlated genes?
>
> Thanks and regards,
> Ekta
> The information contained in this electronic message and in any attachments
to this message is confidential, legally privileged and intended only for use by
the person or entity to which this electronic message is addressed. If you are
not the intended recipient, and have received this message in error, please
notify the sender and system manager by return email and delete the message and
its attachments and also you are hereby notified that any distribution, copying,
review, retransmission, dissemination or other use of this electronic
transmission or the information contained in it is strictly prohibited. Please
note that any views or opinions presented in this email are solely those of the
author and may not represent those of the Company or bind the Company. Any
commitments made over e-mail are not financially binding on the company unless
accompanied or followed by a valid purchase order. This message has been scanned
for viruses and dangerous content by Mail Scanner, a!
> ?nd is believed to be clean. The Company accepts no liability for any
damage caused by any virus transmitted by this email.
> www.jubl.com
>
> ? ? ? ?[[alternative HTML version deleted]]
>
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